RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 AKAP11Q9UKA4 1901 aa40.88■■■■■ 4.13
CBX4-203ENST00000494546 ARID4AP29374 1257 aaPredicted RBP40.87■■■■■ 4.13
CBX4-203ENST00000494546 USP40Q9NVE5 1235 aa40.87■■■■■ 4.13
CBX4-203ENST00000494546 DDX19BQ9UMR2 479 aa40.87■■■■■ 4.13
CBX4-203ENST00000494546 WNK4Q96J92 1243 aa40.86■■■■■ 4.13
CBX4-203ENST00000494546 UQCRFS1P1P0C7P4 283 aa40.85■■■■■ 4.13
CBX4-203ENST00000494546 TM4SF4P48230 202 aa40.85■■■■■ 4.13
CBX4-203ENST00000494546 SREBF2Q12772 1141 aa40.85■■■■■ 4.13
CBX4-203ENST00000494546 ERICH6Q7L0X2 663 aa40.85■■■■■ 4.13
CBX4-203ENST00000494546 DBNDD2Q9BQY9 259 aa40.85■■■■■ 4.13
CBX4-203ENST00000494546 MCAMP43121 646 aa40.83■■■■■ 4.13
CBX4-203ENST00000494546 TCP10Q12799 353 aa40.83■■■■■ 4.13
CBX4-203ENST00000494546 CCDC158Q5M9N0 1113 aa40.83■■■■■ 4.13
CBX4-203ENST00000494546 TTC39AQ5SRH9 613 aa40.83■■■■■ 4.13
CBX4-203ENST00000494546 SLF2Q8IX21 1173 aa40.83■■■■■ 4.13
CBX4-203ENST00000494546 ZBTB48P10074 688 aaPredicted RBP40.82■■■■■ 4.13
CBX4-203ENST00000494546 NFIAQ12857 509 aa40.82■■■■■ 4.13
CBX4-203ENST00000494546 TBC1D9Q6ZT07 1266 aa40.82■■■■■ 4.13
CBX4-203ENST00000494546 ELP3Q9H9T3 547 aa40.82■■■■■ 4.13
CBX4-203ENST00000494546 EXOC6BQ9Y2D4 811 aa40.82■■■■■ 4.13
CBX4-203ENST00000494546 GAKO14976 1311 aa40.82■■■■■ 4.13
CBX4-203ENST00000494546 MECOMQ03112 1051 aa40.81■■■■■ 4.12
CBX4-203ENST00000494546 FAM151AQ8WW52 585 aa40.81■■■■■ 4.12
CBX4-203ENST00000494546 HOOK2Q96ED9 719 aa40.81■■■■■ 4.12
CBX4-203ENST00000494546 RPAP1Q9BWH6 1393 aaPredicted RBP40.8■■■■■ 4.12
CBX4-203ENST00000494546 ZBTB40Q9NUA8 1239 aa40.8■■■■■ 4.12
CBX4-203ENST00000494546 CASP8AP2Q9UKL3 1982 aa40.8■■■■■ 4.12
CBX4-203ENST00000494546 MANSC4A6NHS7 340 aaPredicted RBP40.79■■■■■ 4.12
CBX4-203ENST00000494546 MAP3K9P80192 1104 aa40.79■■■■■ 4.12
CBX4-203ENST00000494546 PPP1R3FQ6ZSY5 799 aaPredicted RBP40.79■■■■■ 4.12
CBX4-203ENST00000494546 GOLGA6L2Q8N9W4 650 aaPredicted RBP40.79■■■■■ 4.12
CBX4-203ENST00000494546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP40.79■■■■■ 4.125e-8■■■■□ 20.7
CBX4-203ENST00000494546 MYH2Q9UKX2 1941 aa40.79■■■■■ 4.12
CBX4-203ENST00000494546 SNRKQ9NRH2 765 aa40.78■■■■■ 4.12
CBX4-203ENST00000494546 RAI14Q9P0K7 980 aa40.78■■■■■ 4.12
CBX4-203ENST00000494546 OTOFQ9HC10 1997 aa40.77■■■■■ 4.12
CBX4-203ENST00000494546 GJA5P36382 358 aa40.77■■■■■ 4.12
CBX4-203ENST00000494546 VGLL4Q14135 290 aa40.77■■■■■ 4.12
CBX4-203ENST00000494546 C20orf194Q5TEA3 1177 aa40.77■■■■■ 4.12
CBX4-203ENST00000494546 FAM163AQ96GL9 167 aaPredicted RBP40.77■■■■■ 4.12
CBX4-203ENST00000494546 CCDC8Q9H0W5 538 aaPredicted RBP40.77■■■■■ 4.12
CBX4-203ENST00000494546 CHMP4BQ9H444 224 aaKnown RBP40.77■■■■■ 4.12
CBX4-203ENST00000494546 FAM198AQ9UFP1 575 aa40.77■■■■■ 4.12
CBX4-203ENST00000494546 CSADQ9Y600 493 aa40.77■■■■■ 4.12
CBX4-203ENST00000494546 MROH7-TTC4A0A0A0MT08 1334 aa40.76■■■■■ 4.12
CBX4-203ENST00000494546 TBC1D8O95759 1140 aa40.76■■■■■ 4.12
CBX4-203ENST00000494546 BTDP43251 543 aa40.76■■■■■ 4.12
CBX4-203ENST00000494546 ERC1Q8IUD2 1116 aa40.76■■■■■ 4.12
CBX4-203ENST00000494546 RPAP2Q8IXW5 612 aaPredicted RBP40.76■■■■■ 4.12
CBX4-203ENST00000494546 EAF2Q96CJ1 260 aaPredicted RBP40.76■■■■■ 4.12
CBX4-203ENST00000494546 OPTNQ96CV9 577 aa40.76■■■■■ 4.12
CBX4-203ENST00000494546 TLR7Q9NYK1 1049 aaKnown RBP40.76■■■■■ 4.12
CBX4-203ENST00000494546 DBNLQ9UJU6 430 aaKnown RBP40.76■■■■■ 4.12
CBX4-203ENST00000494546 DCAF15Q66K64 600 aa40.75■■■■■ 4.11
CBX4-203ENST00000494546 MIGA2Q7L4E1 593 aa40.75■■■■■ 4.11
CBX4-203ENST00000494546 WRNIP1Q96S55 665 aa40.75■■■■■ 4.11
CBX4-203ENST00000494546 LRP2BPQ9P2M1 347 aa40.75■■■■■ 4.11
CBX4-203ENST00000494546 INHBEP58166 350 aa40.74■■■■■ 4.11
CBX4-203ENST00000494546 PDE3AQ14432 1141 aa40.74■■■■■ 4.11
CBX4-203ENST00000494546 ZNF384Q8TF68 577 aa40.74■■■■■ 4.11
CBX4-203ENST00000494546 GSTO1P78417 241 aa40.73■■■■■ 4.11
CBX4-203ENST00000494546 HSP90AB4PQ58FF6 505 aa40.73■■■■■ 4.11
CBX4-203ENST00000494546 NSUN4Q96CB9 384 aaKnown RBP40.73■■■■■ 4.11
CBX4-203ENST00000494546 HMMRO75330 724 aa40.72■■■■■ 4.11
CBX4-203ENST00000494546 RGS3P49796 1198 aa40.72■■■■■ 4.11
CBX4-203ENST00000494546 ZFPM1Q8IX07 1006 aa40.72■■■■■ 4.11
CBX4-203ENST00000494546 LDHCP07864 332 aa40.71■■■■■ 4.11
CBX4-203ENST00000494546 CNKSR2Q8WXI2 1034 aa40.71■■■■■ 4.11
CBX4-203ENST00000494546 IDI2Q9BXS1 227 aa40.71■■■■■ 4.11
CBX4-203ENST00000494546 ZNF341Q9BYN7 854 aa40.71■■■■■ 4.11
CBX4-203ENST00000494546 GPR75-ASB3A0A0A6YYF3 556 aa40.7■■■■■ 4.11
CBX4-203ENST00000494546 IFNL1Q8IU54 200 aa40.7■■■■■ 4.11
CBX4-203ENST00000494546 ABHD8Q96I13 439 aa40.7■■■■■ 4.11
CBX4-203ENST00000494546 ZNF512BQ96KM6 892 aaPredicted RBP40.7■■■■■ 4.11
CBX4-203ENST00000494546 DGKZQ13574 1117 aa40.69■■■■■ 4.1
CBX4-203ENST00000494546 AACSQ86V21 672 aa40.69■■■■■ 4.1
CBX4-203ENST00000494546 SIRT2Q8IXJ6 389 aa40.69■■■■■ 4.1
CBX4-203ENST00000494546 ZKSCAN4Q969J2 545 aaPredicted RBP40.69■■■■■ 4.1
CBX4-203ENST00000494546 ENTPD3O75355 529 aa40.68■■■■■ 4.1
CBX4-203ENST00000494546 ALDH1A1P00352 501 aa40.68■■■■■ 4.1
CBX4-203ENST00000494546 OTUD5Q96G74 571 aa40.68■■■■■ 4.1
CBX4-203ENST00000494546 IL1RAPL2Q9NP60 686 aa40.68■■■■■ 4.1
CBX4-203ENST00000494546 APBB1O00213 710 aa40.67■■■■■ 4.1
CBX4-203ENST00000494546 WDHD1O75717 1129 aaPredicted RBP40.67■■■■■ 4.1
CBX4-203ENST00000494546 PICALMQ13492 652 aa40.67■■■■■ 4.1
CBX4-203ENST00000494546 RHPN1Q8TCX5 695 aa40.67■■■■■ 4.1
CBX4-203ENST00000494546 MCOLN1Q9GZU1 580 aa40.67■■■■■ 4.1
CBX4-203ENST00000494546 SNCAIPQ9Y6H5 919 aa40.67■■■■■ 4.1
CBX4-203ENST00000494546 RFX7Q2KHR2 1363 aa40.66■■■■■ 4.1
CBX4-203ENST00000494546 AK9Q5TCS8 1911 aa40.66■■■■■ 4.1
CBX4-203ENST00000494546 IGF2BP3O00425 579 aaKnown RBP eCLIP40.66■■■■■ 4.1
CBX4-203ENST00000494546 CYP2E1P05181 493 aaPredicted RBP40.66■■■■■ 4.1
CBX4-203ENST00000494546 ZAP70P43403 619 aa40.66■■■■■ 4.1
CBX4-203ENST00000494546 ZSCAN29Q8IWY8 852 aaPredicted RBP40.65■■■■■ 4.1
CBX4-203ENST00000494546 DDX4Q9NQI0 724 aaKnown RBP40.65■■■■■ 4.1
CBX4-203ENST00000494546 RHBDL3P58872 404 aa40.64■■■■■ 4.1
CBX4-203ENST00000494546 SPDYE5A6NIY4 337 aa40.63■■■■■ 4.09
CBX4-203ENST00000494546 INPP5BP32019 993 aa40.63■■■■■ 4.09
CBX4-203ENST00000494546 R3HDMLQ9H3Y0 253 aa40.63■■■■■ 4.09
CBX4-203ENST00000494546 GPR25O00155 361 aa40.62■■■■■ 4.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms