RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ELP3Q9H9T3 547 aa10.59□□□□□ -0.71
LRCH3-219ENST00000494069 GNL3LQ9NVN8 582 aaKnown RBP10.59□□□□□ -0.71
LRCH3-219ENST00000494069 SUGT1Q9Y2Z0 365 aa10.59□□□□□ -0.71
LRCH3-219ENST00000494069 ZBED9Q6R2W3 1325 aa10.58□□□□□ -0.71
LRCH3-219ENST00000494069 IGF2BP3O00425 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
LRCH3-219ENST00000494069 LDHBP07195 334 aaKnown RBP10.58□□□□□ -0.72
LRCH3-219ENST00000494069 IREB2P48200 963 aaKnown RBP10.58□□□□□ -0.72
LRCH3-219ENST00000494069 TNNI2P48788 182 aa10.58□□□□□ -0.72
LRCH3-219ENST00000494069 NFIAQ12857 509 aa10.58□□□□□ -0.72
LRCH3-219ENST00000494069 CDC42EP5Q6NZY7 148 aa10.58□□□□□ -0.72
LRCH3-219ENST00000494069 HHIPL2Q6UWX4 724 aa10.58□□□□□ -0.72
LRCH3-219ENST00000494069 ZNF296Q8WUU4 475 aaPredicted RBP10.58□□□□□ -0.72
LRCH3-219ENST00000494069 NEUROD6Q96NK8 337 aa10.58□□□□□ -0.72
LRCH3-219ENST00000494069 DENND2AQ9ULE3 1009 aa10.58□□□□□ -0.72
LRCH3-219ENST00000494069 MAST3O60307 1309 aa10.58□□□□□ -0.72
LRCH3-219ENST00000494069 SEMA3EO15041 775 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 ZBTB7BO15156 539 aaPredicted RBP10.57□□□□□ -0.72
LRCH3-219ENST00000494069 MNX1P50219 401 aaPredicted RBP10.57□□□□□ -0.72
LRCH3-219ENST00000494069 MAP3K9P80192 1104 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 ATP8B2P98198 1209 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 SREBF2Q12772 1141 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 TCP10Q12799 353 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 VGLL4Q14135 290 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 PI16Q6UXB8 463 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 ITPRIPQ8IWB1 547 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 ZFPM1Q8IX07 1006 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 ANKRD13AQ8IZ07 590 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.57□□□□□ -0.72
LRCH3-219ENST00000494069 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 PTPN18Q99952 460 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 SALL1Q9NSC2 1324 aa10.57□□□□□ -0.72
LRCH3-219ENST00000494069 MANSC4A6NHS7 340 aaPredicted RBP10.56□□□□□ -0.72
LRCH3-219ENST00000494069 GPR25O00155 361 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 ZBTB48P10074 688 aaPredicted RBP10.56□□□□□ -0.72
LRCH3-219ENST00000494069 G3BP1Q13283 466 aaKnown RBP eCLIP10.56□□□□□ -0.72
LRCH3-219ENST00000494069 TBC1D9Q6ZT07 1266 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 MIGA2Q7L4E1 593 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 FAM83AQ86UY5 434 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 FTSJ3Q8IY81 847 aaKnown RBP10.56□□□□□ -0.72
LRCH3-219ENST00000494069 ZNF384Q8TF68 577 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 ZKSCAN4Q969J2 545 aaPredicted RBP10.56□□□□□ -0.72
LRCH3-219ENST00000494069 USP40Q9NVE5 1235 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 TMOD2Q9NZR1 351 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 HMG20BQ9P0W2 317 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 FAM198AQ9UFP1 575 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 ABCF2Q9UG63 623 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 AKAP2Q9Y2D5 859 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 MYH13Q9UKX3 1938 aa10.56□□□□□ -0.72
LRCH3-219ENST00000494069 UNCXA6NJT0 531 aa10.55□□□□□ -0.72
LRCH3-219ENST00000494069 SLURP2P0DP57 97 aa10.55□□□□□ -0.72
LRCH3-219ENST00000494069 MVPQ14764 893 aaKnown RBP10.55□□□□□ -0.72
LRCH3-219ENST00000494069 FKBP1CQ5VVH2 108 aa10.55□□□□□ -0.72
LRCH3-219ENST00000494069 SSH3Q8TE77 659 aa10.55□□□□□ -0.72
LRCH3-219ENST00000494069 FAM151AQ8WW52 585 aa10.55□□□□□ -0.72
LRCH3-219ENST00000494069 SNCAIPQ9Y6H5 919 aa10.55□□□□□ -0.72
LRCH3-219ENST00000494069 OTOFQ9HC10 1997 aa10.55□□□□□ -0.72
LRCH3-219ENST00000494069 TESPA1A2RU30 521 aaPredicted RBP10.54□□□□□ -0.72
LRCH3-219ENST00000494069 SURF6O75683 361 aaKnown RBP10.54□□□□□ -0.72
LRCH3-219ENST00000494069 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
LRCH3-219ENST00000494069 INPP5BP32019 993 aa10.54□□□□□ -0.72
LRCH3-219ENST00000494069 CTU1Q7Z7A3 348 aaKnown RBP10.54□□□□□ -0.72
LRCH3-219ENST00000494069 DZIP1Q86YF9 867 aaKnown RBP10.54□□□□□ -0.72
LRCH3-219ENST00000494069 SPATA5Q8NB90 893 aa10.54□□□□□ -0.72
LRCH3-219ENST00000494069 BRI3BPQ8WY22 251 aa10.54□□□□□ -0.72
LRCH3-219ENST00000494069 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
LRCH3-219ENST00000494069 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
LRCH3-219ENST00000494069 WRNIP1Q96S55 665 aa10.54□□□□□ -0.72
LRCH3-219ENST00000494069 DBNDD2Q9BQY9 259 aa10.54□□□□□ -0.72
LRCH3-219ENST00000494069 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
LRCH3-219ENST00000494069 GAKO14976 1311 aa10.54□□□□□ -0.72
LRCH3-219ENST00000494069 MCAMP43121 646 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 BTDP43251 543 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 RGS3P49796 1198 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 INHBEP58166 350 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 CAP1Q01518 475 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 MECOMQ03112 1051 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 TNNI3KQ59H18 835 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 GORABQ5T7V8 394 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 SH3BP5LQ7L8J4 393 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
LRCH3-219ENST00000494069 CFHR5Q9BXR6 569 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 DDX4Q9NQI0 724 aaKnown RBP10.53□□□□□ -0.72
LRCH3-219ENST00000494069 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 CSADQ9Y600 493 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 FPGT-TNNI3KV9GXZ4 949 aa10.53□□□□□ -0.72
LRCH3-219ENST00000494069 PDS5AQ29RF7 1337 aaKnown RBP10.53□□□□□ -0.72
LRCH3-219ENST00000494069 SPDYE5A6NIY4 337 aa10.52□□□□□ -0.73
LRCH3-219ENST00000494069 FKTNO75072 461 aa10.52□□□□□ -0.73
LRCH3-219ENST00000494069 WDHD1O75717 1129 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-219ENST00000494069 ALDH1A1P00352 501 aa10.52□□□□□ -0.73
LRCH3-219ENST00000494069 ARID4AP29374 1257 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-219ENST00000494069 CRHR2Q13324 411 aa10.52□□□□□ -0.73
LRCH3-219ENST00000494069 OS9Q13438 667 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-219ENST00000494069 CEP85Q6P2H3 762 aa10.52□□□□□ -0.73
LRCH3-219ENST00000494069 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.73
LRCH3-219ENST00000494069 FAM163AQ96GL9 167 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-219ENST00000494069 ZNF341Q9BYN7 854 aa10.52□□□□□ -0.73
LRCH3-219ENST00000494069 CCDC8Q9H0W5 538 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms