RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	SENP6	Q9GZR1	1112 aa	Predicted RBP	7.06	□□□□□ -1.28
SEC13-219	ENST00000492602	TSPYL2	Q9H2G4	693 aa	Predicted RBP	7.06	□□□□□ -1.28
SEC13-219	ENST00000492602	MGAM	O43451	1857 aa		7.06	□□□□□ -1.28
SEC13-219	ENST00000492602	HSP90B1	P14625	803 aa	Known RBP	7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	IGFBP4	P22692	258 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	TFF2	Q03403	129 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	MOGS	Q13724	837 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	GPAT2	Q6NUI2	795 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	SMCR8	Q8TEV9	937 aa	Predicted RBP	7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	BAD	Q92934	168 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	RNPC3	Q96LT9	517 aa	Known RBP	7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	PRDM12	Q9H4Q4	367 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	CD209	Q9NNX6	404 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	JAG2	Q9Y219	1238 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	LEMD3	Q9Y2U8	911 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	ECM29	Q5VYK3	1845 aa		7.05	□□□□□ -1.28
SEC13-219	ENST00000492602	COL3A1	P02461	1466 aa	Predicted RBP	7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	XIRP2	A4UGR9	3374 aa		7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	PRKAR2A	P13861	404 aa	Known RBP	7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	INPP5B	P32019	993 aa		7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	KCNQ1	P51787	676 aa		7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	AAK1	Q2M2I8	961 aa		7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	CC2D1B	Q5T0F9	858 aa	Known RBP	7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	ANKRD13C	Q8N6S4	541 aa		7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	PLBD2	Q8NHP8	589 aa		7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	KHSRP	Q92945	711 aa	Known RBP eCLIP	7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	TIFA	Q96CG3	184 aa		7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	UIMC1	Q96RL1	719 aa		7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	CDC5L	Q99459	802 aa	Known RBP	7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	BSDC1	Q9NW68	430 aa	Predicted RBP	7.04	□□□□□ -1.28
SEC13-219	ENST00000492602	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	PDE8A	O60658	829 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	KCNJ4	P48050	445 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	RTP1	P59025	263 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	CNGB1	Q14028	1251 aa	Predicted RBP	7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	ADGRE1	Q14246	886 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	MIGA2	Q7L4E1	593 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	TRIB2	Q92519	343 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	JARID2	Q92833	1246 aa	Predicted RBP	7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	FBXL18	Q96ME1	805 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	FOXD4L1	Q9NU39	408 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	ATP11B	Q9Y2G3	1177 aa		7.03	□□□□□ -1.28
SEC13-219	ENST00000492602	PRR33	A8MZF0	331 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	ST18	O60284	1047 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	CYP2B6	P20813	491 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	CACNB3	P54284	484 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	FKBP1A	P62942	108 aa	Known RBP	7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	MAP3K21	Q5TCX8	1036 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	DCAF15	Q66K64	600 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	LHX8	Q68G74	356 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	GADL1	Q6ZQY3	521 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	FASTKD5	Q7L8L6	764 aa	Known RBP	7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	DZIP1L	Q8IYY4	767 aa	Known RBP	7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	MICALL1	Q8N3F8	863 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	HOOK2	Q96ED9	719 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	ZNF341	Q9BYN7	854 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	RNF216	Q9NWF9	866 aa	Predicted RBP	7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	TSPYL4	Q9UJ04	414 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	GJD2	Q9UKL4	321 aa		7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	TTF2	Q9UNY4	1162 aa	Known RBP	7.02	□□□□□ -1.29
SEC13-219	ENST00000492602	CACNA1G	O43497	2377 aa		7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	PI4K2B	G5E9Z4	385 aa		7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	CXCL11	O14625	94 aa		7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	CCND3	P30281	292 aa	Predicted RBP	7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	TRIM28	Q13263	835 aa	Known RBP	7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	SKIV2L	Q15477	1246 aa	Known RBP	7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	ANKRD2	Q9GZV1	360 aa		7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	SERPINA10	Q9UK55	444 aa		7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	NUDC	Q9Y266	331 aa		7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	DOCK3	Q8IZD9	2030 aa		7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	LTBP2	Q14767	1821 aa		7.01	□□□□□ -1.29
SEC13-219	ENST00000492602	IGHMBP2	P38935	993 aa	Known RBP	7	□□□□□ -1.29
SEC13-219	ENST00000492602	CRK	P46108	304 aa		7	□□□□□ -1.29
SEC13-219	ENST00000492602	EPHB4	P54760	987 aa		7	□□□□□ -1.29
SEC13-219	ENST00000492602	CACNB2	Q08289	660 aa	Predicted RBP	7	□□□□□ -1.29
SEC13-219	ENST00000492602	FAM110C	Q1W6H9	321 aa		7	□□□□□ -1.29
SEC13-219	ENST00000492602	CCDC129	Q6ZRS4	1044 aa		7	□□□□□ -1.29
SEC13-219	ENST00000492602	GREM2	Q9H772	168 aa		7	□□□□□ -1.29
SEC13-219	ENST00000492602	CHPF2	Q9P2E5	772 aa		7	□□□□□ -1.29
SEC13-219	ENST00000492602	DNAH12	Q6ZR08	3092 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602		A0A0G2JLL6	359 aa	Predicted RBP	6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	TRIM43B	A6NCK2	446 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	SNAP23	O00161	211 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	PCCA	P05165	728 aa	Predicted RBP	6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	IL1R1	P14778	569 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	PBX2	P40425	430 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	CTSW	P56202	376 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	CSPP1	Q1MSJ5	1256 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	ZNF804A	Q7Z570	1209 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	SH3RF1	Q7Z6J0	888 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	TRIM43	Q96BQ3	446 aa	Predicted RBP	6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	CFAP53	Q96M91	514 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	PHOX2B	Q99453	314 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	PBX4	Q9BYU1	374 aa		6.99	□□□□□ -1.29
SEC13-219	ENST00000492602	KCNH6	Q9H252	994 aa		6.99	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms