RNA–Protein interactions for RNA: ENST00000491907.5

CCNB3-207, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 310 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-207ENST00000491907 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.25□□□□□ -0.29
CCNB3-207ENST00000491907 SH3RF1Q7Z6J0 888 aa13.25□□□□□ -0.29
CCNB3-207ENST00000491907 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
CCNB3-207ENST00000491907 ATP11BQ9Y2G3 1177 aa13.25□□□□□ -0.29
CCNB3-207ENST00000491907 MTCH2Q9Y6C9 303 aa13.25□□□□□ -0.29
CCNB3-207ENST00000491907 TRIM43BA6NCK2 446 aa13.24□□□□□ -0.29
CCNB3-207ENST00000491907 SUPT20HL1Q3ZLR7 823 aa13.24□□□□□ -0.29
CCNB3-207ENST00000491907 TRIM43Q96BQ3 446 aaPredicted RBP13.24□□□□□ -0.29
CCNB3-207ENST00000491907 NLRP3Q96P20 1036 aa13.24□□□□□ -0.29
CCNB3-207ENST00000491907 LRRC37AA6NMS7 1700 aa13.24□□□□□ -0.29
CCNB3-207ENST00000491907 BMP8AQ7Z5Y6 402 aa13.23□□□□□ -0.29
CCNB3-207ENST00000491907 NKX2-4Q9H2Z4 354 aa13.23□□□□□ -0.29
CCNB3-207ENST00000491907 GAKO14976 1311 aa13.22□□□□□ -0.29
CCNB3-207ENST00000491907 TNPO2O14787 897 aaKnown RBP13.22□□□□□ -0.29
CCNB3-207ENST00000491907 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
CCNB3-207ENST00000491907 NBL1P41271 181 aa13.22□□□□□ -0.29
CCNB3-207ENST00000491907 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
CCNB3-207ENST00000491907 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
CCNB3-207ENST00000491907 EYA3Q99504 573 aa13.22□□□□□ -0.29
CCNB3-207ENST00000491907 HELZ2Q9BYK8 2649 aaKnown RBP13.22□□□□□ -0.29
CCNB3-207ENST00000491907 TEP1Q99973 2627 aaKnown RBP13.21□□□□□ -0.29
CCNB3-207ENST00000491907 PDHXO00330 501 aa13.21□□□□□ -0.29
CCNB3-207ENST00000491907 IL9P15248 144 aa13.21□□□□□ -0.29
CCNB3-207ENST00000491907 VGLL4Q14135 290 aa13.21□□□□□ -0.29
CCNB3-207ENST00000491907 SUSD4Q5VX71 490 aa13.21□□□□□ -0.29
CCNB3-207ENST00000491907 KRT40Q6A162 431 aa13.21□□□□□ -0.29
CCNB3-207ENST00000491907 PBXIP1Q96AQ6 731 aa13.21□□□□□ -0.29
CCNB3-207ENST00000491907 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
CCNB3-207ENST00000491907 G3V3G9 751 aa13.2□□□□□ -0.3
CCNB3-207ENST00000491907 POU3F3P20264 500 aaPredicted RBP13.2□□□□□ -0.3
CCNB3-207ENST00000491907 IRS1P35568 1242 aa13.2□□□□□ -0.3
CCNB3-207ENST00000491907 PKN1Q16512 942 aa13.2□□□□□ -0.3
CCNB3-207ENST00000491907 DCAF8Q5TAQ9 597 aa13.2□□□□□ -0.3
CCNB3-207ENST00000491907 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
CCNB3-207ENST00000491907 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
CCNB3-207ENST00000491907 KCNH4Q9UQ05 1017 aa13.2□□□□□ -0.3
CCNB3-207ENST00000491907 GBF1Q92538 1859 aa13.19□□□□□ -0.3
CCNB3-207ENST00000491907 GPSM2P81274 684 aa13.19□□□□□ -0.3
CCNB3-207ENST00000491907 SNAPC2Q13487 334 aa13.19□□□□□ -0.3
CCNB3-207ENST00000491907 GRAPQ13588 217 aa13.19□□□□□ -0.3
CCNB3-207ENST00000491907 LHX8Q68G74 356 aa13.19□□□□□ -0.3
CCNB3-207ENST00000491907 SUGP1Q8IWZ8 645 aaKnown RBP13.19□□□□□ -0.3
CCNB3-207ENST00000491907 GRAPLQ8TC17 118 aaPredicted RBP13.19□□□□□ -0.3
CCNB3-207ENST00000491907 ZC3H12CQ9C0D7 883 aaKnown RBP13.19□□□□□ -0.3
CCNB3-207ENST00000491907 SLC28A3Q9HAS3 691 aa13.19□□□□□ -0.3
CCNB3-207ENST00000491907 DLL3Q9NYJ7 618 aa13.19□□□□□ -0.3
CCNB3-207ENST00000491907 PPP2R3BQ9Y5P8 575 aa13.19□□□□□ -0.3
CCNB3-207ENST00000491907 UBN2Q6ZU65 1347 aa13.18□□□□□ -0.3
CCNB3-207ENST00000491907 RFXAPO00287 272 aa13.18□□□□□ -0.3
CCNB3-207ENST00000491907 KRT38O76015 456 aa13.18□□□□□ -0.3
CCNB3-207ENST00000491907 ANKRD23Q86SG2 305 aa13.18□□□□□ -0.3
CCNB3-207ENST00000491907 NKD2Q969F2 451 aaPredicted RBP13.18□□□□□ -0.3
CCNB3-207ENST00000491907 ZBED3Q96IU2 234 aaPredicted RBP13.18□□□□□ -0.3
CCNB3-207ENST00000491907 HNRNPABQ99729 332 aaKnown RBP13.18□□□□□ -0.3
CCNB3-207ENST00000491907 MSRAQ9UJ68 235 aa13.18□□□□□ -0.3
CCNB3-207ENST00000491907 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
CCNB3-207ENST00000491907 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
CCNB3-207ENST00000491907 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
CCNB3-207ENST00000491907 AK9Q5TCS8 1911 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 USP17L3A6NCW0 530 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 USP17L4A6NCW7 530 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 IRF6O14896 467 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 NTSR2O95665 410 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 GPTP24298 496 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 USP17L1Q7RTZ2 530 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 TBC1D16Q8TBP0 767 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
CCNB3-207ENST00000491907 COL4A1P02462 1669 aa13.17□□□□□ -0.3
CCNB3-207ENST00000491907 ZNF462Q96JM2 2506 aa13.16□□□□□ -0.3
CCNB3-207ENST00000491907 NUP98P52948 1817 aa13.16□□□□□ -0.3
CCNB3-207ENST00000491907 RLFQ13129 1914 aa13.16□□□□□ -0.3
CCNB3-207ENST00000491907 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
CCNB3-207ENST00000491907 VCPP55072 806 aaKnown RBP13.16□□□□□ -0.3
CCNB3-207ENST00000491907 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
CCNB3-207ENST00000491907 RAB30Q15771 203 aa13.16□□□□□ -0.3
CCNB3-207ENST00000491907 MAP3K21Q5TCX8 1036 aa13.16□□□□□ -0.3
CCNB3-207ENST00000491907 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
CCNB3-207ENST00000491907 SPEGQ15772 3267 aa13.15□□□□□ -0.3
CCNB3-207ENST00000491907 AOX1Q06278 1338 aa13.15□□□□□ -0.3
CCNB3-207ENST00000491907 CYP2C8P10632 490 aa13.15□□□□□ -0.3
CCNB3-207ENST00000491907 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
CCNB3-207ENST00000491907 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
CCNB3-207ENST00000491907 COA7Q96BR5 231 aa13.15□□□□□ -0.3
CCNB3-207ENST00000491907 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
CCNB3-207ENST00000491907 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.31
CCNB3-207ENST00000491907 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
CCNB3-207ENST00000491907 FPGSQ05932 587 aa13.14□□□□□ -0.31
CCNB3-207ENST00000491907 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
CCNB3-207ENST00000491907 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
CCNB3-207ENST00000491907 KIAA2013Q8IYS2 634 aa13.14□□□□□ -0.31
CCNB3-207ENST00000491907 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCNB3-207ENST00000491907 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
CCNB3-207ENST00000491907 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
CCNB3-207ENST00000491907 TMEM221A6NGB7 291 aa13.13□□□□□ -0.31
CCNB3-207ENST00000491907 M0R296 226 aa13.13□□□□□ -0.31
CCNB3-207ENST00000491907 TRIM60Q495X7 471 aa13.13□□□□□ -0.31
CCNB3-207ENST00000491907 FRMD5Q7Z6J6 570 aa13.13□□□□□ -0.31
CCNB3-207ENST00000491907 FBXL6Q8N531 539 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms