RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
CSTF1-205ENST00000490539 ZNF211Q13398 564 aaPredicted RBP6.67□□□□□ -1.34
CSTF1-205ENST00000490539 TRAPPC3LQ5T215 181 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 TRIM11Q96F44 468 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 ELP3Q9H9T3 547 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 STARD13Q9Y3M8 1113 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 PIK3C2BO00750 1634 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 LRP6O75581 1613 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 RPGRIP1LQ68CZ1 1315 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 E9PCH4 1651 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 POLR1AO95602 1720 aaPredicted RBP6.67□□□□□ -1.34
CSTF1-205ENST00000490539 UBR1Q8IWV7 1749 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 RIMS2Q9UQ26 1411 aa6.67□□□□□ -1.34
CSTF1-205ENST00000490539 MED14O60244 1454 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 SYNMO15061 1565 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 FAM177BA6PVY3 158 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 PATL2C9JE40 543 aaKnown RBP6.66□□□□□ -1.34
CSTF1-205ENST00000490539 H3BRB1 525 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 DYRK3O43781 588 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 RAC1P63000 192 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 C20orf204Q6ZNR8 217 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 HFE2Q6ZVN8 426 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 OR13H1Q8NG92 308 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 NSUN5Q96P11 429 aaKnown RBP6.66□□□□□ -1.34
CSTF1-205ENST00000490539 TUT1Q9H6E5 874 aaKnown RBP6.66□□□□□ -1.34
CSTF1-205ENST00000490539 BRPF3Q9ULD4 1205 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 POLIQ9UNA4 740 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 SPHKAPQ2M3C7 1700 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 TRPM2O94759 1503 aa6.66□□□□□ -1.34
CSTF1-205ENST00000490539 ZBTB42B2RXF5 422 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 NDUFB5O43674 189 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 APBA3O96018 575 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 HOXD8P13378 290 aaPredicted RBP6.65□□□□□ -1.34
CSTF1-205ENST00000490539 LTKP29376 864 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 PERM1Q5SV97 790 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 XKR5Q6UX68 686 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 NCAPG2Q86XI2 1143 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 CACTIN-AS1Q8N1I8 211 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 TTC9Q92623 222 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 SLC26A8Q96RN1 970 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 SMG9Q9H0W8 520 aaKnown RBP6.65□□□□□ -1.34
CSTF1-205ENST00000490539 TPSG1Q9NRR2 321 aa6.65□□□□□ -1.34
CSTF1-205ENST00000490539 PLEKHG1Q9ULL1 1385 aa6.65□□□□□ -1.35
CSTF1-205ENST00000490539 BCL9LQ86UU0 1499 aa6.65□□□□□ -1.35
CSTF1-205ENST00000490539 ARHGAP23Q9P227 1491 aa6.65□□□□□ -1.35
CSTF1-205ENST00000490539 IQGAP1P46940 1657 aa6.65□□□□□ -1.35
CSTF1-205ENST00000490539 NEFLP07196 543 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 CES1P23141 567 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 SERPINB4P48594 390 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 RGL3Q3MIN7 710 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 WFDC8Q8IUA0 241 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 PLD4Q96BZ4 506 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 NAGPAQ9UK23 515 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 TBX22Q9Y458 520 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 KIF1BO60333 1816 aa6.64□□□□□ -1.35
CSTF1-205ENST00000490539 TMEM131LA2VDJ0 1609 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 J3QW42 95 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 SMNDC1O75940 238 aaKnown RBP eCLIP6.63□□□□□ -1.35
CSTF1-205ENST00000490539 NID1P14543 1247 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 KCNA6P17658 529 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 AFF1P51825 1210 aaKnown RBP6.63□□□□□ -1.35
CSTF1-205ENST00000490539 PDE3BQ13370 1112 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 C8orf86Q6ZUL3 223 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 DCAF11Q8TEB1 546 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 NEURL4Q96JN8 1562 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 LPIN3Q9BQK8 851 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 ANKRD30BQ9BXX2 1392 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 JCADQ9P266 1359 aa6.63□□□□□ -1.35
CSTF1-205ENST00000490539 PIK3R4Q99570 1358 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 DIEXFQ68CQ4 756 aaKnown RBP6.62□□□□□ -1.35
CSTF1-205ENST00000490539 MSL1Q68DK7 614 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 TMC1Q8TDI8 760 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 CITED4Q96RK1 184 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 KRTAP9-9Q9BYP9 154 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 MUC3BQ9H195 1237 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 GGNBP2Q9H3C7 697 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 TMEM63CQ9P1W3 806 aa6.62□□□□□ -1.35
CSTF1-205ENST00000490539 ZFYVE9O95405 1425 aa6.61□□□□□ -1.35
CSTF1-205ENST00000490539 FZD6O60353 706 aa6.61□□□□□ -1.35
CSTF1-205ENST00000490539 PHACTR2O75167 634 aa6.61□□□□□ -1.35
CSTF1-205ENST00000490539 CENPBP07199 599 aaPredicted RBP6.61□□□□□ -1.35
CSTF1-205ENST00000490539 KCNA1Q09470 495 aa6.61□□□□□ -1.35
CSTF1-205ENST00000490539 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
CSTF1-205ENST00000490539 GDF6Q6KF10 455 aaPredicted RBP6.61□□□□□ -1.35
CSTF1-205ENST00000490539 DTWD1Q8N5C7 304 aa6.61□□□□□ -1.35
CSTF1-205ENST00000490539 SNX29Q8TEQ0 813 aa6.61□□□□□ -1.35
CSTF1-205ENST00000490539 BIN2Q9UBW5 565 aaPredicted RBP6.61□□□□□ -1.35
CSTF1-205ENST00000490539 GNEQ9Y223 722 aaKnown RBP6.61□□□□□ -1.35
CSTF1-205ENST00000490539 STRCP1A6NGW2 1772 aa6.61□□□□□ -1.35
CSTF1-205ENST00000490539 KIF4AO95239 1232 aa6.6□□□□□ -1.35
CSTF1-205ENST00000490539 PDIA4P13667 645 aaKnown RBP6.6□□□□□ -1.35
CSTF1-205ENST00000490539 ATF3P18847 181 aa6.6□□□□□ -1.35
CSTF1-205ENST00000490539 MEX3CQ5U5Q3 659 aaKnown RBP6.6□□□□□ -1.35
CSTF1-205ENST00000490539 DMRTC2Q8IXT2 367 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-205ENST00000490539 TRAIPQ9BWF2 469 aa6.6□□□□□ -1.35
CSTF1-205ENST00000490539 CCDC87Q9NVE4 849 aa6.6□□□□□ -1.35
CSTF1-205ENST00000490539 CLTCL1P53675 1640 aa6.6□□□□□ -1.35
CSTF1-205ENST00000490539 DIP2AQ14689 1571 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms