RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 TRIM47Q96LD4 638 aa24.79■■□□□ 1.56
UPK3B-205ENST00000490360 FMNL1O95466 1100 aaPredicted RBP24.78■■□□□ 1.56
UPK3B-205ENST00000490360 GJB1P08034 283 aa24.78■■□□□ 1.56
UPK3B-205ENST00000490360 CAPN2P17655 700 aa24.78■■□□□ 1.56
UPK3B-205ENST00000490360 GJA8P48165 433 aa24.78■■□□□ 1.56
UPK3B-205ENST00000490360 RABL6Q3YEC7 729 aaPredicted RBP24.78■■□□□ 1.56
UPK3B-205ENST00000490360 CHRDL2Q6WN34 429 aa24.78■■□□□ 1.56
UPK3B-205ENST00000490360 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.78■■□□□ 1.56
UPK3B-205ENST00000490360 KAZALD1Q96I82 304 aa24.78■■□□□ 1.56
UPK3B-205ENST00000490360 KCNH4Q9UQ05 1017 aa24.78■■□□□ 1.56
UPK3B-205ENST00000490360 PDHXO00330 501 aa24.77■■□□□ 1.56
UPK3B-205ENST00000490360 FAM151AQ8WW52 585 aa24.77■■□□□ 1.56
UPK3B-205ENST00000490360 SHISA4Q96DD7 197 aa24.77■■□□□ 1.56
UPK3B-205ENST00000490360 CPA4Q9UI42 421 aa24.77■■□□□ 1.56
UPK3B-205ENST00000490360 ZNF112Q9UJU3 913 aa24.77■■□□□ 1.56
UPK3B-205ENST00000490360 NR2E3Q9Y5X4 410 aa24.77■■□□□ 1.56
UPK3B-205ENST00000490360 IFIT1P09914 478 aaKnown RBP24.76■■□□□ 1.55
UPK3B-205ENST00000490360 OSBPP22059 807 aa24.76■■□□□ 1.55
UPK3B-205ENST00000490360 UBXN2AP68543 259 aa24.76■■□□□ 1.55
UPK3B-205ENST00000490360 MTFR1Q15390 333 aa24.76■■□□□ 1.55
UPK3B-205ENST00000490360 CCDC184Q52MB2 194 aa24.76■■□□□ 1.55
UPK3B-205ENST00000490360 VGLL2Q8N8G2 317 aa24.76■■□□□ 1.55
UPK3B-205ENST00000490360 SZT2Q5T011 3432 aa24.76■■□□□ 1.55
UPK3B-205ENST00000490360 RANBP2P49792 3224 aaKnown RBP24.76■■□□□ 1.55
UPK3B-205ENST00000490360 NBPF7P0C2Y1 421 aaPredicted RBP24.75■■□□□ 1.55
UPK3B-205ENST00000490360 BCAMP50895 628 aa24.75■■□□□ 1.55
UPK3B-205ENST00000490360 MIGA2Q7L4E1 593 aa24.75■■□□□ 1.55
UPK3B-205ENST00000490360 WDR66Q8TBY9 1149 aa24.75■■□□□ 1.55
UPK3B-205ENST00000490360 PARK7Q99497 189 aaKnown RBP24.75■■□□□ 1.55
UPK3B-205ENST00000490360 BICC1Q9H694 974 aaKnown RBP24.75■■□□□ 1.55
UPK3B-205ENST00000490360 MYPNQ86TC9 1320 aa24.75■■□□□ 1.55
UPK3B-205ENST00000490360 ADGRA2Q96PE1 1338 aa24.75■■□□□ 1.55
UPK3B-205ENST00000490360 CCL5P13501 91 aa24.74■■□□□ 1.55
UPK3B-205ENST00000490360 INPP5BP32019 993 aa24.74■■□□□ 1.55
UPK3B-205ENST00000490360 PUM3Q15397 648 aaKnown RBP24.74■■□□□ 1.55
UPK3B-205ENST00000490360 LRRC24Q50LG9 513 aa24.74■■□□□ 1.55
UPK3B-205ENST00000490360 UBE2Q1Q7Z7E8 422 aa24.74■■□□□ 1.55
UPK3B-205ENST00000490360 RBM27Q9P2N5 1060 aaKnown RBP24.74■■□□□ 1.55
UPK3B-205ENST00000490360 BIN2Q9UBW5 565 aaPredicted RBP24.74■■□□□ 1.55
UPK3B-205ENST00000490360 AK9Q5TCS8 1911 aa24.74■■□□□ 1.55
UPK3B-205ENST00000490360 CTGFP29279 349 aa24.73■■□□□ 1.55
UPK3B-205ENST00000490360 FCGRTP55899 365 aa24.73■■□□□ 1.55
UPK3B-205ENST00000490360 NOL9Q5SY16 702 aaKnown RBP24.73■■□□□ 1.55
UPK3B-205ENST00000490360 SLAIN1Q8ND83 568 aa24.73■■□□□ 1.55
UPK3B-205ENST00000490360 RNF208Q9H0X6 261 aa24.73■■□□□ 1.55
UPK3B-205ENST00000490360 CXCL11O14625 94 aa24.72■■□□□ 1.55
UPK3B-205ENST00000490360 MYH13Q9UKX3 1938 aa24.71■■□□□ 1.55
UPK3B-205ENST00000490360 SALL2Q9Y467 1007 aaPredicted RBP24.71■■□□□ 1.55
UPK3B-205ENST00000490360 A0A1W2PPC1 479 aa24.7■■□□□ 1.54
UPK3B-205ENST00000490360 ZEB1P37275 1124 aaPredicted RBP24.7■■□□□ 1.54
UPK3B-205ENST00000490360 MGAMO43451 1857 aa24.69■■□□□ 1.54
UPK3B-205ENST00000490360 BCRP11274 1271 aa24.69■■□□□ 1.54
UPK3B-205ENST00000490360 FGFR2P21802 821 aa24.69■■□□□ 1.54
UPK3B-205ENST00000490360 MOGSQ13724 837 aa24.69■■□□□ 1.54
UPK3B-205ENST00000490360 FASTKD5Q7L8L6 764 aaKnown RBP24.69■■□□□ 1.54
UPK3B-205ENST00000490360 ANKRD44Q8N8A2 993 aa24.69■■□□□ 1.54
UPK3B-205ENST00000490360 PRO3102Q9H379 93 aa24.69■■□□□ 1.54
UPK3B-205ENST00000490360 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
UPK3B-205ENST00000490360 ECM2O94769 699 aaPredicted RBP24.68■■□□□ 1.54
UPK3B-205ENST00000490360 SLC5A1P13866 664 aa24.68■■□□□ 1.54
UPK3B-205ENST00000490360 U2AF1L4Q8WU68 220 aaKnown RBP24.68■■□□□ 1.54
UPK3B-205ENST00000490360 LPIN2Q92539 896 aa24.68■■□□□ 1.54
UPK3B-205ENST00000490360 FARP2O94887 1054 aaPredicted RBP24.67■■□□□ 1.54
UPK3B-205ENST00000490360 PRKCZQ05513 592 aa24.67■■□□□ 1.54
UPK3B-205ENST00000490360 TCP10Q12799 353 aa24.67■■□□□ 1.54
UPK3B-205ENST00000490360 CDC42EP5Q6NZY7 148 aa24.67■■□□□ 1.54
UPK3B-205ENST00000490360 SLC45A1Q9Y2W3 748 aa24.67■■□□□ 1.54
UPK3B-205ENST00000490360 DAGLAQ9Y4D2 1042 aa24.67■■□□□ 1.54
UPK3B-205ENST00000490360 SGPL1O95470 568 aa24.66■■□□□ 1.54
UPK3B-205ENST00000490360 SPINK5Q9NQ38 1064 aaPredicted RBP24.66■■□□□ 1.54
UPK3B-205ENST00000490360 ZBTB7BO15156 539 aaPredicted RBP24.65■■□□□ 1.54
UPK3B-205ENST00000490360 GPAT2Q6NUI2 795 aa24.65■■□□□ 1.54
UPK3B-205ENST00000490360 PXYLP1Q8TE99 480 aa24.65■■□□□ 1.54
UPK3B-205ENST00000490360 PICK1Q9NRD5 415 aa24.65■■□□□ 1.54
UPK3B-205ENST00000490360 GNL3LQ9NVN8 582 aaKnown RBP24.65■■□□□ 1.54
UPK3B-205ENST00000490360 PTPRCP08575 1304 aa24.64■■□□□ 1.54
UPK3B-205ENST00000490360 A0A0G2JLL6 359 aaPredicted RBP24.63■■□□□ 1.53
UPK3B-205ENST00000490360 EYA2O00167 538 aa24.63■■□□□ 1.53
UPK3B-205ENST00000490360 ADCY3O60266 1144 aa24.63■■□□□ 1.53
UPK3B-205ENST00000490360 LDHBP07195 334 aaKnown RBP24.63■■□□□ 1.53
UPK3B-205ENST00000490360 CYP2C8P10632 490 aa24.63■■□□□ 1.53
UPK3B-205ENST00000490360 NFIAQ12857 509 aa24.63■■□□□ 1.53
UPK3B-205ENST00000490360 IRF5Q13568 498 aa24.63■■□□□ 1.53
UPK3B-205ENST00000490360 PRRT2Q7Z6L0 340 aaPredicted RBP24.63■■□□□ 1.53
UPK3B-205ENST00000490360 KLHDC4Q8TBB5 520 aa24.63■■□□□ 1.53
UPK3B-205ENST00000490360 USP40Q9NVE5 1235 aa24.63■■□□□ 1.53
UPK3B-205ENST00000490360 FAM198AQ9UFP1 575 aa24.63■■□□□ 1.53
UPK3B-205ENST00000490360 EVI5O60447 810 aa24.62■■□□□ 1.53
UPK3B-205ENST00000490360 SCYL3Q8IZE3 742 aa24.62■■□□□ 1.53
UPK3B-205ENST00000490360 UNC93B1Q9H1C4 597 aa24.62■■□□□ 1.53
UPK3B-205ENST00000490360 FBXO3Q9UK99 471 aa24.62■■□□□ 1.53
UPK3B-205ENST00000490360 ZHX2Q9Y6X8 837 aa24.62■■□□□ 1.53
UPK3B-205ENST00000490360 SALL1Q9NSC2 1324 aa24.61■■□□□ 1.53
UPK3B-205ENST00000490360 SEMA3EO15041 775 aa24.61■■□□□ 1.53
UPK3B-205ENST00000490360 ENTPD3O75355 529 aa24.61■■□□□ 1.53
UPK3B-205ENST00000490360 DIXDC1Q155Q3 683 aa24.61■■□□□ 1.53
UPK3B-205ENST00000490360 GABRQQ9UN88 632 aa24.61■■□□□ 1.53
UPK3B-205ENST00000490360 PHF20L1A8MW92 1017 aa24.6■■□□□ 1.53
UPK3B-205ENST00000490360 ZBTB22O15209 634 aa24.6■■□□□ 1.53
UPK3B-205ENST00000490360 TFRCP02786 760 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms