RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 SLF2Q8IX21 1173 aa18.76■□□□□ 0.59
PHF1-211ENST00000495509 EPB41L4AQ9HCS5 686 aaPredicted RBP18.76■□□□□ 0.59
PHF1-211ENST00000495509 U3KPZ7 1027 aaPredicted RBP18.76■□□□□ 0.59
PHF1-211ENST00000495509 SLC27A2O14975 620 aa18.75■□□□□ 0.59
PHF1-211ENST00000495509 CRKP46108 304 aa18.75■□□□□ 0.59
PHF1-211ENST00000495509 IFNL3Q8IZI9 196 aa18.75■□□□□ 0.59
PHF1-211ENST00000495509 MCCP23508 829 aa18.74■□□□□ 0.59
PHF1-211ENST00000495509 TNIP1Q15025 636 aa18.74■□□□□ 0.59
PHF1-211ENST00000495509 HHIPL2Q6UWX4 724 aa18.74■□□□□ 0.59
PHF1-211ENST00000495509 TEKT1Q969V4 418 aa18.74■□□□□ 0.59
PHF1-211ENST00000495509 SNX14Q9Y5W7 946 aa18.74■□□□□ 0.59
PHF1-211ENST00000495509 ZNF541Q9H0D2 1346 aa18.74■□□□□ 0.59
PHF1-211ENST00000495509 BAG3O95817 575 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 GNAT2P19087 354 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
PHF1-211ENST00000495509 APOBEC3HQ6NTF7 200 aaKnown RBP18.73■□□□□ 0.59
PHF1-211ENST00000495509 NOL10Q9BSC4 688 aaKnown RBP18.73■□□□□ 0.59
PHF1-211ENST00000495509 MRIQ9BWK5 157 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 RNF181Q9P0P0 153 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 GJA3Q9Y6H8 435 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 BAZ2AQ9UIF9 1905 aaKnown RBP18.73■□□□□ 0.59
PHF1-211ENST00000495509 SHTN1A0MZ66 631 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 CYP21A2P08686 494 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 RBM5P52756 815 aaKnown RBP eCLIP18.73■□□□□ 0.59
PHF1-211ENST00000495509 RHBDL3P58872 404 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 AGBL3Q8NEM8 1001 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 KCNB2Q92953 911 aa18.73■□□□□ 0.59
PHF1-211ENST00000495509 CRNKL1Q9BZJ0 848 aaKnown RBP18.73■□□□□ 0.59
PHF1-211ENST00000495509 MYO3BQ8WXR4 1341 aa18.72■□□□□ 0.59
PHF1-211ENST00000495509 HDLBPQ00341 1268 aaKnown RBP18.72■□□□□ 0.59
PHF1-211ENST00000495509 C9orf131Q5VYM1 1079 aa18.72■□□□□ 0.59
PHF1-211ENST00000495509 ZDHHC15Q96MV8 337 aa18.72■□□□□ 0.59
PHF1-211ENST00000495509 SERPINA10Q9UK55 444 aa18.72■□□□□ 0.59
PHF1-211ENST00000495509 USP17L8P0C7I0 530 aa18.71■□□□□ 0.59
PHF1-211ENST00000495509 HAND2P61296 217 aa18.71■□□□□ 0.59
PHF1-211ENST00000495509 COL9A3Q14050 684 aaPredicted RBP18.71■□□□□ 0.59
PHF1-211ENST00000495509 ALX1Q15699 326 aa18.71■□□□□ 0.59
PHF1-211ENST00000495509 CDK5RAP2Q96SN8 1893 aa18.71■□□□□ 0.59
PHF1-211ENST00000495509 SMIM22K7EJ46 135 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 GMPSP49915 693 aaPredicted RBP18.7■□□□□ 0.58
PHF1-211ENST00000495509 ADCK5Q3MIX3 580 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 CFAP100Q494V2 611 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 TGFBRAP1Q8WUH2 860 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 DCP1AQ9NPI6 582 aaPredicted RBP18.7■□□□□ 0.58
PHF1-211ENST00000495509 USP40Q9NVE5 1235 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 TDO2P48775 406 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 CDC42EP5Q6NZY7 148 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 TEX11Q8IYF3 940 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 OGFOD1Q8N543 542 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 PRMT6Q96LA8 375 aaPredicted RBP18.7■□□□□ 0.58
PHF1-211ENST00000495509 NAPBQ9H115 298 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 CTNNA3Q9UI47 895 aa18.7■□□□□ 0.58
PHF1-211ENST00000495509 GRIN3BO60391 1043 aa18.69■□□□□ 0.58
PHF1-211ENST00000495509 ANAPC15P60006 121 aa18.69■□□□□ 0.58
PHF1-211ENST00000495509 EVX2Q03828 476 aa18.69■□□□□ 0.58
PHF1-211ENST00000495509 RNF20Q5VTR2 975 aa18.69■□□□□ 0.58
PHF1-211ENST00000495509 NACAP1Q9BZK3 213 aa18.69■□□□□ 0.58
PHF1-211ENST00000495509 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
PHF1-211ENST00000495509 MKRN1Q9UHC7 482 aaKnown RBP18.69■□□□□ 0.58
PHF1-211ENST00000495509 CYP2D7A0A087X1C5 515 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 ZKSCAN1P17029 563 aaPredicted RBP18.68■□□□□ 0.58
PHF1-211ENST00000495509 USP5P45974 858 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 STOX1Q6ZVD7 989 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 MAPKAPK5Q8IW41 473 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 IL17RAQ96F46 866 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 RPAP1Q9BWH6 1393 aaPredicted RBP18.68■□□□□ 0.58
PHF1-211ENST00000495509 ATP8A2Q9NTI2 1148 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 USP17L12C9JPN9 530 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 USP17L21D6R901 530 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 ZNF213O14771 459 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 CPA1P15085 419 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 PLCG2P16885 1265 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 IMMTQ16891 758 aaKnown RBP18.68■□□□□ 0.58
PHF1-211ENST00000495509 TSGA10IPQ3SY00 556 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 CTR9Q6PD62 1173 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 TDRD3Q9H7E2 651 aaKnown RBP18.68■□□□□ 0.58
PHF1-211ENST00000495509 INCENPQ9NQS7 918 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 HDAC9Q9UKV0 1011 aa18.68■□□□□ 0.58
PHF1-211ENST00000495509 WDHD1O75717 1129 aaPredicted RBP18.67■□□□□ 0.58
PHF1-211ENST00000495509 RPS12P25398 132 aaKnown RBP18.67■□□□□ 0.58
PHF1-211ENST00000495509 CACNB3P54284 484 aa18.67■□□□□ 0.58
PHF1-211ENST00000495509 CTDSPL2Q05D32 466 aa18.67■□□□□ 0.58
PHF1-211ENST00000495509 SLC4A8Q2Y0W8 1093 aa18.67■□□□□ 0.58
PHF1-211ENST00000495509 JAKMIP1Q96N16 626 aaKnown RBP18.67■□□□□ 0.58
PHF1-211ENST00000495509 UPF3BQ9BZI7 483 aaKnown RBP18.67■□□□□ 0.58
PHF1-211ENST00000495509 CNOT7Q9UIV1 285 aaKnown RBP18.67■□□□□ 0.58
PHF1-211ENST00000495509 TACC3Q9Y6A5 838 aa18.67■□□□□ 0.58
PHF1-211ENST00000495509 ZMYM6O95789 1325 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 SPDYE2BA6NHP3 402 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 MINDY4BA8MYZ0 360 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 DDNO94850 711 aaPredicted RBP18.66■□□□□ 0.58
PHF1-211ENST00000495509 EGFRP00533 1210 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 SPDYE6P0CI01 402 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 CYP2D6P10635 497 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 DLGAP5Q15398 846 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 GIMAP6Q6P9H5 292 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 CERS3Q8IU89 383 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 STK11IPQ8N1F8 1099 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 DPF2Q92785 391 aa18.66■□□□□ 0.58
PHF1-211ENST00000495509 DDX4Q9NQI0 724 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms