RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 ZNF609O15014 1411 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 COL15A1P39059 1388 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 CABP4P57796 275 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 PHLPP1O60346 1717 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 GOLGA8BA8MQT2 603 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 E7EWF7 191 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 PFKFB2O60825 505 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 HMGB1P09429 215 aaKnown RBP11.68□□□□□ -0.54
BRD9-209ENST00000490814 GSDMDP57764 484 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 RALYLQ86SE5 291 aaKnown RBP11.68□□□□□ -0.54
BRD9-209ENST00000490814 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
BRD9-209ENST00000490814 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.68□□□□□ -0.544e-8■■■■■ 42.2
BRD9-209ENST00000490814 SNRPA1P09661 255 aaKnown RBP11.68□□□□□ -0.54
BRD9-209ENST00000490814 RXRAP19793 462 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 MCTP2Q6DN12 878 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 HAUS7Q99871 368 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 ORC3Q9UBD5 711 aaPredicted RBP11.68□□□□□ -0.54
BRD9-209ENST00000490814 PCDHA7Q9UN72 937 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 KLF18A0A0U1RQI7 1052 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 NDUFA8P51970 172 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 DPCR1Q3MIW9 517 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 EPC1Q9H2F5 836 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 SLC52A2Q9HAB3 445 aa11.68□□□□□ -0.54
BRD9-209ENST00000490814 GOLGB1Q14789 3259 aaKnown RBP11.67□□□□□ -0.54
BRD9-209ENST00000490814 TTC36A6NLP5 189 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 CTDNEP1O95476 244 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
BRD9-209ENST00000490814 PTF1AQ7RTS3 328 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 PPP1R13BQ96KQ4 1090 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 RCOR1Q9UKL0 485 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 CLIC4Q9Y696 253 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 SLC3A2P08195 630 aaKnown RBP11.67□□□□□ -0.54
BRD9-209ENST00000490814 HSPD1P10809 573 aaKnown RBP11.67□□□□□ -0.54
BRD9-209ENST00000490814 MAGEA9P43362 315 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 LRRC24Q50LG9 513 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 NAA16Q6N069 864 aaPredicted RBP11.67□□□□□ -0.54
BRD9-209ENST00000490814 CARD6Q9BX69 1037 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 FHOD1Q9Y613 1164 aa11.67□□□□□ -0.54
BRD9-209ENST00000490814 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
BRD9-209ENST00000490814 PLA2G4AP47712 749 aa11.66□□□□□ -0.54
BRD9-209ENST00000490814 SWT1Q5T5J6 900 aaKnown RBP11.66□□□□□ -0.54
BRD9-209ENST00000490814 SARM1Q6SZW1 724 aa11.66□□□□□ -0.54
BRD9-209ENST00000490814 XPO4Q9C0E2 1151 aaKnown RBP11.66□□□□□ -0.54
BRD9-209ENST00000490814 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
BRD9-209ENST00000490814 E4F1Q66K89 784 aaPredicted RBP11.66□□□□□ -0.54
BRD9-209ENST00000490814 RBM43Q6ZSC3 357 aaKnown RBP11.66□□□□□ -0.54
BRD9-209ENST00000490814 RGS17Q9UGC6 210 aaPredicted RBP11.66□□□□□ -0.54
BRD9-209ENST00000490814 SERPINC1P01008 464 aa11.66□□□□□ -0.54
BRD9-209ENST00000490814 ST5P78524 1137 aa11.66□□□□□ -0.54
BRD9-209ENST00000490814 TTC39AQ5SRH9 613 aa11.66□□□□□ -0.54
BRD9-209ENST00000490814 KRT27Q7Z3Y8 459 aa11.66□□□□□ -0.54
BRD9-209ENST00000490814 DHX40Q8IX18 779 aaKnown RBP11.66□□□□□ -0.54
BRD9-209ENST00000490814 LLPHQ9BRT6 129 aaKnown RBP11.66□□□□□ -0.54
BRD9-209ENST00000490814 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
BRD9-209ENST00000490814 SF3B2Q13435 895 aaKnown RBP11.65□□□□□ -0.54
BRD9-209ENST00000490814 SMARCE1Q969G3 411 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 CEP126Q9P2H0 1117 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 PLEKHG2Q9H7P9 1386 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 SPTLC2O15270 562 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 H2AFXP16104 143 aaPredicted RBP11.65□□□□□ -0.54
BRD9-209ENST00000490814 SMIM5Q71RC9 77 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 NBPF5PQ86XG9 351 aaPredicted RBP11.65□□□□□ -0.54
BRD9-209ENST00000490814 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
BRD9-209ENST00000490814 PDILTQ8N807 584 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 FBXO18Q8NFZ0 1043 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 GOLGA5Q8TBA6 731 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.54
BRD9-209ENST00000490814 SPATA31A1Q5TZJ5 1347 aa11.65□□□□□ -0.54
BRD9-209ENST00000490814 CYP27B1O15528 508 aa11.65□□□□□ -0.55
BRD9-209ENST00000490814 PRC1O43663 620 aa11.65□□□□□ -0.55
BRD9-209ENST00000490814 OAS2P29728 719 aaKnown RBP11.65□□□□□ -0.55
BRD9-209ENST00000490814 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.55
BRD9-209ENST00000490814 LMAN1P49257 510 aa11.65□□□□□ -0.55
BRD9-209ENST00000490814 IMMTQ16891 758 aaKnown RBP11.65□□□□□ -0.55
BRD9-209ENST00000490814 CFAP100Q494V2 611 aa11.65□□□□□ -0.55
BRD9-209ENST00000490814 SUGP1Q8IWZ8 645 aaKnown RBP11.65□□□□□ -0.55
BRD9-209ENST00000490814 GOLGA8FQ08AF8 430 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 GOLGA8DPQ0D2H9 430 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 VPS72Q15906 364 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 SMARCC2Q8TAQ2 1214 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 TOPAZ1Q8N9V7 1692 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 MAST3O60307 1309 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 LRP6O75581 1613 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 RNF113AO15541 343 aaKnown RBP11.64□□□□□ -0.55
BRD9-209ENST00000490814 ARID4AP29374 1257 aaPredicted RBP11.64□□□□□ -0.55
BRD9-209ENST00000490814 RFX5P48382 616 aaPredicted RBP11.64□□□□□ -0.55
BRD9-209ENST00000490814 EVCP57679 992 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 TRDNQ13061 729 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 NFXL1Q6ZNB6 911 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 ALDH8A1Q9H2A2 487 aaPredicted RBP11.64□□□□□ -0.55
BRD9-209ENST00000490814 ZSWIM4Q9H7M6 989 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 UTYO14607 1347 aa11.64□□□□□ -0.55
BRD9-209ENST00000490814 CARMIL3Q8ND23 1372 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms