RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 WRNIP1Q96S55 665 aa10.29□□□□□ -0.76
APP-216ENST00000491395 USP40Q9NVE5 1235 aa10.29□□□□□ -0.76
APP-216ENST00000491395 DENND2AQ9ULE3 1009 aa10.29□□□□□ -0.76
APP-216ENST00000491395 TRIM17Q9Y577 477 aa10.29□□□□□ -0.76
APP-216ENST00000491395 SNCAIPQ9Y6H5 919 aa10.29□□□□□ -0.76
APP-216ENST00000491395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.29□□□□□ -0.76
APP-216ENST00000491395 SPDYE5A6NIY4 337 aa10.28□□□□□ -0.76
APP-216ENST00000491395 SEMA3EO15041 775 aa10.28□□□□□ -0.76
APP-216ENST00000491395 INPP5BP32019 993 aa10.28□□□□□ -0.76
APP-216ENST00000491395 GTF2A2P52657 109 aa10.28□□□□□ -0.76
APP-216ENST00000491395 CAP1Q01518 475 aa10.28□□□□□ -0.76
APP-216ENST00000491395 TCP10Q12799 353 aa10.28□□□□□ -0.76
APP-216ENST00000491395 MTX1Q13505 466 aa10.28□□□□□ -0.76
APP-216ENST00000491395 RASGRF1Q13972 1273 aa10.28□□□□□ -0.76
APP-216ENST00000491395 DCAF15Q66K64 600 aa10.28□□□□□ -0.76
APP-216ENST00000491395 ATF7IPQ6VMQ6 1270 aa10.28□□□□□ -0.76
APP-216ENST00000491395 ERO1BQ86YB8 467 aa10.28□□□□□ -0.76
APP-216ENST00000491395 ZFPM1Q8IX07 1006 aa10.28□□□□□ -0.76
APP-216ENST00000491395 MIER1Q8N108 512 aa10.28□□□□□ -0.76
APP-216ENST00000491395 FAM43AQ8N2R8 423 aa10.28□□□□□ -0.76
APP-216ENST00000491395 HOOK2Q96ED9 719 aa10.28□□□□□ -0.76
APP-216ENST00000491395 ZNF341Q9BYN7 854 aa10.28□□□□□ -0.76
APP-216ENST00000491395 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
APP-216ENST00000491395 SALL1Q9NSC2 1324 aa10.28□□□□□ -0.76
APP-216ENST00000491395 A0A1B0GUL7 405 aa10.27□□□□□ -0.77
APP-216ENST00000491395 IRF6O14896 467 aa10.27□□□□□ -0.77
APP-216ENST00000491395 GNAI2P04899 355 aa10.27□□□□□ -0.77
APP-216ENST00000491395 SP3Q02447 781 aa10.27□□□□□ -0.77
APP-216ENST00000491395 TAF1CQ15572 869 aaPredicted RBP10.27□□□□□ -0.77
APP-216ENST00000491395 XAGE2Q96GT9 111 aa10.27□□□□□ -0.77
APP-216ENST00000491395 ERO1AQ96HE7 468 aa10.27□□□□□ -0.77
APP-216ENST00000491395 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
APP-216ENST00000491395 ABCF2Q9UG63 623 aa10.27□□□□□ -0.77
APP-216ENST00000491395 PNMA6EA0A0J9YXQ4 647 aa10.26□□□□□ -0.77
APP-216ENST00000491395 BTBD19C9JJ37 291 aa10.26□□□□□ -0.77
APP-216ENST00000491395 ZBTB22O15209 634 aa10.26□□□□□ -0.77
APP-216ENST00000491395 CETPP11597 493 aa10.26□□□□□ -0.77
APP-216ENST00000491395 HNRNPUQ00839 825 aaKnown RBP eCLIP10.26□□□□□ -0.77
APP-216ENST00000491395 SNAPC2Q13487 334 aa10.26□□□□□ -0.77
APP-216ENST00000491395 ZKSCAN2Q63HK3 967 aa10.26□□□□□ -0.77
APP-216ENST00000491395 TMEM57Q8N5G2 664 aa10.26□□□□□ -0.77
APP-216ENST00000491395 EFCC1Q9HA90 598 aa10.26□□□□□ -0.77
APP-216ENST00000491395 ZFYVE28Q9HCC9 887 aa10.26□□□□□ -0.77
APP-216ENST00000491395 ZNF112Q9UJU3 913 aa10.26□□□□□ -0.77
APP-216ENST00000491395 AKAP2Q9Y2D5 859 aa10.26□□□□□ -0.77
APP-216ENST00000491395 PTPN22Q9Y2R2 807 aa10.26□□□□□ -0.77
APP-216ENST00000491395 RPAP1Q9BWH6 1393 aaPredicted RBP10.26□□□□□ -0.77
APP-216ENST00000491395 RGS3P49796 1198 aa10.25□□□□□ -0.77
APP-216ENST00000491395 PPATQ06203 517 aa10.25□□□□□ -0.77
APP-216ENST00000491395 G3BP1Q13283 466 aaKnown RBP eCLIP10.25□□□□□ -0.77
APP-216ENST00000491395 PPIL2Q13356 520 aa10.25□□□□□ -0.77
APP-216ENST00000491395 MVPQ14764 893 aaKnown RBP10.25□□□□□ -0.77
APP-216ENST00000491395 SPTY2D1Q68D10 685 aaPredicted RBP10.25□□□□□ -0.77
APP-216ENST00000491395 PI16Q6UXB8 463 aa10.25□□□□□ -0.77
APP-216ENST00000491395 ZGPATQ8N5A5 531 aaKnown RBP10.25□□□□□ -0.77
APP-216ENST00000491395 HMG20BQ9P0W2 317 aa10.25□□□□□ -0.77
APP-216ENST00000491395 GAKO14976 1311 aa10.25□□□□□ -0.77
APP-216ENST00000491395 SLURP2P0DP57 97 aa10.24□□□□□ -0.77
APP-216ENST00000491395 BTDP43251 543 aa10.24□□□□□ -0.77
APP-216ENST00000491395 MECOMQ03112 1051 aa10.24□□□□□ -0.77
APP-216ENST00000491395 GORABQ5T7V8 394 aa10.24□□□□□ -0.77
APP-216ENST00000491395 TBC1D9Q6ZT07 1266 aa10.24□□□□□ -0.77
APP-216ENST00000491395 SH3BP5LQ7L8J4 393 aa10.24□□□□□ -0.77
APP-216ENST00000491395 DZIP1Q86YF9 867 aaKnown RBP10.24□□□□□ -0.77
APP-216ENST00000491395 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.24□□□□□ -0.77
APP-216ENST00000491395 ZNF384Q8TF68 577 aa10.24□□□□□ -0.77
APP-216ENST00000491395 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
APP-216ENST00000491395 IDI2Q9BXS1 227 aa10.24□□□□□ -0.77
APP-216ENST00000491395 PDS5AQ29RF7 1337 aaKnown RBP10.24□□□□□ -0.77
APP-216ENST00000491395 ECM29Q5VYK3 1845 aa10.23□□□□□ -0.77
APP-216ENST00000491395 DDTLA6NHG4 134 aaPredicted RBP10.23□□□□□ -0.77
APP-216ENST00000491395 TLR2O60603 784 aa10.23□□□□□ -0.77
APP-216ENST00000491395 ENTPD3O75355 529 aa10.23□□□□□ -0.77
APP-216ENST00000491395 WDHD1O75717 1129 aaPredicted RBP10.23□□□□□ -0.77
APP-216ENST00000491395 ATP8B2P98198 1209 aa10.23□□□□□ -0.77
APP-216ENST00000491395 PICALMQ13492 652 aa10.23□□□□□ -0.77
APP-216ENST00000491395 POLA2Q14181 598 aa10.23□□□□□ -0.77
APP-216ENST00000491395 NOL9Q5SY16 702 aaKnown RBP10.23□□□□□ -0.77
APP-216ENST00000491395 DIEXFQ68CQ4 756 aaKnown RBP10.23□□□□□ -0.77
APP-216ENST00000491395 ERICH6Q7L0X2 663 aa10.23□□□□□ -0.77
APP-216ENST00000491395 SLF2Q8IX21 1173 aa10.23□□□□□ -0.77
APP-216ENST00000491395 SPATA5Q8NB90 893 aa10.23□□□□□ -0.77
APP-216ENST00000491395 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
APP-216ENST00000491395 DDX4Q9NQI0 724 aaKnown RBP10.23□□□□□ -0.77
APP-216ENST00000491395 KCNH4Q9UQ05 1017 aa10.23□□□□□ -0.77
APP-216ENST00000491395 ARAP2Q8WZ64 1704 aa10.23□□□□□ -0.77
APP-216ENST00000491395 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
APP-216ENST00000491395 GPR75-ASB3A0A0A6YYF3 556 aa10.22□□□□□ -0.77
APP-216ENST00000491395 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
APP-216ENST00000491395 PHF20L1A8MW92 1017 aa10.22□□□□□ -0.77
APP-216ENST00000491395 ECM2O94769 699 aaPredicted RBP10.22□□□□□ -0.77
APP-216ENST00000491395 MOGSQ13724 837 aa10.22□□□□□ -0.77
APP-216ENST00000491395 ANKRD23Q86SG2 305 aa10.22□□□□□ -0.77
APP-216ENST00000491395 ZSCAN29Q8IWY8 852 aaPredicted RBP10.22□□□□□ -0.77
APP-216ENST00000491395 ARMC5Q96C12 935 aa10.22□□□□□ -0.77
APP-216ENST00000491395 ARHGAP39Q9C0H5 1083 aa10.22□□□□□ -0.77
APP-216ENST00000491395 ZCCHC17Q9NP64 241 aaKnown RBP10.22□□□□□ -0.77
APP-216ENST00000491395 SNRKQ9NRH2 765 aa10.22□□□□□ -0.77
APP-216ENST00000491395 RAI14Q9P0K7 980 aa10.22□□□□□ -0.77
APP-216ENST00000491395 CPA4Q9UI42 421 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms