RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 ERC1Q8IUD2 1116 aa18.71■□□□□ 0.59
COL27A1-206ENST00000490831 SIRT2Q8IXJ6 389 aa18.71■□□□□ 0.59
COL27A1-206ENST00000490831 DBNDD2Q9BQY9 259 aa18.71■□□□□ 0.59
COL27A1-206ENST00000490831 IFFO2Q5TF58 517 aa18.7■□□□□ 0.58
COL27A1-206ENST00000490831 PI16Q6UXB8 463 aa18.7■□□□□ 0.58
COL27A1-206ENST00000490831 SLF2Q8IX21 1173 aa18.7■□□□□ 0.58
COL27A1-206ENST00000490831 EAF2Q96CJ1 260 aaPredicted RBP18.7■□□□□ 0.58
COL27A1-206ENST00000490831 ABCF2Q9UG63 623 aa18.7■□□□□ 0.58
COL27A1-206ENST00000490831 DBNLQ9UJU6 430 aaKnown RBP18.7■□□□□ 0.58
COL27A1-206ENST00000490831 MYH2Q9UKX2 1941 aa18.7■□□□□ 0.58
COL27A1-206ENST00000490831 HMMRO75330 724 aa18.69■□□□□ 0.58
COL27A1-206ENST00000490831 CCDC158Q5M9N0 1113 aa18.69■□□□□ 0.58
COL27A1-206ENST00000490831 SPRYD7Q5W111 196 aa18.69■□□□□ 0.58
COL27A1-206ENST00000490831 ERICH6Q7L0X2 663 aa18.69■□□□□ 0.58
COL27A1-206ENST00000490831 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
COL27A1-206ENST00000490831 ZNF384Q8TF68 577 aa18.69■□□□□ 0.58
COL27A1-206ENST00000490831 FAM151AQ8WW52 585 aa18.69■□□□□ 0.58
COL27A1-206ENST00000490831 EXOC6BQ9Y2D4 811 aa18.69■□□□□ 0.58
COL27A1-206ENST00000490831 RFX7Q2KHR2 1363 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 AKAP11Q9UKA4 1901 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 LAMB1P07942 1786 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 IGSF3O75054 1194 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 TM4SF4P48230 202 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 MECOMQ03112 1051 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 TTC39AQ5SRH9 613 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 ANKRD13AQ8IZ07 590 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 NSUN4Q96CB9 384 aaKnown RBP18.68■□□□□ 0.58
COL27A1-206ENST00000490831 HOOK2Q96ED9 719 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 SLC10A4Q96EP9 437 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 CLMNQ96JQ2 1002 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 IDI2Q9BXS1 227 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 RNF186Q9NXI6 227 aa18.68■□□□□ 0.58
COL27A1-206ENST00000490831 ZBTB48P10074 688 aaPredicted RBP18.67■□□□□ 0.58
COL27A1-206ENST00000490831 NFIAQ12857 509 aa18.67■□□□□ 0.58
COL27A1-206ENST00000490831 TNS4Q8IZW8 715 aa18.67■□□□□ 0.58
COL27A1-206ENST00000490831 USP40Q9NVE5 1235 aa18.67■□□□□ 0.58
COL27A1-206ENST00000490831 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
COL27A1-206ENST00000490831 FAM198AQ9UFP1 575 aa18.67■□□□□ 0.58
COL27A1-206ENST00000490831 TSKSQ9UJT2 592 aa18.67■□□□□ 0.58
COL27A1-206ENST00000490831 OTOFQ9HC10 1997 aa18.67■□□□□ 0.58
COL27A1-206ENST00000490831 MROH7-TTC4A0A0A0MT08 1334 aa18.67■□□□□ 0.58
COL27A1-206ENST00000490831 GPR75-ASB3A0A0A6YYF3 556 aa18.66■□□□□ 0.58
COL27A1-206ENST00000490831 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.66■□□□□ 0.58
COL27A1-206ENST00000490831 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
COL27A1-206ENST00000490831 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.66■□□□□ 0.58
COL27A1-206ENST00000490831 RHPN1Q8TCX5 695 aa18.66■□□□□ 0.58
COL27A1-206ENST00000490831 WNK4Q96J92 1243 aa18.66■□□□□ 0.58
COL27A1-206ENST00000490831 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
COL27A1-206ENST00000490831 ENTPD3O75355 529 aa18.65■□□□□ 0.58
COL27A1-206ENST00000490831 GSTO1P78417 241 aa18.65■□□□□ 0.58
COL27A1-206ENST00000490831 MAP3K9P80192 1104 aa18.65■□□□□ 0.58
COL27A1-206ENST00000490831 KIF1BPQ96EK5 621 aa18.65■□□□□ 0.58
COL27A1-206ENST00000490831 RAB11FIP3O75154 756 aa18.64■□□□□ 0.57
COL27A1-206ENST00000490831 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
COL27A1-206ENST00000490831 TRPA1O75762 1119 aa18.64■□□□□ 0.57
COL27A1-206ENST00000490831 MAP4K4O95819 1239 aaPredicted RBP18.64■□□□□ 0.57
COL27A1-206ENST00000490831 CYP2E1P05181 493 aaPredicted RBP18.64■□□□□ 0.57
COL27A1-206ENST00000490831 LDHCP07864 332 aa18.64■□□□□ 0.57
COL27A1-206ENST00000490831 BTDP43251 543 aa18.64■□□□□ 0.57
COL27A1-206ENST00000490831 RHBDL3P58872 404 aa18.64■□□□□ 0.57
COL27A1-206ENST00000490831 SREBF2Q12772 1141 aa18.64■□□□□ 0.57
COL27A1-206ENST00000490831 MANSC4A6NHS7 340 aaPredicted RBP18.63■□□□□ 0.57
COL27A1-206ENST00000490831 WDHD1O75717 1129 aaPredicted RBP18.63■□□□□ 0.57
COL27A1-206ENST00000490831 GJA5P36382 358 aa18.63■□□□□ 0.57
COL27A1-206ENST00000490831 INHBEP58166 350 aa18.63■□□□□ 0.57
COL27A1-206ENST00000490831 MKRN3Q13064 507 aaKnown RBP18.63■□□□□ 0.57
COL27A1-206ENST00000490831 DCAF15Q66K64 600 aa18.63■□□□□ 0.57
COL27A1-206ENST00000490831 AACSQ86V21 672 aa18.63■□□□□ 0.57
COL27A1-206ENST00000490831 CFHR5Q9BXR6 569 aa18.63■□□□□ 0.57
COL27A1-206ENST00000490831 SNRKQ9NRH2 765 aa18.63■□□□□ 0.57
COL27A1-206ENST00000490831 RAI14Q9P0K7 980 aa18.63■□□□□ 0.57
COL27A1-206ENST00000490831 LRP2BPQ9P2M1 347 aa18.63■□□□□ 0.57
COL27A1-206ENST00000490831 ZAP70P43403 619 aa18.62■□□□□ 0.57
COL27A1-206ENST00000490831 RGS3P49796 1198 aa18.62■□□□□ 0.57
COL27A1-206ENST00000490831 TCP10Q12799 353 aa18.62■□□□□ 0.57
COL27A1-206ENST00000490831 VGLL4Q14135 290 aa18.62■□□□□ 0.57
COL27A1-206ENST00000490831 IL1RAPL2Q9NP60 686 aa18.62■□□□□ 0.57
COL27A1-206ENST00000490831 ZNF112Q9UJU3 913 aa18.62■□□□□ 0.57
COL27A1-206ENST00000490831 ATRNL1Q5VV63 1379 aa18.62■□□□□ 0.57
COL27A1-206ENST00000490831 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
COL27A1-206ENST00000490831 ZFPM1Q8IX07 1006 aa18.61■□□□□ 0.57
COL27A1-206ENST00000490831 CLASRPQ8N2M8 674 aaKnown RBP18.61■□□□□ 0.57
COL27A1-206ENST00000490831 ZNF341Q9BYN7 854 aa18.61■□□□□ 0.57
COL27A1-206ENST00000490831 ELP3Q9H9T3 547 aa18.61■□□□□ 0.57
COL27A1-206ENST00000490831 DDX4Q9NQI0 724 aaKnown RBP18.61■□□□□ 0.57
COL27A1-206ENST00000490831 CSADQ9Y600 493 aa18.61■□□□□ 0.57
COL27A1-206ENST00000490831 TESPA1A2RU30 521 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-206ENST00000490831 RRP1P56182 461 aaKnown RBP18.6■□□□□ 0.57
COL27A1-206ENST00000490831 MAP3K10Q02779 954 aa18.6■□□□□ 0.57
COL27A1-206ENST00000490831 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
COL27A1-206ENST00000490831 OPTNQ96CV9 577 aa18.6■□□□□ 0.57
COL27A1-206ENST00000490831 WRNIP1Q96S55 665 aa18.6■□□□□ 0.57
COL27A1-206ENST00000490831 PIH1D3Q9NQM4 214 aaKnown RBP18.6■□□□□ 0.57
COL27A1-206ENST00000490831 SNCAIPQ9Y6H5 919 aa18.6■□□□□ 0.57
COL27A1-206ENST00000490831 CASP8AP2Q9UKL3 1982 aa18.6■□□□□ 0.57
COL27A1-206ENST00000490831 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
COL27A1-206ENST00000490831 SPDYE5A6NIY4 337 aa18.59■□□□□ 0.57
COL27A1-206ENST00000490831 ALDH1A1P00352 501 aa18.59■□□□□ 0.57
COL27A1-206ENST00000490831 PPP4CP60510 307 aa18.59■□□□□ 0.57
COL27A1-206ENST00000490831 NAA16Q6N069 864 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms