RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 FAM83AQ86UY5 434 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 AACSQ86V21 672 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 EAF2Q96CJ1 260 aaPredicted RBP8.55□□□□□ -1.04
TOP3A-207ENST00000493648 HOOK2Q96ED9 719 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 KIF1BPQ96EK5 621 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 FAM163AQ96GL9 167 aaPredicted RBP8.55□□□□□ -1.04
TOP3A-207ENST00000493648 USP40Q9NVE5 1235 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 WBP1LQ9NX94 342 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 RAI14Q9P0K7 980 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 LRP2BPQ9P2M1 347 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 ANGEL1Q9UNK9 670 aaKnown RBP8.55□□□□□ -1.04
TOP3A-207ENST00000493648 DAGLAQ9Y4D2 1042 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 AOX1Q06278 1338 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 PAPPA2Q9BXP8 1791 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 UNCXA6NJT0 531 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 IGSF3O75054 1194 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 IFIT2P09913 472 aaKnown RBP8.54□□□□□ -1.04
TOP3A-207ENST00000493648 MCAMP43121 646 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 IREB2P48200 963 aaKnown RBP8.54□□□□□ -1.04
TOP3A-207ENST00000493648 CACNB3P54284 484 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 MECOMQ03112 1051 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 NBPF12Q5TAG4 269 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-207ENST00000493648 CDC42EP5Q6NZY7 148 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 TBC1D9Q6ZT07 1266 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 REM2Q8IYK8 340 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-207ENST00000493648 SLC10A4Q96EP9 437 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 IL1RAPL2Q9NP60 686 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 SNRKQ9NRH2 765 aa8.54□□□□□ -1.04
TOP3A-207ENST00000493648 DBNLQ9UJU6 430 aaKnown RBP8.54□□□□□ -1.04
TOP3A-207ENST00000493648 MYH2Q9UKX2 1941 aa8.53□□□□□ -1.04
TOP3A-207ENST00000493648 FAM155AB1AL88 458 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-207ENST00000493648 USP2O75604 605 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-207ENST00000493648 SLC10A3P09131 477 aa8.53□□□□□ -1.04
TOP3A-207ENST00000493648 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-207ENST00000493648 KIF23Q02241 960 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-207ENST00000493648 MAP3K11Q16584 847 aa8.53□□□□□ -1.04
TOP3A-207ENST00000493648 LDLRAD1Q5T700 205 aa8.53□□□□□ -1.04
TOP3A-207ENST00000493648 PI16Q6UXB8 463 aa8.53□□□□□ -1.04
TOP3A-207ENST00000493648 FAM151AQ8WW52 585 aa8.53□□□□□ -1.04
TOP3A-207ENST00000493648 NOL10Q9BSC4 688 aaKnown RBP8.53□□□□□ -1.04
TOP3A-207ENST00000493648 TMEM39BQ9GZU3 492 aa8.53□□□□□ -1.04
TOP3A-207ENST00000493648 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
TOP3A-207ENST00000493648 GPR75-ASB3A0A0A6YYF3 556 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 FOXN1O15353 648 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 CA12O43570 354 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 MAP4K4O95819 1239 aaPredicted RBP8.52□□□□□ -1.05
TOP3A-207ENST00000493648 CYP2E1P05181 493 aaPredicted RBP8.52□□□□□ -1.05
TOP3A-207ENST00000493648 BTDP43251 543 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 ZAP70P43403 619 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 NAA16Q6N069 864 aaPredicted RBP8.52□□□□□ -1.05
TOP3A-207ENST00000493648 RASAL3Q86YV0 1011 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 ANKRD13AQ8IZ07 590 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 NSUN4Q96CB9 384 aaKnown RBP8.52□□□□□ -1.05
TOP3A-207ENST00000493648 TEPSINQ96N21 525 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 LRRCC1Q9C099 1032 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 DCTPP1Q9H773 170 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 TLR7Q9NYK1 1049 aaKnown RBP8.52□□□□□ -1.05
TOP3A-207ENST00000493648 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.52□□□□□ -1.05
TOP3A-207ENST00000493648 FZD1Q9UP38 647 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 AK9Q5TCS8 1911 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 MROH7-TTC4A0A0A0MT08 1334 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 GAKO14976 1311 aa8.52□□□□□ -1.05
TOP3A-207ENST00000493648 ENTPD3O75355 529 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 BAG3O95817 575 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 MAP3K9P80192 1104 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 TCP10Q12799 353 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 AAMPQ13685 434 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 TTF1Q15361 905 aaPredicted RBP8.51□□□□□ -1.05
TOP3A-207ENST00000493648 DCAF15Q66K64 600 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 SP7Q8TDD2 431 aaPredicted RBP8.51□□□□□ -1.05
TOP3A-207ENST00000493648 CSRNP1Q96S65 589 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 CRBNQ96SW2 442 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 ZIC5Q96T25 663 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 IDI2Q9BXS1 227 aa8.51□□□□□ -1.05
TOP3A-207ENST00000493648 AKAP11Q9UKA4 1901 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 PLCG2P16885 1265 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 RGS3P49796 1198 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 LBX1P52954 281 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 INHBEP58166 350 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 SREBF2Q12772 1141 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 MAP3K12Q12852 859 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 NFIAQ12857 509 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 SPRYD7Q5W111 196 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 TMED8Q6PL24 325 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-207ENST00000493648 ZSCAN29Q8IWY8 852 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-207ENST00000493648 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.5□□□□□ -1.05
TOP3A-207ENST00000493648 ZNF341Q9BYN7 854 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 PRDM10Q9NQV6 1147 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 FAM198AQ9UFP1 575 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 CSADQ9Y600 493 aa8.5□□□□□ -1.05
TOP3A-207ENST00000493648 RPAP1Q9BWH6 1393 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-207ENST00000493648 SSC5DA1L4H1 1573 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 MANSC4A6NHS7 340 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-207ENST00000493648 IDH1O75874 414 aaKnown RBP8.49□□□□□ -1.05
TOP3A-207ENST00000493648 ZBTB48P10074 688 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-207ENST00000493648 HSPA8P11142 646 aaKnown RBP8.49□□□□□ -1.05
TOP3A-207ENST00000493648 CYP7A1P22680 504 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 TM4SF4P48230 202 aa8.49□□□□□ -1.05
TOP3A-207ENST00000493648 PPP4CP60510 307 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms