RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 CDC42EP5Q6NZY7 148 aa26.88■■□□□ 1.89
HPS3-207ENST00000494327 TEPSINQ96N21 525 aa26.88■■□□□ 1.89
HPS3-207ENST00000494327 IL1RAPL2Q9NP60 686 aa26.88■■□□□ 1.89
HPS3-207ENST00000494327 USP40Q9NVE5 1235 aa26.88■■□□□ 1.89
HPS3-207ENST00000494327 THSD7BQ9C0I4 1608 aa26.87■■□□□ 1.89
HPS3-207ENST00000494327 MKRN3Q13064 507 aaKnown RBP26.87■■□□□ 1.89
HPS3-207ENST00000494327 LDLRAD1Q5T700 205 aa26.87■■□□□ 1.89
HPS3-207ENST00000494327 AACSQ86V21 672 aa26.87■■□□□ 1.89
HPS3-207ENST00000494327 SLF2Q8IX21 1173 aa26.87■■□□□ 1.89
HPS3-207ENST00000494327 RHPN1Q8TCX5 695 aa26.87■■□□□ 1.89
HPS3-207ENST00000494327 RAI14Q9P0K7 980 aa26.87■■□□□ 1.89
HPS3-207ENST00000494327 USP2O75604 605 aaPredicted RBP26.86■■□□□ 1.89
HPS3-207ENST00000494327 LBX1P52954 281 aa26.86■■□□□ 1.89
HPS3-207ENST00000494327 RRP1P56182 461 aaKnown RBP26.86■■□□□ 1.89
HPS3-207ENST00000494327 MECOMQ03112 1051 aa26.86■■□□□ 1.89
HPS3-207ENST00000494327 TSKSQ9UJT2 592 aa26.86■■□□□ 1.89
HPS3-207ENST00000494327 IREB2P48200 963 aaKnown RBP26.85■■□□□ 1.89
HPS3-207ENST00000494327 TCP10Q12799 353 aa26.85■■□□□ 1.89
HPS3-207ENST00000494327 MAP3K11Q16584 847 aa26.85■■□□□ 1.89
HPS3-207ENST00000494327 FKBP1CQ5VVH2 108 aa26.85■■□□□ 1.89
HPS3-207ENST00000494327 FAM83AQ86UY5 434 aa26.85■■□□□ 1.89
HPS3-207ENST00000494327 SLC10A4Q96EP9 437 aa26.85■■□□□ 1.89
HPS3-207ENST00000494327 LRP2BPQ9P2M1 347 aa26.85■■□□□ 1.89
HPS3-207ENST00000494327 HSPA8P11142 646 aaKnown RBP26.84■■□□□ 1.89
HPS3-207ENST00000494327 KIF1BPQ96EK5 621 aa26.84■■□□□ 1.89
HPS3-207ENST00000494327 CLMNQ96JQ2 1002 aa26.83■■□□□ 1.89
HPS3-207ENST00000494327 CSRNP1Q96S65 589 aa26.83■■□□□ 1.89
HPS3-207ENST00000494327 GAKO14976 1311 aa26.83■■□□□ 1.89
HPS3-207ENST00000494327 BTDP43251 543 aa26.82■■□□□ 1.88
HPS3-207ENST00000494327 ZAP70P43403 619 aa26.82■■□□□ 1.88
HPS3-207ENST00000494327 NFIAQ12857 509 aa26.82■■□□□ 1.88
HPS3-207ENST00000494327 CLASRPQ8N2M8 674 aaKnown RBP26.82■■□□□ 1.88
HPS3-207ENST00000494327 FAM163AQ96GL9 167 aaPredicted RBP26.82■■□□□ 1.88
HPS3-207ENST00000494327 ZNF512BQ96KM6 892 aaPredicted RBP26.82■■□□□ 1.88
HPS3-207ENST00000494327 RAB11FIP3O75154 756 aa26.81■■□□□ 1.88
HPS3-207ENST00000494327 LDHCP07864 332 aa26.81■■□□□ 1.88
HPS3-207ENST00000494327 GSTO1P78417 241 aa26.81■■□□□ 1.88
HPS3-207ENST00000494327 ZNF384Q8TF68 577 aa26.81■■□□□ 1.88
HPS3-207ENST00000494327 FAM151AQ8WW52 585 aa26.81■■□□□ 1.88
HPS3-207ENST00000494327 NSUN4Q96CB9 384 aaKnown RBP26.81■■□□□ 1.88
HPS3-207ENST00000494327 MROH7-TTC4A0A0A0MT08 1334 aa26.81■■□□□ 1.88
HPS3-207ENST00000494327 CA12O43570 354 aa26.8■■□□□ 1.88
HPS3-207ENST00000494327 CYP2E1P05181 493 aaPredicted RBP26.8■■□□□ 1.88
HPS3-207ENST00000494327 ANKRD13AQ8IZ07 590 aa26.8■■□□□ 1.88
HPS3-207ENST00000494327 IFIT2P09913 472 aaKnown RBP26.79■■□□□ 1.88
HPS3-207ENST00000494327 PRDM10Q9NQV6 1147 aa26.79■■□□□ 1.88
HPS3-207ENST00000494327 FAM198AQ9UFP1 575 aa26.79■■□□□ 1.88
HPS3-207ENST00000494327 SPRYD7Q5W111 196 aa26.78■■□□□ 1.88
HPS3-207ENST00000494327 HOOK2Q96ED9 719 aa26.78■■□□□ 1.88
HPS3-207ENST00000494327 NDUFB9Q9Y6M9 179 aa26.78■■□□□ 1.88
HPS3-207ENST00000494327 GPR75-ASB3A0A0A6YYF3 556 aa26.77■■□□□ 1.88
HPS3-207ENST00000494327 UNCXA6NJT0 531 aa26.77■■□□□ 1.88
HPS3-207ENST00000494327 TRPA1O75762 1119 aa26.77■■□□□ 1.88
HPS3-207ENST00000494327 RGS3P49796 1198 aa26.77■■□□□ 1.88
HPS3-207ENST00000494327 MIGA2Q7L4E1 593 aa26.77■■□□□ 1.88
HPS3-207ENST00000494327 ZFPM1Q8IX07 1006 aa26.77■■□□□ 1.88
HPS3-207ENST00000494327 REM2Q8IYK8 340 aaPredicted RBP26.77■■□□□ 1.88
HPS3-207ENST00000494327 ELP3Q9H9T3 547 aa26.77■■□□□ 1.88
HPS3-207ENST00000494327 PIH1D3Q9NQM4 214 aaKnown RBP26.77■■□□□ 1.88
HPS3-207ENST00000494327 MAP3K9P80192 1104 aa26.76■■□□□ 1.87
HPS3-207ENST00000494327 PICALMQ13492 652 aa26.76■■□□□ 1.87
HPS3-207ENST00000494327 NAA16Q6N069 864 aaPredicted RBP26.76■■□□□ 1.87
HPS3-207ENST00000494327 RNF186Q9NXI6 227 aa26.76■■□□□ 1.87
HPS3-207ENST00000494327 MYH2Q9UKX2 1941 aa26.76■■□□□ 1.87
HPS3-207ENST00000494327 DCAF15Q66K64 600 aa26.75■■□□□ 1.87
HPS3-207ENST00000494327 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.75■■□□□ 1.87
HPS3-207ENST00000494327 WNK4Q96J92 1243 aa26.75■■□□□ 1.87
HPS3-207ENST00000494327 CRBNQ96SW2 442 aa26.75■■□□□ 1.87
HPS3-207ENST00000494327 IDI2Q9BXS1 227 aa26.75■■□□□ 1.87
HPS3-207ENST00000494327 RPAP1Q9BWH6 1393 aaPredicted RBP26.74■■□□□ 1.87
HPS3-207ENST00000494327 ZSCAN29Q8IWY8 852 aaPredicted RBP26.74■■□□□ 1.87
HPS3-207ENST00000494327 TNS4Q8IZW8 715 aa26.74■■□□□ 1.87
HPS3-207ENST00000494327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.74■■□□□ 1.87
HPS3-207ENST00000494327 NOL10Q9BSC4 688 aaKnown RBP26.74■■□□□ 1.87
HPS3-207ENST00000494327 CSADQ9Y600 493 aa26.74■■□□□ 1.87
HPS3-207ENST00000494327 ENTPD3O75355 529 aa26.73■■□□□ 1.87
HPS3-207ENST00000494327 WDHD1O75717 1129 aaPredicted RBP26.73■■□□□ 1.87
HPS3-207ENST00000494327 IDH1O75874 414 aaKnown RBP26.73■■□□□ 1.87
HPS3-207ENST00000494327 RHBDL3P58872 404 aa26.73■■□□□ 1.87
HPS3-207ENST00000494327 VGLL4Q14135 290 aa26.73■■□□□ 1.87
HPS3-207ENST00000494327 WRNIP1Q96S55 665 aa26.73■■□□□ 1.87
HPS3-207ENST00000494327 LRRCC1Q9C099 1032 aa26.73■■□□□ 1.87
HPS3-207ENST00000494327 ANTXR1Q9H6X2 564 aa26.73■■□□□ 1.87
HPS3-207ENST00000494327 DDX4Q9NQI0 724 aaKnown RBP26.73■■□□□ 1.87
HPS3-207ENST00000494327 SMARCA5O60264 1052 aaPredicted RBP26.72■■□□□ 1.87
HPS3-207ENST00000494327 ZBTB48P10074 688 aaPredicted RBP26.72■■□□□ 1.87
HPS3-207ENST00000494327 SREBF2Q12772 1141 aa26.72■■□□□ 1.87
HPS3-207ENST00000494327 OPTNQ96CV9 577 aa26.72■■□□□ 1.87
HPS3-207ENST00000494327 ZNF341Q9BYN7 854 aa26.72■■□□□ 1.87
HPS3-207ENST00000494327 SAGE1Q9NXZ1 904 aa26.72■■□□□ 1.87
HPS3-207ENST00000494327 GJA5P36382 358 aa26.71■■□□□ 1.87
HPS3-207ENST00000494327 TM4SF4P48230 202 aa26.71■■□□□ 1.87
HPS3-207ENST00000494327 ZKSCAN4Q969J2 545 aaPredicted RBP26.71■■□□□ 1.87
HPS3-207ENST00000494327 AATFQ9NY61 560 aaKnown RBP eCLIP26.71■■□□□ 1.87
HPS3-207ENST00000494327 PCDHB15Q9Y5E8 787 aa26.71■■□□□ 1.87
HPS3-207ENST00000494327 MANSC4A6NHS7 340 aaPredicted RBP26.7■■□□□ 1.86
HPS3-207ENST00000494327 BAG3O95817 575 aa26.7■■□□□ 1.86
HPS3-207ENST00000494327 CNKSR2Q8WXI2 1034 aa26.7■■□□□ 1.86
HPS3-207ENST00000494327 AKAP11Q9UKA4 1901 aa26.7■■□□□ 1.86
HPS3-207ENST00000494327 CYP7A1P22680 504 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms