RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 FXR1P51114 621 aaKnown RBP eCLIP12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 FKBP5Q13451 457 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 CCL15Q16663 113 aa12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 CCDC57Q2TAC2 916 aa12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 TWISTNBQ3B726 338 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 CERS5Q8N5B7 392 aa12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 LINS1Q8NG48 757 aa12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 ZNF333Q96JL9 665 aa12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 PTPN18Q99952 460 aa12.38□□□□□ -0.43
TNFRSF9-203ENST00000492571 PLIN1O60240 522 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 GNRH1P01148 92 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 LDHAL6AQ6ZMR3 332 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 OXER1Q8TDS5 423 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 SERPINA10Q9UK55 444 aa12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 TTF2Q9UNY4 1162 aaKnown RBP12.37□□□□□ -0.43
TNFRSF9-203ENST00000492571 MKI67P46013 3256 aaKnown RBP12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 GJA5P36382 358 aa12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 PRMT2P55345 433 aa12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 FLIIQ13045 1269 aa12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 MFSD14BQ5SR56 506 aa12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 PPP1R15BQ5SWA1 713 aa12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 ZNF70Q9UC06 446 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 JAG2Q9Y219 1238 aa12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 PCDHAC2Q9Y5I4 1007 aa12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 PTCH2Q9Y6C5 1203 aa12.36□□□□□ -0.43
TNFRSF9-203ENST00000492571 PSME4Q14997 1843 aa12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 SNAP23O00161 211 aa12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 CETPP11597 493 aa12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 HOXD10P28358 340 aa12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 VPS37DQ86XT2 251 aa12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 DPF3Q92784 378 aa12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 TSR2Q969E8 191 aaKnown RBP12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 TDRD3Q9H7E2 651 aaKnown RBP12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 TMOD2Q9NZR1 351 aa12.35□□□□□ -0.43
TNFRSF9-203ENST00000492571 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 ARHGAP33O14559 1287 aa12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 TBC1D12O60347 775 aa12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 FRAT2O75474 233 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 HIBADHP31937 336 aaKnown RBP12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 VGLL4Q14135 290 aa12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 G2E3Q7L622 706 aa12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 DZIP1LQ8IYY4 767 aaKnown RBP12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 BRI3BPQ8WY22 251 aa12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 ZCCHC17Q9NP64 241 aaKnown RBP12.34□□□□□ -0.43
TNFRSF9-203ENST00000492571 CENPFP49454 3210 aa12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 H0YGN5 161 aa12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 TLR2O60603 784 aa12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 CASP7P55210 303 aa12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 SNAPC2Q13487 334 aa12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 LMBR1LQ6UX01 489 aa12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 ERO1BQ86YB8 467 aa12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 FAM205AQ6ZU69 1335 aa12.33□□□□□ -0.44
TNFRSF9-203ENST00000492571 HTTP42858 3142 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 SSC5DA1L4H1 1573 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 PDE4AP27815 886 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 CRKP46108 304 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 PSEN2P49810 448 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 LACTBP83111 547 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 UBE4AQ14139 1066 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 FAM43AQ8N2R8 423 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 SH3TC2Q8TF17 1288 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 HTATIP2Q9BUP3 242 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 TMEM39BQ9GZU3 492 aa12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 PRKRIP1Q9H875 184 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 C9orf78Q9NZ63 289 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF9-203ENST00000492571 SPDYE5A6NIY4 337 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 FOXO4P98177 505 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 CAVIN4Q5BKX8 364 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 DMRTA1Q5VZB9 504 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 DCAF15Q66K64 600 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 TDRD7Q8NHU6 1098 aaKnown RBP12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 RAET1EQ8TD07 263 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 BIN2Q9UBW5 565 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 NR2E3Q9Y5X4 410 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 IRS2Q9Y4H2 1338 aa12.31□□□□□ -0.44
TNFRSF9-203ENST00000492571 KIAA0100Q14667 2235 aaKnown RBP12.3□□□□□ -0.44
TNFRSF9-203ENST00000492571 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF9-203ENST00000492571 GYG1P46976 350 aa12.3□□□□□ -0.44
TNFRSF9-203ENST00000492571 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
TNFRSF9-203ENST00000492571 CCDC27Q2M243 656 aa12.3□□□□□ -0.44
TNFRSF9-203ENST00000492571 TEPSINQ96N21 525 aa12.3□□□□□ -0.44
TNFRSF9-203ENST00000492571 WRNIP1Q96S55 665 aa12.3□□□□□ -0.44
TNFRSF9-203ENST00000492571 BTBD19C9JJ37 291 aa12.29□□□□□ -0.44
TNFRSF9-203ENST00000492571 GRM8O00222 908 aa12.29□□□□□ -0.44
TNFRSF9-203ENST00000492571 UBXN2AP68543 259 aa12.29□□□□□ -0.44
TNFRSF9-203ENST00000492571 ADGRD1Q6QNK2 874 aa12.29□□□□□ -0.44
TNFRSF9-203ENST00000492571 WWC1Q8IX03 1113 aa12.29□□□□□ -0.44
TNFRSF9-203ENST00000492571 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms