RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CCDC158Q5M9N0 1113 aa21.46■■□□□ 1.03
SEC13-218ENST00000490283 DCAF15Q66K64 600 aa21.46■■□□□ 1.03
SEC13-218ENST00000490283 ERICH6Q7L0X2 663 aa21.46■■□□□ 1.03
SEC13-218ENST00000490283 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
SEC13-218ENST00000490283 SPATA5Q8NB90 893 aa21.46■■□□□ 1.03
SEC13-218ENST00000490283 WNK4Q96J92 1243 aa21.46■■□□□ 1.03
SEC13-218ENST00000490283 CSADQ9Y600 493 aa21.46■■□□□ 1.03
SEC13-218ENST00000490283 FPGT-TNNI3KV9GXZ4 949 aa21.46■■□□□ 1.03
SEC13-218ENST00000490283 ARID4AP29374 1257 aaPredicted RBP21.45■■□□□ 1.02
SEC13-218ENST00000490283 TTC39AQ5SRH9 613 aa21.45■■□□□ 1.02
SEC13-218ENST00000490283 CDC42EP5Q6NZY7 148 aa21.45■■□□□ 1.02
SEC13-218ENST00000490283 CEP85Q6P2H3 762 aa21.45■■□□□ 1.02
SEC13-218ENST00000490283 USP40Q9NVE5 1235 aa21.45■■□□□ 1.02
SEC13-218ENST00000490283 HMG20BQ9P0W2 317 aa21.45■■□□□ 1.02
SEC13-218ENST00000490283 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.02
SEC13-218ENST00000490283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.45■■□□□ 1.02
SEC13-218ENST00000490283 RPAP1Q9BWH6 1393 aaPredicted RBP21.45■■□□□ 1.02
SEC13-218ENST00000490283 ALDH1A1P00352 501 aa21.44■■□□□ 1.02
SEC13-218ENST00000490283 MAP3K9P80192 1104 aa21.44■■□□□ 1.02
SEC13-218ENST00000490283 ERC1Q8IUD2 1116 aa21.44■■□□□ 1.02
SEC13-218ENST00000490283 CDAN1Q8IWY9 1227 aa21.44■■□□□ 1.02
SEC13-218ENST00000490283 FAM151AQ8WW52 585 aa21.44■■□□□ 1.02
SEC13-218ENST00000490283 ELP3Q9H9T3 547 aa21.44■■□□□ 1.02
SEC13-218ENST00000490283 GSTO1P78417 241 aa21.43■■□□□ 1.02
SEC13-218ENST00000490283 HSP90AB4PQ58FF6 505 aa21.43■■□□□ 1.02
SEC13-218ENST00000490283 COG6Q9Y2V7 657 aa21.43■■□□□ 1.02
SEC13-218ENST00000490283 AKAP11Q9UKA4 1901 aa21.43■■□□□ 1.02
SEC13-218ENST00000490283 GAKO14976 1311 aa21.42■■□□□ 1.02
SEC13-218ENST00000490283 HMMRO75330 724 aa21.42■■□□□ 1.02
SEC13-218ENST00000490283 LDHCP07864 332 aa21.42■■□□□ 1.02
SEC13-218ENST00000490283 TCP10Q12799 353 aa21.42■■□□□ 1.02
SEC13-218ENST00000490283 OTUD7BQ6GQQ9 843 aa21.42■■□□□ 1.02
SEC13-218ENST00000490283 RAI14Q9P0K7 980 aa21.42■■□□□ 1.02
SEC13-218ENST00000490283 MROH7-TTC4A0A0A0MT08 1334 aa21.41■■□□□ 1.02
SEC13-218ENST00000490283 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.41■■□□□ 1.02
SEC13-218ENST00000490283 OPTNQ96CV9 577 aa21.41■■□□□ 1.02
SEC13-218ENST00000490283 FAM163AQ96GL9 167 aaPredicted RBP21.41■■□□□ 1.02
SEC13-218ENST00000490283 WRNIP1Q96S55 665 aa21.41■■□□□ 1.02
SEC13-218ENST00000490283 DBNDD2Q9BQY9 259 aa21.41■■□□□ 1.02
SEC13-218ENST00000490283 ZNF341Q9BYN7 854 aa21.41■■□□□ 1.02
SEC13-218ENST00000490283 LRP2BPQ9P2M1 347 aa21.41■■□□□ 1.02
SEC13-218ENST00000490283 TBC1D8O95759 1140 aa21.4■■□□□ 1.02
SEC13-218ENST00000490283 MCAMP43121 646 aa21.4■■□□□ 1.02
SEC13-218ENST00000490283 BTDP43251 543 aa21.4■■□□□ 1.02
SEC13-218ENST00000490283 MECOMQ03112 1051 aa21.4■■□□□ 1.02
SEC13-218ENST00000490283 DGKZQ13574 1117 aa21.4■■□□□ 1.02
SEC13-218ENST00000490283 VGLL4Q14135 290 aa21.4■■□□□ 1.02
SEC13-218ENST00000490283 PI16Q6UXB8 463 aa21.4■■□□□ 1.02
SEC13-218ENST00000490283 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.4■■□□□ 1.02
SEC13-218ENST00000490283 RPAP2Q8IXW5 612 aaPredicted RBP21.4■■□□□ 1.02
SEC13-218ENST00000490283 ABHD8Q96I13 439 aa21.4■■□□□ 1.02
SEC13-218ENST00000490283 NFIAQ12857 509 aa21.39■■□□□ 1.01
SEC13-218ENST00000490283 IFNL1Q8IU54 200 aa21.39■■□□□ 1.01
SEC13-218ENST00000490283 NOL10Q9BSC4 688 aaKnown RBP21.39■■□□□ 1.01
SEC13-218ENST00000490283 EXOC6BQ9Y2D4 811 aa21.39■■□□□ 1.01
SEC13-218ENST00000490283 ENTPD3O75355 529 aa21.38■■□□□ 1.01
SEC13-218ENST00000490283 TBC1D9Q6ZT07 1266 aa21.38■■□□□ 1.01
SEC13-218ENST00000490283 ZSCAN29Q8IWY8 852 aaPredicted RBP21.38■■□□□ 1.01
SEC13-218ENST00000490283 IDI2Q9BXS1 227 aa21.38■■□□□ 1.01
SEC13-218ENST00000490283 MCOLN1Q9GZU1 580 aa21.38■■□□□ 1.01
SEC13-218ENST00000490283 RGS3P49796 1198 aa21.37■■□□□ 1.01
SEC13-218ENST00000490283 PDE3AQ14432 1141 aa21.37■■□□□ 1.01
SEC13-218ENST00000490283 MIGA2Q7L4E1 593 aa21.37■■□□□ 1.01
SEC13-218ENST00000490283 OTUD5Q96G74 571 aa21.37■■□□□ 1.01
SEC13-218ENST00000490283 ZNF512BQ96KM6 892 aaPredicted RBP21.37■■□□□ 1.01
SEC13-218ENST00000490283 CFHR5Q9BXR6 569 aa21.37■■□□□ 1.01
SEC13-218ENST00000490283 SNRKQ9NRH2 765 aa21.37■■□□□ 1.01
SEC13-218ENST00000490283 ZBTB40Q9NUA8 1239 aa21.37■■□□□ 1.01
SEC13-218ENST00000490283 FAM198AQ9UFP1 575 aa21.37■■□□□ 1.01
SEC13-218ENST00000490283 GPR75-ASB3A0A0A6YYF3 556 aa21.36■■□□□ 1.01
SEC13-218ENST00000490283 MAP4K4O95819 1239 aaPredicted RBP21.36■■□□□ 1.01
SEC13-218ENST00000490283 GJA5P36382 358 aa21.36■■□□□ 1.01
SEC13-218ENST00000490283 GTF2A2P52657 109 aa21.36■■□□□ 1.01
SEC13-218ENST00000490283 NOM1Q5C9Z4 860 aaKnown RBP21.36■■□□□ 1.01
SEC13-218ENST00000490283 ERO1BQ86YB8 467 aa21.36■■□□□ 1.01
SEC13-218ENST00000490283 NSUN4Q96CB9 384 aaKnown RBP21.36■■□□□ 1.01
SEC13-218ENST00000490283 CCDC8Q9H0W5 538 aaPredicted RBP21.36■■□□□ 1.01
SEC13-218ENST00000490283 DBNLQ9UJU6 430 aaKnown RBP21.36■■□□□ 1.01
SEC13-218ENST00000490283 CASP8AP2Q9UKL3 1982 aa21.36■■□□□ 1.01
SEC13-218ENST00000490283 SPDYE5A6NIY4 337 aa21.35■■□□□ 1.01
SEC13-218ENST00000490283 GPR25O00155 361 aa21.35■■□□□ 1.01
SEC13-218ENST00000490283 PICALMQ13492 652 aa21.35■■□□□ 1.01
SEC13-218ENST00000490283 CTU1Q7Z7A3 348 aaKnown RBP21.35■■□□□ 1.01
SEC13-218ENST00000490283 AACSQ86V21 672 aa21.35■■□□□ 1.01
SEC13-218ENST00000490283 ZKSCAN4Q969J2 545 aaPredicted RBP21.35■■□□□ 1.01
SEC13-218ENST00000490283 EAF2Q96CJ1 260 aaPredicted RBP21.35■■□□□ 1.01
SEC13-218ENST00000490283 IGSF3O75054 1194 aa21.34■■□□□ 1.01
SEC13-218ENST00000490283 NAA16Q6N069 864 aaPredicted RBP21.34■■□□□ 1.01
SEC13-218ENST00000490283 ZNF296Q8WUU4 475 aaPredicted RBP21.34■■□□□ 1.01
SEC13-218ENST00000490283 SNCAIPQ9Y6H5 919 aa21.34■■□□□ 1.01
SEC13-218ENST00000490283 MYH2Q9UKX2 1941 aa21.33■■□□□ 1.01
SEC13-218ENST00000490283 CCL15-CCL14A0A0B4J2E2 113 aa21.33■■□□□ 1.01
SEC13-218ENST00000490283 IGF2BP3O00425 579 aaKnown RBP eCLIP21.33■■□□□ 1.01
SEC13-218ENST00000490283 FKTNO75072 461 aa21.33■■□□□ 1.01
SEC13-218ENST00000490283 WDHD1O75717 1129 aaPredicted RBP21.33■■□□□ 1.01
SEC13-218ENST00000490283 BAG3O95817 575 aa21.33■■□□□ 1.01
SEC13-218ENST00000490283 CCL15Q16663 113 aa21.33■■□□□ 1.01
SEC13-218ENST00000490283 CLASRPQ8N2M8 674 aaKnown RBP21.33■■□□□ 1.01
SEC13-218ENST00000490283 RHPN1Q8TCX5 695 aa21.33■■□□□ 1.01
SEC13-218ENST00000490283 CNKSR2Q8WXI2 1034 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms