RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 ZAP70P43403 619 aa18.82■□□□□ 0.6
VPS26A-207ENST00000490696 TNNI2P48788 182 aa18.82■□□□□ 0.6
VPS26A-207ENST00000490696 SUPT20HL1Q3ZLR7 823 aa18.82■□□□□ 0.6
VPS26A-207ENST00000490696 FAM83AQ86UY5 434 aa18.82■□□□□ 0.6
VPS26A-207ENST00000490696 CDAN1Q8IWY9 1227 aa18.82■□□□□ 0.6
VPS26A-207ENST00000490696 SLF2Q8IX21 1173 aa18.82■□□□□ 0.6
VPS26A-207ENST00000490696 LRRCC1Q9C099 1032 aa18.82■□□□□ 0.6
VPS26A-207ENST00000490696 TMEM39BQ9GZU3 492 aa18.82■□□□□ 0.6
VPS26A-207ENST00000490696 MROH7-TTC4A0A0A0MT08 1334 aa18.81■□□□□ 0.6
VPS26A-207ENST00000490696 UBE2Q2LH0YL09 131 aa18.81■□□□□ 0.6
VPS26A-207ENST00000490696 IFIT2P09913 472 aaKnown RBP18.81■□□□□ 0.6
VPS26A-207ENST00000490696 GRM1Q13255 1194 aa18.81■□□□□ 0.6
VPS26A-207ENST00000490696 TTLL12Q14166 644 aaPredicted RBP18.81■□□□□ 0.6
VPS26A-207ENST00000490696 USP40Q9NVE5 1235 aa18.81■□□□□ 0.6
VPS26A-207ENST00000490696 RAI14Q9P0K7 980 aa18.81■□□□□ 0.6
VPS26A-207ENST00000490696 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
VPS26A-207ENST00000490696 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
VPS26A-207ENST00000490696 FAM155AB1AL88 458 aaPredicted RBP18.8■□□□□ 0.6
VPS26A-207ENST00000490696 AOC2O75106 756 aa18.8■□□□□ 0.6
VPS26A-207ENST00000490696 ZNF157P51786 506 aaPredicted RBP18.8■□□□□ 0.6
VPS26A-207ENST00000490696 PRKG1Q13976 671 aa18.8■□□□□ 0.6
VPS26A-207ENST00000490696 MAP3K11Q16584 847 aa18.8■□□□□ 0.6
VPS26A-207ENST00000490696 ARMC9Q7Z3E5 817 aa18.8■□□□□ 0.6
VPS26A-207ENST00000490696 PIH1D3Q9NQM4 214 aaKnown RBP18.8■□□□□ 0.6
VPS26A-207ENST00000490696 FZD1Q9UP38 647 aa18.8■□□□□ 0.6
VPS26A-207ENST00000490696 GPR75-ASB3A0A0A6YYF3 556 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 SMARCA5O60264 1052 aaPredicted RBP18.79■□□□□ 0.6
VPS26A-207ENST00000490696 IGSF3O75054 1194 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 MAP2K2P36507 400 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 BTDP43251 543 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 GSTO1P78417 241 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 NFIAQ12857 509 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 AAMPQ13685 434 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 LDLRAD1Q5T700 205 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.79■□□□□ 0.6
VPS26A-207ENST00000490696 CCDC102AQ96A19 550 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 BCL11AQ9H165 835 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 ANGEL1Q9UNK9 670 aaKnown RBP18.79■□□□□ 0.6
VPS26A-207ENST00000490696 NDUFB9Q9Y6M9 179 aa18.79■□□□□ 0.6
VPS26A-207ENST00000490696 PPP1R12BO60237 982 aaPredicted RBP18.78■□□□□ 0.6
VPS26A-207ENST00000490696 SLC34A2O95436 690 aa18.78■□□□□ 0.6
VPS26A-207ENST00000490696 LDHCP07864 332 aa18.78■□□□□ 0.6
VPS26A-207ENST00000490696 SLC10A3P09131 477 aa18.78■□□□□ 0.6
VPS26A-207ENST00000490696 NOGQ13253 232 aa18.78■□□□□ 0.6
VPS26A-207ENST00000490696 RASAL3Q86YV0 1011 aa18.78■□□□□ 0.6
VPS26A-207ENST00000490696 ZIC5Q96T25 663 aa18.78■□□□□ 0.6
VPS26A-207ENST00000490696 FAM198AQ9UFP1 575 aa18.78■□□□□ 0.6
VPS26A-207ENST00000490696 RFX7Q2KHR2 1363 aa18.78■□□□□ 0.6
VPS26A-207ENST00000490696 RPAP1Q9BWH6 1393 aaPredicted RBP18.78■□□□□ 0.6
VPS26A-207ENST00000490696 MYO5AQ9Y4I1 1855 aaKnown RBP18.77■□□□□ 0.6
VPS26A-207ENST00000490696 USP2O75604 605 aaPredicted RBP18.77■□□□□ 0.6
VPS26A-207ENST00000490696 RHBDL3P58872 404 aa18.77■□□□□ 0.6
VPS26A-207ENST00000490696 FAM151AQ8WW52 585 aa18.77■□□□□ 0.6
VPS26A-207ENST00000490696 IDI2Q9BXS1 227 aa18.77■□□□□ 0.6
VPS26A-207ENST00000490696 ANTXR1Q9H6X2 564 aa18.77■□□□□ 0.6
VPS26A-207ENST00000490696 WBP1LQ9NX94 342 aa18.77■□□□□ 0.6
VPS26A-207ENST00000490696 MAST2Q6P0Q8 1798 aa18.76■□□□□ 0.59
VPS26A-207ENST00000490696 WDHD1O75717 1129 aaPredicted RBP18.76■□□□□ 0.59
VPS26A-207ENST00000490696 TCP10Q12799 353 aa18.76■□□□□ 0.59
VPS26A-207ENST00000490696 NAA16Q6N069 864 aaPredicted RBP18.76■□□□□ 0.59
VPS26A-207ENST00000490696 EXOC6Q8TAG9 804 aa18.76■□□□□ 0.59
VPS26A-207ENST00000490696 ATP5JP18859 108 aa18.75■□□□□ 0.59
VPS26A-207ENST00000490696 IREB2P48200 963 aaKnown RBP18.75■□□□□ 0.59
VPS26A-207ENST00000490696 MAP2K1Q02750 393 aaPredicted RBP18.75■□□□□ 0.59
VPS26A-207ENST00000490696 HDAC1Q13547 482 aaPredicted RBP18.75■□□□□ 0.59
VPS26A-207ENST00000490696 ADGRA1Q86SQ6 560 aa18.75■□□□□ 0.59
VPS26A-207ENST00000490696 ZFPM1Q8IX07 1006 aa18.75■□□□□ 0.59
VPS26A-207ENST00000490696 UNCXA6NJT0 531 aa18.74■□□□□ 0.59
VPS26A-207ENST00000490696 ENTPD3O75355 529 aa18.74■□□□□ 0.59
VPS26A-207ENST00000490696 IDH1O75874 414 aaKnown RBP18.74■□□□□ 0.59
VPS26A-207ENST00000490696 MAP4K4O95819 1239 aaPredicted RBP18.74■□□□□ 0.59
VPS26A-207ENST00000490696 RGS3P49796 1198 aa18.74■□□□□ 0.59
VPS26A-207ENST00000490696 DDX4Q9NQI0 724 aaKnown RBP18.74■□□□□ 0.59
VPS26A-207ENST00000490696 DOCK2Q92608 1830 aa18.73■□□□□ 0.59
VPS26A-207ENST00000490696 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
VPS26A-207ENST00000490696 PPP4CP60510 307 aa18.73■□□□□ 0.59
VPS26A-207ENST00000490696 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
VPS26A-207ENST00000490696 CLMNQ96JQ2 1002 aa18.73■□□□□ 0.59
VPS26A-207ENST00000490696 BOLA2Q9H3K6 86 aa18.73■□□□□ 0.59
VPS26A-207ENST00000490696 KIF23Q02241 960 aaPredicted RBP18.72■□□□□ 0.59
VPS26A-207ENST00000490696 MAP3K12Q12852 859 aa18.72■□□□□ 0.59
VPS26A-207ENST00000490696 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.72■□□□□ 0.59
VPS26A-207ENST00000490696 HOOK2Q96ED9 719 aa18.72■□□□□ 0.59
VPS26A-207ENST00000490696 DNAJC2Q99543 621 aaKnown RBP18.72■□□□□ 0.59
VPS26A-207ENST00000490696 HAUS7Q99871 368 aa18.72■□□□□ 0.59
VPS26A-207ENST00000490696 AATFQ9NY61 560 aaKnown RBP eCLIP18.72■□□□□ 0.59
VPS26A-207ENST00000490696 GOLIM4O00461 696 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 FOXN1O15353 648 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 BAG3O95817 575 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 CYP7A1P22680 504 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
VPS26A-207ENST00000490696 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.71■□□□□ 0.59
VPS26A-207ENST00000490696 SH3BP5LQ7L8J4 393 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 ANKRD13AQ8IZ07 590 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 MAGEB6Q8N7X4 407 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 SH3RF3Q8TEJ3 882 aaPredicted RBP18.71■□□□□ 0.59
VPS26A-207ENST00000490696 SLC10A4Q96EP9 437 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
VPS26A-207ENST00000490696 ECHDC1Q9NTX5 307 aa18.71■□□□□ 0.59
VPS26A-207ENST00000490696 OTOFQ9HC10 1997 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms