RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 AKAP2Q9Y2D5 859 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 SUGT1Q9Y2Z0 365 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
NELFE-213ENST00000494956 TM4SF4P48230 202 aa13.12□□□□□ -0.31
NELFE-213ENST00000494956 TNNI2P48788 182 aa13.12□□□□□ -0.31
NELFE-213ENST00000494956 DGKZQ13574 1117 aa13.12□□□□□ -0.31
NELFE-213ENST00000494956 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.12□□□□□ -0.31
NELFE-213ENST00000494956 ZFPM1Q8IX07 1006 aa13.12□□□□□ -0.31
NELFE-213ENST00000494956 MCOLN1Q9GZU1 580 aa13.12□□□□□ -0.31
NELFE-213ENST00000494956 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
NELFE-213ENST00000494956 LAMB1P07942 1786 aa13.12□□□□□ -0.31
NELFE-213ENST00000494956 SALL1Q9NSC2 1324 aa13.12□□□□□ -0.31
NELFE-213ENST00000494956 SEMA3EO15041 775 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
NELFE-213ENST00000494956 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 MIGA2Q7L4E1 593 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 ZNF384Q8TF68 577 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 DBNDD2Q9BQY9 259 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 FAM198AQ9UFP1 575 aa13.11□□□□□ -0.31
NELFE-213ENST00000494956 IGF2BP3O00425 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
NELFE-213ENST00000494956 MCAMP43121 646 aa13.1□□□□□ -0.31
NELFE-213ENST00000494956 VGLL4Q14135 290 aa13.1□□□□□ -0.31
NELFE-213ENST00000494956 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
NELFE-213ENST00000494956 TNNI3KQ59H18 835 aa13.1□□□□□ -0.31
NELFE-213ENST00000494956 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
NELFE-213ENST00000494956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.1□□□□□ -0.31
NELFE-213ENST00000494956 OPTNQ96CV9 577 aa13.1□□□□□ -0.31
NELFE-213ENST00000494956 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
NELFE-213ENST00000494956 TLR7Q9NYK1 1049 aaKnown RBP13.1□□□□□ -0.31
NELFE-213ENST00000494956 COG6Q9Y2V7 657 aa13.1□□□□□ -0.31
NELFE-213ENST00000494956 FPGT-TNNI3KV9GXZ4 949 aa13.1□□□□□ -0.31
NELFE-213ENST00000494956 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
NELFE-213ENST00000494956 MAP3K9P80192 1104 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 MECOMQ03112 1051 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 SREBF2Q12772 1141 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 FAM83AQ86UY5 434 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
NELFE-213ENST00000494956 IFNL1Q8IU54 200 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
NELFE-213ENST00000494956 SPATA5Q8NB90 893 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 ZNF296Q8WUU4 475 aaPredicted RBP13.09□□□□□ -0.31
NELFE-213ENST00000494956 ZKSCAN4Q969J2 545 aaPredicted RBP13.09□□□□□ -0.31
NELFE-213ENST00000494956 PTPN18Q99952 460 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 CCDC8Q9H0W5 538 aaPredicted RBP13.09□□□□□ -0.31
NELFE-213ENST00000494956 RCAN3Q9UKA8 241 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 EXOC6BQ9Y2D4 811 aa13.09□□□□□ -0.31
NELFE-213ENST00000494956 CCDC85CA6NKD9 419 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 ZBTB48P10074 688 aaPredicted RBP13.08□□□□□ -0.32
NELFE-213ENST00000494956 INPP5BP32019 993 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 BTDP43251 543 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 ERICH6Q7L0X2 663 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 FAM151AQ8WW52 585 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 WRNIP1Q96S55 665 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
NELFE-213ENST00000494956 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
NELFE-213ENST00000494956 SNCAIPQ9Y6H5 919 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 GAKO14976 1311 aa13.08□□□□□ -0.32
NELFE-213ENST00000494956 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
NELFE-213ENST00000494956 MANSC4A6NHS7 340 aaPredicted RBP13.07□□□□□ -0.32
NELFE-213ENST00000494956 GPR25O00155 361 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 RGS3P49796 1198 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 FKBP1CQ5VVH2 108 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 SH3BP5LQ7L8J4 393 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 ZGPATQ8N5A5 531 aaKnown RBP13.07□□□□□ -0.32
NELFE-213ENST00000494956 EAF2Q96CJ1 260 aaPredicted RBP13.07□□□□□ -0.32
NELFE-213ENST00000494956 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
NELFE-213ENST00000494956 NDUFB9Q9Y6M9 179 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 MROH7-TTC4A0A0A0MT08 1334 aa13.07□□□□□ -0.32
NELFE-213ENST00000494956 RPAP1Q9BWH6 1393 aaPredicted RBP13.07□□□□□ -0.32
NELFE-213ENST00000494956 APBB1O00213 710 aa13.06□□□□□ -0.32
NELFE-213ENST00000494956 PICALMQ13492 652 aa13.06□□□□□ -0.32
NELFE-213ENST00000494956 SIRT2Q8IXJ6 389 aa13.06□□□□□ -0.32
NELFE-213ENST00000494956 NSUN4Q96CB9 384 aaKnown RBP13.06□□□□□ -0.32
NELFE-213ENST00000494956 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
NELFE-213ENST00000494956 CSADQ9Y600 493 aa13.06□□□□□ -0.32
NELFE-213ENST00000494956 RFX7Q2KHR2 1363 aa13.06□□□□□ -0.32
NELFE-213ENST00000494956 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
NELFE-213ENST00000494956 UNCXA6NJT0 531 aa13.05□□□□□ -0.32
NELFE-213ENST00000494956 WDHD1O75717 1129 aaPredicted RBP13.05□□□□□ -0.32
NELFE-213ENST00000494956 ZAP70P43403 619 aa13.05□□□□□ -0.32
NELFE-213ENST00000494956 RHBDL3P58872 404 aa13.05□□□□□ -0.32
NELFE-213ENST00000494956 SPTY2D1Q68D10 685 aaPredicted RBP13.05□□□□□ -0.32
NELFE-213ENST00000494956 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
NELFE-213ENST00000494956 IL1RAPL2Q9NP60 686 aa13.05□□□□□ -0.32
NELFE-213ENST00000494956 GPR108Q9NPR9 543 aa13.05□□□□□ -0.32
NELFE-213ENST00000494956 CDK5RAP2Q96SN8 1893 aa13.05□□□□□ -0.32
NELFE-213ENST00000494956 GPR75-ASB3A0A0A6YYF3 556 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 CCL15-CCL14A0A0B4J2E2 113 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 SPDYE5A6NIY4 337 aa13.04□□□□□ -0.32
NELFE-213ENST00000494956 CYP2E1P05181 493 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms