RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 MAST3O60307 1309 aa18.04■□□□□ 0.48
PRPF40A-211ENST00000493468 MYH13Q9UKX3 1938 aa18.04■□□□□ 0.48
PRPF40A-211ENST00000493468 CACNB3P54284 484 aa18.04■□□□□ 0.48
PRPF40A-211ENST00000493468 GRIK5Q16478 980 aa18.04■□□□□ 0.48
PRPF40A-211ENST00000493468 FBXO33Q7Z6M2 555 aa18.04■□□□□ 0.48
PRPF40A-211ENST00000493468 ZNF341Q9BYN7 854 aa18.04■□□□□ 0.48
PRPF40A-211ENST00000493468 RNF208Q9H0X6 261 aa18.04■□□□□ 0.48
PRPF40A-211ENST00000493468 SUGT1Q9Y2Z0 365 aa18.04■□□□□ 0.48
PRPF40A-211ENST00000493468 MROH5Q6ZUA9 1318 aa18.03■□□□□ 0.48
PRPF40A-211ENST00000493468 A0A0C4DFX4 3053 aa18.03■□□□□ 0.48
PRPF40A-211ENST00000493468 PDHXO00330 501 aa18.03■□□□□ 0.48
PRPF40A-211ENST00000493468 FARP2O94887 1054 aaPredicted RBP18.03■□□□□ 0.48
PRPF40A-211ENST00000493468 FMNL1O95466 1100 aaPredicted RBP18.03■□□□□ 0.48
PRPF40A-211ENST00000493468 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
PRPF40A-211ENST00000493468 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
PRPF40A-211ENST00000493468 SLAIN1Q8ND83 568 aa18.03■□□□□ 0.48
PRPF40A-211ENST00000493468 ALPK3Q96L96 1907 aa18.02■□□□□ 0.48
PRPF40A-211ENST00000493468 APOBEC3HQ6NTF7 200 aaKnown RBP18.02■□□□□ 0.48
PRPF40A-211ENST00000493468 VPS37DQ86XT2 251 aa18.02■□□□□ 0.48
PRPF40A-211ENST00000493468 U2AF1L4Q8WU68 220 aaKnown RBP18.02■□□□□ 0.48
PRPF40A-211ENST00000493468 ZNF112Q9UJU3 913 aa18.02■□□□□ 0.48
PRPF40A-211ENST00000493468 AK9Q5TCS8 1911 aa18.02■□□□□ 0.47
PRPF40A-211ENST00000493468 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 F6X3S4 739 aa18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 VAMP4O75379 141 aa18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 BCRP11274 1271 aa18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 FCGRTP55899 365 aa18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 MOGSQ13724 837 aa18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 NOL9Q5SY16 702 aaKnown RBP18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 HHIPL2Q6UWX4 724 aa18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 PARK7Q99497 189 aaKnown RBP18.01■□□□□ 0.47
PRPF40A-211ENST00000493468 SGPL1O95470 568 aa18■□□□□ 0.47
PRPF40A-211ENST00000493468 INPP5BP32019 993 aa18■□□□□ 0.47
PRPF40A-211ENST00000493468 PRKCZQ05513 592 aa18■□□□□ 0.47
PRPF40A-211ENST00000493468 CHAF1AQ13111 956 aaPredicted RBP18■□□□□ 0.47
PRPF40A-211ENST00000493468 CAVIN4Q5BKX8 364 aa18■□□□□ 0.47
PRPF40A-211ENST00000493468 PUS3Q9BZE2 481 aaKnown RBP18■□□□□ 0.47
PRPF40A-211ENST00000493468 BIN2Q9UBW5 565 aaPredicted RBP18■□□□□ 0.47
PRPF40A-211ENST00000493468 PTPRFP10586 1907 aa18■□□□□ 0.47
PRPF40A-211ENST00000493468 KIF16BQ96L93 1317 aa17.99■□□□□ 0.47
PRPF40A-211ENST00000493468 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
PRPF40A-211ENST00000493468 FAM151AQ8WW52 585 aa17.99■□□□□ 0.47
PRPF40A-211ENST00000493468 C9orf78Q9NZ63 289 aaPredicted RBP17.99■□□□□ 0.47
PRPF40A-211ENST00000493468 IQSEC3Q9UPP2 1182 aaPredicted RBP17.99■□□□□ 0.47
PRPF40A-211ENST00000493468 DOCK2Q92608 1830 aa17.99■□□□□ 0.47
PRPF40A-211ENST00000493468 FRAT2O75474 233 aaPredicted RBP17.98■□□□□ 0.47
PRPF40A-211ENST00000493468 ECM2O94769 699 aaPredicted RBP17.98■□□□□ 0.47
PRPF40A-211ENST00000493468 UNC93B1Q9H1C4 597 aa17.98■□□□□ 0.47
PRPF40A-211ENST00000493468 SOX1O00570 391 aaPredicted RBP17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 CXCL11O14625 94 aa17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 EVI5O60447 810 aa17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 GPR153Q6NV75 609 aa17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 MIGA2Q7L4E1 593 aa17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 VGLL2Q8N8G2 317 aa17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 PXYLP1Q8TE99 480 aa17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 KAZALD1Q96I82 304 aa17.97■□□□□ 0.47
PRPF40A-211ENST00000493468 IRF5Q13568 498 aa17.96■□□□□ 0.47
PRPF40A-211ENST00000493468 GPAT2Q6NUI2 795 aa17.96■□□□□ 0.47
PRPF40A-211ENST00000493468 SUCLG2Q96I99 432 aa17.96■□□□□ 0.47
PRPF40A-211ENST00000493468 UTYO14607 1347 aa17.96■□□□□ 0.46
PRPF40A-211ENST00000493468 ADCY3O60266 1144 aa17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 PDE8BO95263 885 aa17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 METTL24Q5JXM2 366 aa17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 SRCIN1Q9C0H9 1055 aa17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 PAK6Q9NQU5 681 aaPredicted RBP17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 GABRQQ9UN88 632 aa17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 SLC45A1Q9Y2W3 748 aa17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 PHIPQ8WWQ0 1821 aa17.95■□□□□ 0.46
PRPF40A-211ENST00000493468 DOCK3Q8IZD9 2030 aa17.94■□□□□ 0.46
PRPF40A-211ENST00000493468 INHAP05111 366 aa17.94■□□□□ 0.46
PRPF40A-211ENST00000493468 CYP2C8P10632 490 aa17.94■□□□□ 0.46
PRPF40A-211ENST00000493468 LRCH3Q96II8 777 aa17.94■□□□□ 0.46
PRPF40A-211ENST00000493468 CRISPLD2Q9H0B8 497 aa17.94■□□□□ 0.46
PRPF40A-211ENST00000493468 DOCK1Q14185 1865 aa17.94■□□□□ 0.46
PRPF40A-211ENST00000493468 A0A0G2JLL6 359 aaPredicted RBP17.93■□□□□ 0.46
PRPF40A-211ENST00000493468 BMP8BP34820 402 aa17.93■□□□□ 0.46
PRPF40A-211ENST00000493468 FLT3LGP49771 235 aa17.93■□□□□ 0.46
PRPF40A-211ENST00000493468 BCAMP50895 628 aa17.93■□□□□ 0.46
PRPF40A-211ENST00000493468 EXOSC9Q06265 439 aaKnown RBP17.93■□□□□ 0.46
PRPF40A-211ENST00000493468 LRRC24Q50LG9 513 aa17.93■□□□□ 0.46
PRPF40A-211ENST00000493468 FASTKD5Q7L8L6 764 aaKnown RBP17.93■□□□□ 0.46
PRPF40A-211ENST00000493468 PRRT2Q7Z6L0 340 aaPredicted RBP17.93■□□□□ 0.46
PRPF40A-211ENST00000493468 ATRNL1Q5VV63 1379 aa17.92■□□□□ 0.46
PRPF40A-211ENST00000493468 WDR63Q8IWG1 891 aa17.92■□□□□ 0.46
PRPF40A-211ENST00000493468 WDR66Q8TBY9 1149 aa17.92■□□□□ 0.46
PRPF40A-211ENST00000493468 GDF15Q99988 308 aa17.92■□□□□ 0.46
PRPF40A-211ENST00000493468 STAP2Q9UGK3 403 aa17.92■□□□□ 0.46
PRPF40A-211ENST00000493468 DAGLAQ9Y4D2 1042 aa17.92■□□□□ 0.46
PRPF40A-211ENST00000493468 TFRCP02786 760 aaKnown RBP17.91■□□□□ 0.46
PRPF40A-211ENST00000493468 NBPF7P0C2Y1 421 aaPredicted RBP17.91■□□□□ 0.46
PRPF40A-211ENST00000493468 ELNP15502 786 aa17.91■□□□□ 0.46
PRPF40A-211ENST00000493468 FGFR2P21802 821 aa17.91■□□□□ 0.46
PRPF40A-211ENST00000493468 PUM3Q15397 648 aaKnown RBP17.91■□□□□ 0.46
PRPF40A-211ENST00000493468 CDC42EP5Q6NZY7 148 aa17.91■□□□□ 0.46
PRPF40A-211ENST00000493468 DEFB118Q96PH6 123 aa17.91■□□□□ 0.46
PRPF40A-211ENST00000493468 BICC1Q9H694 974 aaKnown RBP17.91■□□□□ 0.46
PRPF40A-211ENST00000493468 TNPO2O14787 897 aaKnown RBP17.9■□□□□ 0.46
PRPF40A-211ENST00000493468 IFIT1P09914 478 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms