RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 AATFQ9NY61 560 aaKnown RBP eCLIP17.9■□□□□ 0.465e-22■□□□□ 9.1
ACTB-213ENST00000493945 TCRBV5S4A2TA0A5A2 114 aa17.89■□□□□ 0.45
ACTB-213ENST00000493945 CHMLP26374 656 aa17.89■□□□□ 0.45
ACTB-213ENST00000493945 EPHX2P34913 555 aa17.89■□□□□ 0.45
ACTB-213ENST00000493945 PPP4CP60510 307 aa17.89■□□□□ 0.45
ACTB-213ENST00000493945 NMIQ13287 307 aaPredicted RBP17.89■□□□□ 0.45
ACTB-213ENST00000493945 APOBEC3FQ8IUX4 373 aaKnown RBP17.89■□□□□ 0.45
ACTB-213ENST00000493945 CCDC171Q6TFL3 1326 aa17.89■□□□□ 0.45
ACTB-213ENST00000493945 REC8O95072 547 aa17.88■□□□□ 0.45
ACTB-213ENST00000493945 MBD4O95243 580 aa17.88■□□□□ 0.45
ACTB-213ENST00000493945 USP5P45974 858 aa17.88■□□□□ 0.45
ACTB-213ENST00000493945 GRIK5Q16478 980 aa17.88■□□□□ 0.45
ACTB-213ENST00000493945 RBM26Q5T8P6 1007 aaKnown RBP17.88■□□□□ 0.45
ACTB-213ENST00000493945 TEX11Q8IYF3 940 aa17.88■□□□□ 0.45
ACTB-213ENST00000493945 MIGA1Q8NAN2 632 aa17.88■□□□□ 0.45
ACTB-213ENST00000493945 ZC3H15Q8WU90 426 aaKnown RBP17.88■□□□□ 0.45
ACTB-213ENST00000493945 GPBP1L1Q9HC44 474 aaPredicted RBP17.88■□□□□ 0.45
ACTB-213ENST00000493945 GPAA1O43292 621 aa17.87■□□□□ 0.45
ACTB-213ENST00000493945 EPS15P42566 896 aa17.87■□□□□ 0.45
ACTB-213ENST00000493945 TBC1D10BQ4KMP7 808 aaPredicted RBP17.87■□□□□ 0.45
ACTB-213ENST00000493945 USP40Q9NVE5 1235 aa17.87■□□□□ 0.45
ACTB-213ENST00000493945 PITPNM2Q9BZ72 1349 aa17.87■□□□□ 0.45
ACTB-213ENST00000493945 ADAMTSL1Q8N6G6 1762 aa17.86■□□□□ 0.45
ACTB-213ENST00000493945 FOCADQ5VW36 1801 aa17.86■□□□□ 0.45
ACTB-213ENST00000493945 NAV1Q8NEY1 1877 aa17.86■□□□□ 0.45
ACTB-213ENST00000493945 WNT10BO00744 389 aa17.86■□□□□ 0.45
ACTB-213ENST00000493945 FKBP1CQ5VVH2 108 aa17.86■□□□□ 0.45
ACTB-213ENST00000493945 SAMD7Q7Z3H4 446 aa17.86■□□□□ 0.45
ACTB-213ENST00000493945 DCPSQ96C86 337 aaKnown RBP17.86■□□□□ 0.45
ACTB-213ENST00000493945 TAF1DQ9H5J8 278 aaPredicted RBP17.86■□□□□ 0.45
ACTB-213ENST00000493945 VEZTQ9HBM0 779 aa17.86■□□□□ 0.45
ACTB-213ENST00000493945 ATP8A2Q9NTI2 1148 aa17.86■□□□□ 0.45
ACTB-213ENST00000493945 A0A0D9SFI3 127 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
ACTB-213ENST00000493945 APPP05067 770 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 SPDYE2Q495Y8 402 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 EAPPQ56P03 285 aaPredicted RBP17.85■□□□□ 0.45
ACTB-213ENST00000493945 APOBEC3HQ6NTF7 200 aaKnown RBP17.85■□□□□ 0.45
ACTB-213ENST00000493945 GIMAP6Q6P9H5 292 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 OSBP2Q969R2 916 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 HOOK2Q96ED9 719 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 FAM227BQ96M60 508 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 ESYT1Q9BSJ8 1104 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 PUS7LQ9H0K6 701 aaKnown RBP17.85■□□□□ 0.45
ACTB-213ENST00000493945 UPF2Q9HAU5 1272 aaKnown RBP17.85■□□□□ 0.45
ACTB-213ENST00000493945 PPP2R3BQ9Y5P8 575 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 SLC4A4Q9Y6R1 1079 aa17.85■□□□□ 0.45
ACTB-213ENST00000493945 SGSM2O43147 1006 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 YY1P25490 414 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 CDC42EP5Q6NZY7 148 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 ADGRA1Q86SQ6 560 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 SULF1Q8IWU6 871 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 ZNF526Q8TF50 670 aaPredicted RBP17.84■□□□□ 0.45
ACTB-213ENST00000493945 ZNF384Q8TF68 577 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 ZBED3Q96IU2 234 aaPredicted RBP17.84■□□□□ 0.45
ACTB-213ENST00000493945 RIOK1Q9BRS2 568 aaKnown RBP17.84■□□□□ 0.45
ACTB-213ENST00000493945 ARMT1Q9H993 441 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 CTNNA3Q9UI47 895 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 UTRNP46939 3433 aa17.84■□□□□ 0.45
ACTB-213ENST00000493945 M0R2C6 588 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.44
ACTB-213ENST00000493945 ENTPD3O75355 529 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 HLA-DOAP06340 250 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 TDO2P48775 406 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 FAM83AQ86UY5 434 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 LCORLQ8N3X6 602 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 TRPM4Q8TD43 1214 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 PRMT6Q96LA8 375 aaPredicted RBP17.83■□□□□ 0.44
ACTB-213ENST00000493945 STRBPQ96SI9 672 aaKnown RBP17.83■□□□□ 0.44
ACTB-213ENST00000493945 IDI2Q9BXS1 227 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 NAPBQ9H115 298 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 TDRD3Q9H7E2 651 aaKnown RBP17.83■□□□□ 0.44
ACTB-213ENST00000493945 RRAGCQ9HB90 399 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 GGA3Q9NZ52 723 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 ZNF70Q9UC06 446 aaPredicted RBP17.83■□□□□ 0.44
ACTB-213ENST00000493945 CLEC11AQ9Y240 323 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 CDK5RAP2Q96SN8 1893 aa17.83■□□□□ 0.44
ACTB-213ENST00000493945 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
ACTB-213ENST00000493945 ZMYM6O95789 1325 aa17.82■□□□□ 0.44
ACTB-213ENST00000493945 MCCP23508 829 aa17.82■□□□□ 0.44
ACTB-213ENST00000493945 LDHDQ86WU2 507 aa17.82■□□□□ 0.44
ACTB-213ENST00000493945 SH3RF3Q8TEJ3 882 aaPredicted RBP17.82■□□□□ 0.44
ACTB-213ENST00000493945 DSCC1Q9BVC3 393 aa17.82■□□□□ 0.44
ACTB-213ENST00000493945 DHX36Q9H2U1 1008 aaKnown RBP17.82■□□□□ 0.44
ACTB-213ENST00000493945 ANO2Q9NQ90 1003 aa17.82■□□□□ 0.44
ACTB-213ENST00000493945 ARPP21Q9UBL0 812 aaPredicted RBP17.82■□□□□ 0.44
ACTB-213ENST00000493945 TAOK2Q9UL54 1235 aa17.82■□□□□ 0.44
ACTB-213ENST00000493945 MYH1P12882 1939 aa17.82■□□□□ 0.44
ACTB-213ENST00000493945 CLRN2A0PK11 232 aa17.81■□□□□ 0.44
ACTB-213ENST00000493945 PATL2C9JE40 543 aaKnown RBP17.81■□□□□ 0.44
ACTB-213ENST00000493945 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
ACTB-213ENST00000493945 RHBDL3P58872 404 aa17.81■□□□□ 0.44
ACTB-213ENST00000493945 DYNLL1P63167 89 aaKnown RBP17.81■□□□□ 0.44
ACTB-213ENST00000493945 NBPF9Q3BBW0 867 aa17.81■□□□□ 0.44
ACTB-213ENST00000493945 ANGEL2Q5VTE6 544 aaKnown RBP17.81■□□□□ 0.44
ACTB-213ENST00000493945 TRIM34Q9BYJ4 488 aa17.81■□□□□ 0.44
ACTB-213ENST00000493945 FLT1P17948 1338 aa17.8■□□□□ 0.44
ACTB-213ENST00000493945 SHTN1A0MZ66 631 aa17.8■□□□□ 0.44
ACTB-213ENST00000493945 NF2P35240 595 aa17.8■□□□□ 0.44
ACTB-213ENST00000493945 PICALMQ13492 652 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms