RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 IQSEC3Q9UPP2 1182 aaPredicted RBP13.8□□□□□ -0.2
SNRNP200-207ENST00000493271 KCNH4Q9UQ05 1017 aa13.8□□□□□ -0.2
SNRNP200-207ENST00000493271 PTPRCP08575 1304 aa13.8□□□□□ -0.2
SNRNP200-207ENST00000493271 CACNB3P54284 484 aa13.79□□□□□ -0.2
SNRNP200-207ENST00000493271 LRRC24Q50LG9 513 aa13.79□□□□□ -0.2
SNRNP200-207ENST00000493271 NOL9Q5SY16 702 aaKnown RBP13.79□□□□□ -0.2
SNRNP200-207ENST00000493271 HTATIP2Q9BUP3 242 aa13.79□□□□□ -0.2
SNRNP200-207ENST00000493271 ZNF112Q9UJU3 913 aa13.79□□□□□ -0.2
SNRNP200-207ENST00000493271 SALL2Q9Y467 1007 aaPredicted RBP13.79□□□□□ -0.2
SNRNP200-207ENST00000493271 PDHXO00330 501 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 FGFR2P21802 821 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 GRK4P32298 578 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 ZEB1P37275 1124 aaPredicted RBP13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 PSMC4P43686 418 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 BCAMP50895 628 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 ANKRD44Q8N8A2 993 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 RAET1EQ8TD07 263 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 LPIN2Q92539 896 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 TRIM47Q96LD4 638 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 PARK7Q99497 189 aaKnown RBP13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
SNRNP200-207ENST00000493271 H0YGN5 161 aa13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 ANP32CO43423 234 aa13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 GJB1P08034 283 aa13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 SLC5A1P13866 664 aa13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 GJA8P48165 433 aa13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 UBXN2AP68543 259 aa13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 ADGRA2Q96PE1 1338 aa13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 SPINK5Q9NQ38 1064 aaPredicted RBP13.77□□□□□ -0.21
SNRNP200-207ENST00000493271 MYPNQ86TC9 1320 aa13.76□□□□□ -0.21
SNRNP200-207ENST00000493271 CXCL11O14625 94 aa13.76□□□□□ -0.21
SNRNP200-207ENST00000493271 ZBTB22O15209 634 aa13.76□□□□□ -0.21
SNRNP200-207ENST00000493271 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
SNRNP200-207ENST00000493271 OSBPP22059 807 aa13.76□□□□□ -0.21
SNRNP200-207ENST00000493271 FCGRTP55899 365 aa13.76□□□□□ -0.21
SNRNP200-207ENST00000493271 MIGA2Q7L4E1 593 aa13.76□□□□□ -0.21
SNRNP200-207ENST00000493271 CPA4Q9UI42 421 aa13.76□□□□□ -0.21
SNRNP200-207ENST00000493271 EYA2O00167 538 aa13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 SEMA3EO15041 775 aa13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 INPP5BP32019 993 aa13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 FASTKD5Q7L8L6 764 aaKnown RBP13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 SLAIN1Q8ND83 568 aa13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 DPF3Q92784 378 aa13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 GNL3LQ9NVN8 582 aaKnown RBP13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 DAGLAQ9Y4D2 1042 aa13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 NR2E3Q9Y5X4 410 aa13.75□□□□□ -0.21
SNRNP200-207ENST00000493271 SALL1Q9NSC2 1324 aa13.74□□□□□ -0.21
SNRNP200-207ENST00000493271 BCRP11274 1271 aa13.74□□□□□ -0.21
SNRNP200-207ENST00000493271 MTFR1Q15390 333 aa13.74□□□□□ -0.21
SNRNP200-207ENST00000493271 CDC42EP5Q6NZY7 148 aa13.74□□□□□ -0.21
SNRNP200-207ENST00000493271 UBE2Q1Q7Z7E8 422 aa13.74□□□□□ -0.21
SNRNP200-207ENST00000493271 ZGPATQ8N5A5 531 aaKnown RBP13.74□□□□□ -0.21
SNRNP200-207ENST00000493271 SLC45A1Q9Y2W3 748 aa13.74□□□□□ -0.21
SNRNP200-207ENST00000493271 A0A1W2PPC1 479 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 ENTPD3O75355 529 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 LDHBP07195 334 aaKnown RBP13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 CCL5P13501 91 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 MOGSQ13724 837 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 RNF208Q9H0X6 261 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 ZSWIM8A7E2V4 1837 aa13.73□□□□□ -0.21
SNRNP200-207ENST00000493271 MYH13Q9UKX3 1938 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 CIAO1O76071 339 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 CTGFP29279 349 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 TCP10Q12799 353 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 SLF2Q8IX21 1173 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 SCYL3Q8IZE3 742 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 KLHDC4Q8TBB5 520 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 IDI2Q9BXS1 227 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 PICK1Q9NRD5 415 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 BIN2Q9UBW5 565 aaPredicted RBP13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 CEP290O15078 2479 aa13.72□□□□□ -0.21
SNRNP200-207ENST00000493271 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.21
SNRNP200-207ENST00000493271 PRDX5P30044 214 aa13.71□□□□□ -0.21
SNRNP200-207ENST00000493271 RFX5P48382 616 aaPredicted RBP13.71□□□□□ -0.21
SNRNP200-207ENST00000493271 PRKCZQ05513 592 aa13.71□□□□□ -0.21
SNRNP200-207ENST00000493271 NFIAQ12857 509 aa13.71□□□□□ -0.21
SNRNP200-207ENST00000493271 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.21
SNRNP200-207ENST00000493271 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.21
SNRNP200-207ENST00000493271 FAM198AQ9UFP1 575 aa13.71□□□□□ -0.21
SNRNP200-207ENST00000493271 ZNF521Q96K83 1311 aa13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 FARP2O94887 1054 aaPredicted RBP13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 SGPL1O95470 568 aa13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 MAP3K10Q02779 954 aa13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 IRF5Q13568 498 aa13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 DIXDC1Q155Q3 683 aa13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 ATP2B3Q16720 1220 aa13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 U2AF1L4Q8WU68 220 aaKnown RBP13.7□□□□□ -0.22
SNRNP200-207ENST00000493271 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms