RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
HDAC3-211ENST00000491581 FAM198AQ9UFP1 575 aa11.1□□□□□ -0.63
HDAC3-211ENST00000491581 CDK5RAP2Q96SN8 1893 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 A0A1B0GUL7 405 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 MANSC4A6NHS7 340 aaPredicted RBP11.09□□□□□ -0.63
HDAC3-211ENST00000491581 FKTNO75072 461 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 CIAO1O76071 339 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 MMP14P50281 582 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 CCDC84Q86UT8 332 aaPredicted RBP11.09□□□□□ -0.63
HDAC3-211ENST00000491581 TBC1D22AQ8WUA7 517 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 XAGE2Q96GT9 111 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 WRNIP1Q96S55 665 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 ARHGAP39Q9C0H5 1083 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 COPRSQ9NQ92 184 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 PHIPQ8WWQ0 1821 aa11.09□□□□□ -0.63
HDAC3-211ENST00000491581 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 FAM196BA6NMK8 535 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 MYCP01106 439 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-211ENST00000491581 ZBTB48P10074 688 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-211ENST00000491581 IL15P40933 162 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-211ENST00000491581 MAP3K9P80192 1104 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 TNFAIP1Q13829 316 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 CCL15Q16663 113 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 ATF7IPQ6VMQ6 1270 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 OTOP1Q7RTM1 612 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 REM2Q8IYK8 340 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-211ENST00000491581 NEUROD6Q96NK8 337 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
HDAC3-211ENST00000491581 USP40Q9NVE5 1235 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 ABCF2Q9UG63 623 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 TRIM17Q9Y577 477 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 KIF16BQ96L93 1317 aa11.08□□□□□ -0.64
HDAC3-211ENST00000491581 ATAD5Q96QE3 1844 aa11.07□□□□□ -0.64
HDAC3-211ENST00000491581 HTTP42858 3142 aa11.07□□□□□ -0.64
HDAC3-211ENST00000491581 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
HDAC3-211ENST00000491581 IRF6O14896 467 aa11.07□□□□□ -0.64
HDAC3-211ENST00000491581 LDHBP07195 334 aaKnown RBP11.07□□□□□ -0.64
HDAC3-211ENST00000491581 TNNI2P48788 182 aa11.07□□□□□ -0.64
HDAC3-211ENST00000491581 HDLBPQ00341 1268 aaKnown RBP11.07□□□□□ -0.64
HDAC3-211ENST00000491581 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
HDAC3-211ENST00000491581 HHIPL2Q6UWX4 724 aa11.07□□□□□ -0.64
HDAC3-211ENST00000491581 WDR66Q8TBY9 1149 aa11.07□□□□□ -0.64
HDAC3-211ENST00000491581 SNRKQ9NRH2 765 aa11.07□□□□□ -0.64
HDAC3-211ENST00000491581 CENPFP49454 3210 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 PTPRFP10586 1907 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-211ENST00000491581 SPDYE5A6NIY4 337 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 BTBD19C9JJ37 291 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 CT47B1P0C2W7 299 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-211ENST00000491581 CTGFP29279 349 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 RGS3P49796 1198 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 PICALMQ13492 652 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-211ENST00000491581 CFHR5Q9BXR6 569 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 HMG20BQ9P0W2 317 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 NDUFB9Q9Y6M9 179 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 DOCK1Q14185 1865 aa11.06□□□□□ -0.64
HDAC3-211ENST00000491581 RFX7Q2KHR2 1363 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 ATRNL1Q5VV63 1379 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 DDTLA6NHG4 134 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-211ENST00000491581 MECOMQ03112 1051 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 FBXO46Q6PJ61 603 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-211ENST00000491581 CHRDL2Q6WN34 429 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 FAM83AQ86UY5 434 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 FAM151AQ8WW52 585 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 ARHGAP45Q92619 1136 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 TLR7Q9NYK1 1049 aaKnown RBP11.05□□□□□ -0.64
HDAC3-211ENST00000491581 TMOD2Q9NZR1 351 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 CSADQ9Y600 493 aa11.05□□□□□ -0.64
HDAC3-211ENST00000491581 BRCA2P51587 3418 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 MAST2Q6P0Q8 1798 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 WDHD1O75717 1129 aaPredicted RBP11.04□□□□□ -0.64
HDAC3-211ENST00000491581 GNAI2P04899 355 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 GNAI3P08754 354 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 MCAMP43121 646 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 BTDP43251 543 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 MTX1Q13505 466 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 MOGSQ13724 837 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
HDAC3-211ENST00000491581 SHROOM1Q2M3G4 852 aaPredicted RBP11.04□□□□□ -0.64
HDAC3-211ENST00000491581 PANK1Q8TE04 598 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 DBNDD2Q9BQY9 259 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 DENND2AQ9ULE3 1009 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 MAST3O60307 1309 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 SALL1Q9NSC2 1324 aa11.04□□□□□ -0.64
HDAC3-211ENST00000491581 INHBEP58166 350 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 SP3Q02447 781 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 RRP1BQ14684 758 aaKnown RBP11.03□□□□□ -0.64
HDAC3-211ENST00000491581 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 ADGRA1Q86SQ6 560 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 DZIP1Q86YF9 867 aaKnown RBP11.03□□□□□ -0.64
HDAC3-211ENST00000491581 MRIQ9BWK5 157 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 ZNF341Q9BYN7 854 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 BCL11AQ9H165 835 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 CPA4Q9UI42 421 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 PTPN22Q9Y2R2 807 aa11.03□□□□□ -0.64
HDAC3-211ENST00000491581 SUGT1Q9Y2Z0 365 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms