RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 FAM151AQ8WW52 585 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 WRNIP1Q96S55 665 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 TMEM106CQ9BVX2 250 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 FBXO3Q9UK99 471 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 IQSEC3Q9UPP2 1182 aaPredicted RBP10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 KCNH4Q9UQ05 1017 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 PTCH2Q9Y6C5 1203 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 TRIOBPQ9H2D6 2365 aa10.6□□□□□ -0.71
APOBEC3F-204ENST00000491387 EYA2O00167 538 aa10.59□□□□□ -0.71
APOBEC3F-204ENST00000491387 FRAT2O75474 233 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3F-204ENST00000491387 SLC9C1Q4G0N8 1177 aa10.59□□□□□ -0.71
APOBEC3F-204ENST00000491387 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
APOBEC3F-204ENST00000491387 ANKRD23Q86SG2 305 aa10.59□□□□□ -0.71
APOBEC3F-204ENST00000491387 LPIN2Q92539 896 aa10.59□□□□□ -0.71
APOBEC3F-204ENST00000491387 ZKSCAN4Q969J2 545 aaPredicted RBP10.59□□□□□ -0.71
APOBEC3F-204ENST00000491387 ZNF341Q9BYN7 854 aa10.59□□□□□ -0.71
APOBEC3F-204ENST00000491387 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.71
APOBEC3F-204ENST00000491387 SALL1Q9NSC2 1324 aa10.58□□□□□ -0.71
APOBEC3F-204ENST00000491387 KIF22Q14807 665 aa10.58□□□□□ -0.72
APOBEC3F-204ENST00000491387 NOL9Q5SY16 702 aaKnown RBP10.58□□□□□ -0.72
APOBEC3F-204ENST00000491387 ATG9AQ7Z3C6 839 aa10.58□□□□□ -0.72
APOBEC3F-204ENST00000491387 KLHDC4Q8TBB5 520 aa10.58□□□□□ -0.72
APOBEC3F-204ENST00000491387 SSH1Q8WYL5 1049 aa10.58□□□□□ -0.72
APOBEC3F-204ENST00000491387 BRCA2P51587 3418 aa10.58□□□□□ -0.72
APOBEC3F-204ENST00000491387 AK9Q5TCS8 1911 aa10.58□□□□□ -0.72
APOBEC3F-204ENST00000491387 MYH2Q9UKX2 1941 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 E9PSI1 815 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 SEMA3EO15041 775 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 CIAO1O76071 339 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 SLC5A1P13866 664 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 INPP5BP32019 993 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 MOGSQ13724 837 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 ALDH1L2Q3SY69 923 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 ARHGAP39Q9C0H5 1083 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 DAGLAQ9Y4D2 1042 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 CDK5RAP2Q96SN8 1893 aa10.57□□□□□ -0.72
APOBEC3F-204ENST00000491387 CXCL11O14625 94 aa10.56□□□□□ -0.72
APOBEC3F-204ENST00000491387 FXR1P51114 621 aaKnown RBP eCLIP10.56□□□□□ -0.72
APOBEC3F-204ENST00000491387 MAP3K10Q02779 954 aa10.56□□□□□ -0.72
APOBEC3F-204ENST00000491387 SLFN5Q08AF3 891 aa10.56□□□□□ -0.72
APOBEC3F-204ENST00000491387 CDC42EP5Q6NZY7 148 aa10.56□□□□□ -0.72
APOBEC3F-204ENST00000491387 SRRDQ9UH36 339 aa10.56□□□□□ -0.72
APOBEC3F-204ENST00000491387 ATRNL1Q5VV63 1379 aa10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 CTGFP29279 349 aa10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 NFIAQ12857 509 aa10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 SLC4A8Q2Y0W8 1093 aa10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 MIGA2Q7L4E1 593 aa10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 IDI2Q9BXS1 227 aa10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 GNL3LQ9NVN8 582 aaKnown RBP10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 FAM198AQ9UFP1 575 aa10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 PDS5AQ29RF7 1337 aaKnown RBP10.55□□□□□ -0.72
APOBEC3F-204ENST00000491387 RFX7Q2KHR2 1363 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 ZSWIM8A7E2V4 1837 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 PHF20L1A8MW92 1017 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 PDHXO00330 501 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 ENTPD3O75355 529 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 LDHBP07195 334 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 CT47B1P0C2W7 299 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 BCRP11274 1271 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 HOXD10P28358 340 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 PRDX5P30044 214 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 PSMC4P43686 418 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 DIXDC1Q155Q3 683 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 ATP2B3Q16720 1220 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 TRMT2AQ8IZ69 625 aaKnown RBP10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 NKX2-3Q8TAU0 364 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 SH3TC2Q8TF17 1288 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 FAM163AQ96GL9 167 aaPredicted RBP10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 TRIM47Q96LD4 638 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 CEP126Q9P2H0 1117 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 DENND2AQ9ULE3 1009 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 HDAC5Q9UQL6 1122 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 SLC45A1Q9Y2W3 748 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 GAKO14976 1311 aa10.54□□□□□ -0.72
APOBEC3F-204ENST00000491387 GJB1P08034 283 aa10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 CAPN2P17655 700 aa10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 OSBPP22059 807 aa10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 IL15P40933 162 aaPredicted RBP10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 GPAT2Q6NUI2 795 aa10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 SHISA4Q96DD7 197 aa10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 PARK7Q99497 189 aaKnown RBP10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 COPRSQ9NQ92 184 aa10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 USP40Q9NVE5 1235 aa10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 CPA4Q9UI42 421 aa10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
APOBEC3F-204ENST00000491387 DOCK2Q92608 1830 aa10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 A0A0G2JLL6 359 aaPredicted RBP10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 GRK4P32298 578 aa10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 GJA8P48165 433 aa10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 TCP10Q12799 353 aa10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 FASTKD5Q7L8L6 764 aaKnown RBP10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 PRRT2Q7Z6L0 340 aaPredicted RBP10.52□□□□□ -0.73
APOBEC3F-204ENST00000491387 ZFPM1Q8IX07 1006 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms