RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 ZDHHC15Q96MV8 337 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 MKRN1Q9UHC7 482 aaKnown RBP16.35■□□□□ 0.21
PTPRE-210ENST00000492479 PALD1Q9ULE6 856 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 LAMB1P07942 1786 aa16.34■□□□□ 0.21
PTPRE-210ENST00000492479 PSMD14O00487 310 aa16.34■□□□□ 0.21
PTPRE-210ENST00000492479 SLC27A2O14975 620 aa16.34■□□□□ 0.21
PTPRE-210ENST00000492479 FGAP02671 866 aa16.34■□□□□ 0.21
PTPRE-210ENST00000492479 YBX3P16989 372 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTPRE-210ENST00000492479 RPS12P25398 132 aaKnown RBP16.34■□□□□ 0.21
PTPRE-210ENST00000492479 CXCL9Q07325 125 aa16.34■□□□□ 0.21
PTPRE-210ENST00000492479 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
PTPRE-210ENST00000492479 CRNKL1Q9BZJ0 848 aaKnown RBP16.34■□□□□ 0.21
PTPRE-210ENST00000492479 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
PTPRE-210ENST00000492479 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
PTPRE-210ENST00000492479 TTF2Q9UNY4 1162 aaKnown RBP16.34■□□□□ 0.21
PTPRE-210ENST00000492479 SNX14Q9Y5W7 946 aa16.34■□□□□ 0.21
PTPRE-210ENST00000492479 ADAMTSL1Q8N6G6 1762 aa16.33■□□□□ 0.21
PTPRE-210ENST00000492479 ZKSCAN1P17029 563 aaPredicted RBP16.33■□□□□ 0.2
PTPRE-210ENST00000492479 RHBDL3P58872 404 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 KRT32Q14532 448 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 TNIP1Q15025 636 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 RASEFQ8IZ41 740 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 IFNL3Q8IZI9 196 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 MTMR14Q8NCE2 650 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 MXD3Q9BW11 206 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.2
PTPRE-210ENST00000492479 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
PTPRE-210ENST00000492479 CYP21A2P08686 494 aa16.32■□□□□ 0.2
PTPRE-210ENST00000492479 DYNLL1P63167 89 aaKnown RBP16.32■□□□□ 0.2
PTPRE-210ENST00000492479 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
PTPRE-210ENST00000492479 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
PTPRE-210ENST00000492479 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
PTPRE-210ENST00000492479 ZC3H4Q9UPT8 1303 aaKnown RBP16.31■□□□□ 0.2
PTPRE-210ENST00000492479 BTDP43251 543 aa16.31■□□□□ 0.2
PTPRE-210ENST00000492479 CRKP46108 304 aa16.31■□□□□ 0.2
PTPRE-210ENST00000492479 SBK1Q52WX2 424 aa16.31■□□□□ 0.2
PTPRE-210ENST00000492479 APOBEC3HQ6NTF7 200 aaKnown RBP16.31■□□□□ 0.2
PTPRE-210ENST00000492479 DPF2Q92785 391 aa16.31■□□□□ 0.2
PTPRE-210ENST00000492479 FBXW7Q969H0 707 aa16.31■□□□□ 0.2
PTPRE-210ENST00000492479 SNX21Q969T3 373 aa16.31■□□□□ 0.2
PTPRE-210ENST00000492479 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
PTPRE-210ENST00000492479 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
PTPRE-210ENST00000492479 PRKAB2O43741 272 aa16.3■□□□□ 0.2
PTPRE-210ENST00000492479 RAD17O75943 681 aa16.3■□□□□ 0.2
PTPRE-210ENST00000492479 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
PTPRE-210ENST00000492479 NT5C2P49902 561 aa16.3■□□□□ 0.2
PTPRE-210ENST00000492479 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
PTPRE-210ENST00000492479 ARHGAP27Q6ZUM4 889 aa16.3■□□□□ 0.2
PTPRE-210ENST00000492479 KIAA0825Q8IV33 1275 aa16.3■□□□□ 0.2
PTPRE-210ENST00000492479 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
PTPRE-210ENST00000492479 DCP1AQ9NPI6 582 aaPredicted RBP16.3■□□□□ 0.2
PTPRE-210ENST00000492479 COL2A1P02458 1487 aaPredicted RBP16.29■□□□□ 0.2
PTPRE-210ENST00000492479 ROBO3Q96MS0 1386 aa16.29■□□□□ 0.2
PTPRE-210ENST00000492479 PCP11498 1178 aaKnown RBP16.29■□□□□ 0.2
PTPRE-210ENST00000492479 PSMA5P28066 241 aa16.29■□□□□ 0.2
PTPRE-210ENST00000492479 EIF6P56537 245 aaKnown RBP16.29■□□□□ 0.2
PTPRE-210ENST00000492479 ZNF280AP59817 542 aaPredicted RBP16.29■□□□□ 0.2
PTPRE-210ENST00000492479 SH3RF3Q8TEJ3 882 aaPredicted RBP16.29■□□□□ 0.2
PTPRE-210ENST00000492479 NAPBQ9H115 298 aa16.29■□□□□ 0.2
PTPRE-210ENST00000492479 ALDH8A1Q9H2A2 487 aaPredicted RBP16.29■□□□□ 0.2
PTPRE-210ENST00000492479 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
PTPRE-210ENST00000492479 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
PTPRE-210ENST00000492479 MYH1P12882 1939 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 GRIN3BO60391 1043 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 FGRP09769 529 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 USP17L8P0C7I0 530 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 SDR42E1Q8WUS8 393 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 IDI2Q9BXS1 227 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 ARPP21Q9UBL0 812 aaPredicted RBP16.28■□□□□ 0.2
PTPRE-210ENST00000492479 HDAC9Q9UKV0 1011 aa16.28■□□□□ 0.2
PTPRE-210ENST00000492479 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 F8W031 263 aaPredicted RBP16.27■□□□□ 0.2
PTPRE-210ENST00000492479 ZNF213O14771 459 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.2
PTPRE-210ENST00000492479 APPP05067 770 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 HMGB1P09429 215 aaKnown RBP16.27■□□□□ 0.2
PTPRE-210ENST00000492479 TDO2P48775 406 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 ADCK5Q3MIX3 580 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 STOX1Q6ZVD7 989 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 FBXL16Q8N461 479 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 STAG1Q8WVM7 1258 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 TTC14Q96N46 770 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.2
PTPRE-210ENST00000492479 FLT1P17948 1338 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 ZNF541Q9H0D2 1346 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 E7EWF7 191 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 SCNN1DP51172 638 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 FKBP1CQ5VVH2 108 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 CDC42EP5Q6NZY7 148 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 TEX11Q8IYF3 940 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms