RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 RBSNQ9H1K0 784 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 KRT15P19012 456 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 CYP26C1Q6V0L0 522 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 P3H4Q92791 437 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 ARHGAP42A6NI28 874 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 CYP7A1P22680 504 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 U2AF2P26368 475 aaKnown RBP eCLIP8.77□□□□□ -1.011e-6■■■□□ 19.1
BRCA1-221ENST00000493795 TNNI2P48788 182 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 NOC4LQ9BVI4 516 aaKnown RBP8.77□□□□□ -1.01
BRCA1-221ENST00000493795 TRIM4Q9C037 500 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 ZC4H2Q9NQZ6 224 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 ZBTB21Q9ULJ3 1066 aa8.77□□□□□ -1.01
BRCA1-221ENST00000493795 GOLGA6BA6NDN3 693 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 CALUO43852 315 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-221ENST00000493795 LUC7L3O95232 432 aaKnown RBP8.76□□□□□ -1.01
BRCA1-221ENST00000493795 RFX1P22670 979 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 FAM71BQ8TC56 605 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 BAIAP2L1Q9UHR4 511 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 PALM3A6NDB9 673 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-221ENST00000493795 GPTP24298 496 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 PAK2Q13177 524 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 CASC4Q6P4E1 433 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 DTHD1Q6ZMT9 781 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 SV2BQ7L1I2 683 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 MICAL1Q8TDZ2 1067 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 HFM1A2PYH4 1435 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 PLEKHH2Q8IVE3 1493 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 BACH1O14867 736 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 GNA11P29992 359 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 HSP90AA5PQ58FG0 334 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 LCA5Q86VQ0 697 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 MAIP1Q8WWC4 291 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 ZNF622Q969S3 477 aaKnown RBP eCLIP8.76□□□□□ -1.015e-8■■■□□ 17.3
BRCA1-221ENST00000493795 LARSQ9P2J5 1176 aaKnown RBP8.76□□□□□ -1.01
BRCA1-221ENST00000493795 MAP3K2Q9Y2U5 619 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 NKTRP30414 1462 aaKnown RBP8.76□□□□□ -1.01
BRCA1-221ENST00000493795 F6X3S4 739 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 PFDN1O60925 122 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 MX2P20592 715 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 RARSP54136 660 aaKnown RBP8.76□□□□□ -1.01
BRCA1-221ENST00000493795 CCDC152Q4G0S7 254 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 SSH1Q8WYL5 1049 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 MRPL46Q9H2W6 279 aaKnown RBP8.76□□□□□ -1.01
BRCA1-221ENST00000493795 PPP1R9AQ9ULJ8 1098 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 TPX2Q9ULW0 747 aaKnown RBP8.76□□□□□ -1.01
BRCA1-221ENST00000493795 EXOC7Q9UPT5 735 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 STK38LQ9Y2H1 464 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 FGD6Q6ZV73 1430 aa8.76□□□□□ -1.01
BRCA1-221ENST00000493795 ZBTB24O43167 697 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-221ENST00000493795 SMTNP53814 917 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 MAP3K7CLP57077 242 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 PLCB4Q15147 1175 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 JADE1Q6IE81 842 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 Q6ZUG5 572 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 IQUBQ8NA54 791 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 PARP2Q9UGN5 583 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 TRIM68Q6AZZ1 485 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 MPRIPQ6WCQ1 1025 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 SECISBP2LQ93073 1101 aaKnown RBP8.75□□□□□ -1.01
BRCA1-221ENST00000493795 CTNND2Q9UQB3 1225 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 HIP1RO75146 1068 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 SYCE1Q8N0S2 351 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 TSKSQ9UJT2 592 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 IGSF3O75054 1194 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 TACO1Q9BSH4 297 aaKnown RBP8.75□□□□□ -1.01
BRCA1-221ENST00000493795 NACA2Q9H009 215 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 VPS37BQ9H9H4 285 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 TRAF5O00463 557 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 KIF11P52732 1056 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 GABPB1Q06547 395 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-221ENST00000493795 DENND2CQ68D51 928 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 NXNQ6DKJ4 435 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 BRAPQ7Z569 592 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 SPDL1Q96EA4 605 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 TRIM31Q9BZY9 425 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 ZBTB3Q9H5J0 574 aa8.75□□□□□ -1.01
BRCA1-221ENST00000493795 BAG2O95816 211 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 SYF2O95926 243 aaKnown RBP8.74□□□□□ -1.01
BRCA1-221ENST00000493795 MYL5Q02045 173 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 PICALMQ13492 652 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 NSD3Q9BZ95 1437 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 STX2P32856 288 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 STRN3Q13033 797 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 LRCH2Q5VUJ6 765 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 TRIM56Q9BRZ2 755 aaKnown RBP8.74□□□□□ -1.01
BRCA1-221ENST00000493795 KLHL14Q9P2G3 628 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 TBC1D8O95759 1140 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 TTC4O95801 387 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 HARSP12081 509 aaKnown RBP8.74□□□□□ -1.01
BRCA1-221ENST00000493795 SLC8A1P32418 973 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 DNM1Q05193 864 aaKnown RBP8.74□□□□□ -1.01
BRCA1-221ENST00000493795 MCMDC2Q4G0Z9 681 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 STAG1Q8WVM7 1258 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 LRGUKQ96M69 825 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 APOEP02649 317 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 GNAT2P19087 354 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 ANKRD20A4Q4UJ75 823 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 ANKRD20A8PQ5CZ79 823 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 ANKRD20A2Q5SQ80 823 aa8.74□□□□□ -1.01
BRCA1-221ENST00000493795 ANKRD20A1Q5TYW2 823 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms