RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZAP70P43403 619 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 MOB2Q70IA6 237 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 SAPCD2Q86UD0 394 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 APOBEC3FQ8IUX4 373 aaKnown RBP11.39□□□□□ -0.59
BRCA1-219ENST00000491747 TBC1D2Q9BYX2 928 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 DEFB129Q9H1M3 183 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 MAST2Q6P0Q8 1798 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 MECOMQ03112 1051 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 DEFB115Q30KQ5 88 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 CLASRPQ8N2M8 674 aaKnown RBP11.39□□□□□ -0.59
BRCA1-219ENST00000491747 FZD1Q9UP38 647 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 SSC5DA1L4H1 1573 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 TCP10L2B9ZVM9 353 aa11.38□□□□□ -0.59
BRCA1-219ENST00000491747 VEGFBP49765 207 aa11.38□□□□□ -0.59
BRCA1-219ENST00000491747 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
BRCA1-219ENST00000491747 ZGPATQ8N5A5 531 aaKnown RBP11.38□□□□□ -0.59
BRCA1-219ENST00000491747 LRRCC1Q9C099 1032 aa11.38□□□□□ -0.59
BRCA1-219ENST00000491747 GBA2Q9HCG7 927 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-219ENST00000491747 PIH1D3Q9NQM4 214 aaKnown RBP11.38□□□□□ -0.59
BRCA1-219ENST00000491747 PAPPA2Q9BXP8 1791 aa11.38□□□□□ -0.59
BRCA1-219ENST00000491747 RASA3Q14644 834 aa11.38□□□□□ -0.59
BRCA1-219ENST00000491747 CDC42EP5Q6NZY7 148 aa11.38□□□□□ -0.59
BRCA1-219ENST00000491747 NSUN4Q96CB9 384 aaKnown RBP11.38□□□□□ -0.59
BRCA1-219ENST00000491747 CDK5RAP2Q96SN8 1893 aa11.37□□□□□ -0.59
BRCA1-219ENST00000491747 IFIT2P09913 472 aaKnown RBP11.37□□□□□ -0.59
BRCA1-219ENST00000491747 SPTY2D1Q68D10 685 aaPredicted RBP11.37□□□□□ -0.59
BRCA1-219ENST00000491747 CYP4F22Q6NT55 531 aa11.37□□□□□ -0.59
BRCA1-219ENST00000491747 DZIP1Q86YF9 867 aaKnown RBP11.37□□□□□ -0.59
BRCA1-219ENST00000491747 TEPSINQ96N21 525 aa11.37□□□□□ -0.59
BRCA1-219ENST00000491747 GAKO14976 1311 aa11.37□□□□□ -0.59
BRCA1-219ENST00000491747 PCNTO95613 3336 aa11.37□□□□□ -0.59
BRCA1-219ENST00000491747 NBPF12Q5TAG4 269 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-219ENST00000491747 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 HUNKP57058 714 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 PRKG1Q13976 671 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 JMYQ8N9B5 988 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 FAM163AQ96GL9 167 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-219ENST00000491747 TMEM39BQ9GZU3 492 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 RAI14Q9P0K7 980 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 LRP2BPQ9P2M1 347 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 OTOFQ9HC10 1997 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 THSD7BQ9C0I4 1608 aa11.36□□□□□ -0.59
BRCA1-219ENST00000491747 MROH7-TTC4A0A0A0MT08 1334 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 NFIAQ12857 509 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 USP40Q9NVE5 1235 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 AK9Q5TCS8 1911 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
BRCA1-219ENST00000491747 UBE2Q2LH0YL09 131 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 BTDP43251 543 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 HDAC1Q13547 482 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-219ENST00000491747 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 EDC3Q96F86 508 aaKnown RBP11.35□□□□□ -0.59
BRCA1-219ENST00000491747 CAPNS2Q96L46 248 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 FAM198AQ9UFP1 575 aa11.35□□□□□ -0.59
BRCA1-219ENST00000491747 GPR75-ASB3A0A0A6YYF3 556 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
BRCA1-219ENST00000491747 GRM1Q13255 1194 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-219ENST00000491747 ZFPM1Q8IX07 1006 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 HHIPL1Q96JK4 782 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 C22orf23Q9BZE7 217 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 FOCADQ5VW36 1801 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 AOC2O75106 756 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 RHBDL3P58872 404 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 OTUD7AQ8TE49 926 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-219ENST00000491747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.34□□□□□ -0.59
BRCA1-219ENST00000491747 ZIC5Q96T25 663 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 BOLA2Q9H3K6 86 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 CHMP5Q9NZZ3 219 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 MYH7P12883 1935 aa11.34□□□□□ -0.59
BRCA1-219ENST00000491747 RFX7Q2KHR2 1363 aa11.33□□□□□ -0.59
BRCA1-219ENST00000491747 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 FAM155AB1AL88 458 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-219ENST00000491747 ATP5JP18859 108 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 MCM4P33991 863 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 TCP10Q12799 353 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 FKBP1CQ5VVH2 108 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 TSHZ3Q63HK5 1081 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 RGMBQ6NW40 437 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 FAM83AQ86UY5 434 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 USP2O75604 605 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-219ENST00000491747 NF2P35240 595 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 TNNI2P48788 182 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 FKBP1BP68106 108 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 TTLL12Q14166 644 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-219ENST00000491747 NAA16Q6N069 864 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-219ENST00000491747 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
BRCA1-219ENST00000491747 DDX4Q9NQI0 724 aaKnown RBP11.33□□□□□ -0.6
BRCA1-219ENST00000491747 TMOD2Q9NZR1 351 aa11.33□□□□□ -0.6
BRCA1-219ENST00000491747 ANGEL1Q9UNK9 670 aaKnown RBP11.33□□□□□ -0.6
BRCA1-219ENST00000491747 GOLIM4O00461 696 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 WDHD1O75717 1129 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-219ENST00000491747 IDH1O75874 414 aaKnown RBP11.32□□□□□ -0.6
BRCA1-219ENST00000491747 GSTO1P78417 241 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 SUPT20HL1Q3ZLR7 823 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 FAM151AQ8WW52 585 aa11.32□□□□□ -0.6
BRCA1-219ENST00000491747 LDHCP07864 332 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms