RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, human

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS72-205	ENST00000491094	ANGEL1	Q9UNK9	670 aa	Known RBP	12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	POLR2D	O15514	142 aa	Known RBP	12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	GRIN1	Q05586	938 aa		12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	NCAPH	Q15003	741 aa		12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	SLC39A14	Q15043	492 aa		12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	NOL10	Q9BSC4	688 aa	Known RBP	12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.84	□□□□□ -0.35
VPS72-205	ENST00000491094	CASP1	P29466	404 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	EVA1C	P58658	441 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	TERF2	Q15554	542 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	CCDC191	Q8NCU4	936 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	SALL1	Q9NSC2	1324 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	BMS1	Q14692	1282 aa	Known RBP	12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	IRX2	Q9BZI1	471 aa	Predicted RBP	12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	LZTFL1	Q9NQ48	299 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	ZNF446	Q9NWS9	450 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	IMPACT	Q9P2X3	320 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	SLC12A7	Q9Y666	1083 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	KIF2A	O00139	706 aa	Predicted RBP	12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	FOXP2	O15409	715 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	MCAM	P43121	646 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	PDE4B	Q07343	736 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	MIGA1	Q8NAN2	632 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	AGXT2	Q9BYV1	514 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	RGPD2	P0DJD1	1756 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	ZNF532	Q9HCE3	1301 aa		12.83	□□□□□ -0.36
VPS72-205	ENST00000491094	SAFB	Q15424	915 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	DNAJC10	Q8IXB1	793 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	NAPB	Q9H115	298 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	GREM2	Q9H772	168 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	MINDY4B	A8MYZ0	360 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	PES1	O00541	588 aa	Known RBP	12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	ITGA6	P23229	1130 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	EVC	P57679	992 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	WWC3	Q9ULE0	1092 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	TBC1D2B	Q9UPU7	963 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	NFE2L3	Q9Y4A8	694 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	PALLD	Q8WX93	1383 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	LRRC37A3	O60309	1634 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	GUCY1A2	P33402	732 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	PHKA1	P46020	1223 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	NR5A1	Q13285	461 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	APOA5	Q6Q788	366 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	ARMT1	Q9H993	441 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	TRMT112	Q9UI30	125 aa	Known RBP	12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	GYS2	P54840	703 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	ARGLU1	Q9NWB6	273 aa	Predicted RBP	12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	SERTAD1	Q9UHV2	236 aa		12.82	□□□□□ -0.36
VPS72-205	ENST00000491094	CASQ1	P31415	396 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	SYCP1	Q15431	976 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	KIF6	Q6ZMV9	814 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	PIH1D3	Q9NQM4	214 aa	Known RBP	12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	CBFA2T2	O43439	604 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	PRKAB2	O43741	272 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	ZFY	P08048	801 aa	Predicted RBP	12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	TDO2	P48775	406 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	SSRP1	Q08945	709 aa	Known RBP	12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	KLHL34	Q8N239	644 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	PUF60	Q9UHX1	559 aa	Known RBP	12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	JCAD	Q9P266	1359 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	SKIDA1	Q1XH10	827 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	USP49	Q70CQ1	688 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	C19orf44	Q9H6X5	657 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	SAMSN1	Q9NSI8	373 aa	Known RBP	12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	NCAPD2	Q15021	1401 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	ADGRL3	Q9HAR2	1447 aa		12.81	□□□□□ -0.36
VPS72-205	ENST00000491094	GABPB1	Q06547	395 aa	Predicted RBP	12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	SLC4A8	Q2Y0W8	1093 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	METTL16	Q86W50	562 aa	Known RBP	12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	DIS3L2	Q8IYB7	885 aa	Known RBP	12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	MAGEB6	Q8N7X4	407 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	BAG1	Q99933	345 aa	Predicted RBP	12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	ASAP1	Q9ULH1	1129 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	MTMR7	Q9Y216	660 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	PRR29	P0C7W0	189 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	MTF1	Q14872	753 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	HLF	Q16534	295 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	DHX58	Q96C10	678 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	WDR24	Q96S15	920 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	CABP5	Q9NP86	173 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	CDKL5	O76039	1030 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	MBD4	O95243	580 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	TCIRG1	Q13488	830 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	ABCF2	Q9UG63	623 aa		12.8	□□□□□ -0.36
VPS72-205	ENST00000491094	ZSWIM5	Q9P217	1185 aa		12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	PPP2R2C	Q9Y2T4	447 aa		12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	MEGF6	O75095	1541 aa		12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	KRBA2	Q6ZNG9	492 aa		12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	TOGARAM2	Q6ZUX3	1019 aa		12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	NEK11	Q8NG66	645 aa		12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	PODXL2	Q9NZ53	605 aa		12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	PSD	A5PKW4	1024 aa	Predicted RBP	12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	PNMA6A	P0CW24	399 aa	Predicted RBP	12.79	□□□□□ -0.36
VPS72-205	ENST00000491094	GPR108	Q9NPR9	543 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms