RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 IFIT1P09914 478 aaKnown RBP25.93■■□□□ 1.74
CLIP2-208ENST00000491075 PPATQ06203 517 aa25.93■■□□□ 1.74
CLIP2-208ENST00000491075 PUM3Q15397 648 aaKnown RBP25.93■■□□□ 1.74
CLIP2-208ENST00000491075 COLQQ9Y215 455 aaPredicted RBP25.92■■□□□ 1.74
CLIP2-208ENST00000491075 C17orf99Q6UX52 265 aa25.91■■□□□ 1.74
CLIP2-208ENST00000491075 ANP32CO43423 234 aa25.9■■□□□ 1.74
CLIP2-208ENST00000491075 FGFR2P21802 821 aa25.9■■□□□ 1.74
CLIP2-208ENST00000491075 ANKRD23Q86SG2 305 aa25.9■■□□□ 1.74
CLIP2-208ENST00000491075 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.9■■□□□ 1.74
CLIP2-208ENST00000491075 KLHDC4Q8TBB5 520 aa25.9■■□□□ 1.74
CLIP2-208ENST00000491075 WDR66Q8TBY9 1149 aa25.9■■□□□ 1.74
CLIP2-208ENST00000491075 INPP5BP32019 993 aa25.89■■□□□ 1.74
CLIP2-208ENST00000491075 MIGA2Q7L4E1 593 aa25.89■■□□□ 1.74
CLIP2-208ENST00000491075 FAM151AQ8WW52 585 aa25.89■■□□□ 1.74
CLIP2-208ENST00000491075 PTPRCP08575 1304 aa25.88■■□□□ 1.73
CLIP2-208ENST00000491075 SRRDQ9UH36 339 aa25.88■■□□□ 1.73
CLIP2-208ENST00000491075 CPA4Q9UI42 421 aa25.88■■□□□ 1.73
CLIP2-208ENST00000491075 KCNH4Q9UQ05 1017 aa25.88■■□□□ 1.73
CLIP2-208ENST00000491075 ADGRA2Q96PE1 1338 aa25.88■■□□□ 1.73
CLIP2-208ENST00000491075 MGAMO43451 1857 aa25.87■■□□□ 1.73
CLIP2-208ENST00000491075 DOCK2Q92608 1830 aa25.87■■□□□ 1.73
CLIP2-208ENST00000491075 H0YGN5 161 aa25.87■■□□□ 1.73
CLIP2-208ENST00000491075 PDHXO00330 501 aa25.87■■□□□ 1.73
CLIP2-208ENST00000491075 SLC5A1P13866 664 aa25.87■■□□□ 1.73
CLIP2-208ENST00000491075 HOXD10P28358 340 aa25.87■■□□□ 1.73
CLIP2-208ENST00000491075 PSMC4P43686 418 aa25.87■■□□□ 1.73
CLIP2-208ENST00000491075 ZNF112Q9UJU3 913 aa25.87■■□□□ 1.73
CLIP2-208ENST00000491075 MRPL50Q8N5N7 158 aaKnown RBP25.86■■□□□ 1.73
CLIP2-208ENST00000491075 LPIN2Q92539 896 aa25.86■■□□□ 1.73
CLIP2-208ENST00000491075 TRIM47Q96LD4 638 aa25.86■■□□□ 1.73
CLIP2-208ENST00000491075 TRIOBPQ9H2D6 2365 aa25.85■■□□□ 1.73
CLIP2-208ENST00000491075 CTGFP29279 349 aa25.85■■□□□ 1.73
CLIP2-208ENST00000491075 ZEB1P37275 1124 aaPredicted RBP25.85■■□□□ 1.73
CLIP2-208ENST00000491075 NOL9Q5SY16 702 aaKnown RBP25.85■■□□□ 1.73
CLIP2-208ENST00000491075 NKX2-3Q8TAU0 364 aa25.85■■□□□ 1.73
CLIP2-208ENST00000491075 SHISA4Q96DD7 197 aa25.85■■□□□ 1.73
CLIP2-208ENST00000491075 DAGLAQ9Y4D2 1042 aa25.85■■□□□ 1.73
CLIP2-208ENST00000491075 EYA2O00167 538 aa25.84■■□□□ 1.73
CLIP2-208ENST00000491075 OSBPP22059 807 aa25.84■■□□□ 1.73
CLIP2-208ENST00000491075 TCP10Q12799 353 aa25.84■■□□□ 1.73
CLIP2-208ENST00000491075 MTFR1Q15390 333 aa25.84■■□□□ 1.73
CLIP2-208ENST00000491075 CDC42EP5Q6NZY7 148 aa25.84■■□□□ 1.73
CLIP2-208ENST00000491075 RAET1EQ8TD07 263 aa25.84■■□□□ 1.73
CLIP2-208ENST00000491075 USP44Q9H0E7 712 aa25.84■■□□□ 1.73
CLIP2-208ENST00000491075 ECM2O94769 699 aaPredicted RBP25.83■■□□□ 1.73
CLIP2-208ENST00000491075 FMNL1O95466 1100 aaPredicted RBP25.83■■□□□ 1.73
CLIP2-208ENST00000491075 GRK4P32298 578 aa25.83■■□□□ 1.73
CLIP2-208ENST00000491075 PARK7Q99497 189 aaKnown RBP25.83■■□□□ 1.73
CLIP2-208ENST00000491075 MYPNQ86TC9 1320 aa25.83■■□□□ 1.73
CLIP2-208ENST00000491075 MOGSQ13724 837 aa25.82■■□□□ 1.72
CLIP2-208ENST00000491075 DIXDC1Q155Q3 683 aa25.82■■□□□ 1.72
CLIP2-208ENST00000491075 FAM9BQ8IZU0 186 aa25.82■■□□□ 1.72
CLIP2-208ENST00000491075 ZNF521Q96K83 1311 aa25.82■■□□□ 1.72
CLIP2-208ENST00000491075 MYH2Q9UKX2 1941 aa25.81■■□□□ 1.72
CLIP2-208ENST00000491075 RFX5P48382 616 aaPredicted RBP25.81■■□□□ 1.72
CLIP2-208ENST00000491075 NFIAQ12857 509 aa25.81■■□□□ 1.72
CLIP2-208ENST00000491075 PRDX5P30044 214 aa25.8■■□□□ 1.72
CLIP2-208ENST00000491075 FAM198AQ9UFP1 575 aa25.8■■□□□ 1.72
CLIP2-208ENST00000491075 PTPRFP10586 1907 aa25.79■■□□□ 1.72
CLIP2-208ENST00000491075 CXCL11O14625 94 aa25.79■■□□□ 1.72
CLIP2-208ENST00000491075 LDHBP07195 334 aaKnown RBP25.79■■□□□ 1.72
CLIP2-208ENST00000491075 GJB1P08034 283 aa25.79■■□□□ 1.72
CLIP2-208ENST00000491075 GJA8P48165 433 aa25.79■■□□□ 1.72
CLIP2-208ENST00000491075 GNL3LQ9NVN8 582 aaKnown RBP25.79■■□□□ 1.72
CLIP2-208ENST00000491075 RANBP2P49792 3224 aaKnown RBP25.78■■□□□ 1.72
CLIP2-208ENST00000491075 BCRP11274 1271 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 CCL5P13501 91 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 FCGRTP55899 365 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 UBXN2AP68543 259 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 CHRDL2Q6WN34 429 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 ATG9AQ7Z3C6 839 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 DPF3Q92784 378 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 USP40Q9NVE5 1235 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 FBXO3Q9UK99 471 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 SALL1Q9NSC2 1324 aa25.78■■□□□ 1.72
CLIP2-208ENST00000491075 DOCK1Q14185 1865 aa25.77■■□□□ 1.72
CLIP2-208ENST00000491075 ATP2B3Q16720 1220 aa25.77■■□□□ 1.72
CLIP2-208ENST00000491075 UBE2Q1Q7Z7E8 422 aa25.77■■□□□ 1.72
CLIP2-208ENST00000491075 HTATIP2Q9BUP3 242 aa25.77■■□□□ 1.72
CLIP2-208ENST00000491075 BIN2Q9UBW5 565 aaPredicted RBP25.77■■□□□ 1.72
CLIP2-208ENST00000491075 SZT2Q5T011 3432 aa25.76■■□□□ 1.71
CLIP2-208ENST00000491075 SEMA3EO15041 775 aa25.76■■□□□ 1.71
CLIP2-208ENST00000491075 PRKCZQ05513 592 aa25.76■■□□□ 1.71
CLIP2-208ENST00000491075 GPAT2Q6NUI2 795 aa25.76■■□□□ 1.71
CLIP2-208ENST00000491075 SLAIN1Q8ND83 568 aa25.76■■□□□ 1.71
CLIP2-208ENST00000491075 SSH1Q8WYL5 1049 aa25.76■■□□□ 1.71
CLIP2-208ENST00000491075 RNF208Q9H0X6 261 aa25.76■■□□□ 1.71
CLIP2-208ENST00000491075 ATRNL1Q5VV63 1379 aa25.76■■□□□ 1.71
CLIP2-208ENST00000491075 CIAO1O76071 339 aa25.75■■□□□ 1.71
CLIP2-208ENST00000491075 FASTKD5Q7L8L6 764 aaKnown RBP25.75■■□□□ 1.71
CLIP2-208ENST00000491075 SCYL3Q8IZE3 742 aa25.75■■□□□ 1.71
CLIP2-208ENST00000491075 DENND2AQ9ULE3 1009 aa25.75■■□□□ 1.71
CLIP2-208ENST00000491075 PHIPQ8WWQ0 1821 aa25.74■■□□□ 1.71
CLIP2-208ENST00000491075 A0A0G2JLL6 359 aaPredicted RBP25.74■■□□□ 1.71
CLIP2-208ENST00000491075 CYP2C8P10632 490 aa25.74■■□□□ 1.71
CLIP2-208ENST00000491075 PRRT2Q7Z6L0 340 aaPredicted RBP25.74■■□□□ 1.71
CLIP2-208ENST00000491075 PICK1Q9NRD5 415 aa25.74■■□□□ 1.71
CLIP2-208ENST00000491075 CEP126Q9P2H0 1117 aa25.74■■□□□ 1.71
CLIP2-208ENST00000491075 PHF20L1A8MW92 1017 aa25.73■■□□□ 1.71
CLIP2-208ENST00000491075 ENTPD3O75355 529 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms