RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CEP120Q8N960 986 aa5.47□□□□□ -1.53
DEPDC1-204ENST00000489862 NETO1Q8TDF5 533 aa5.47□□□□□ -1.53
DEPDC1-204ENST00000489862 ZCCHC4Q9H5U6 513 aa5.47□□□□□ -1.53
DEPDC1-204ENST00000489862 ANO2Q9NQ90 1003 aa5.47□□□□□ -1.53
DEPDC1-204ENST00000489862 POLIQ9UNA4 740 aa5.47□□□□□ -1.53
DEPDC1-204ENST00000489862 TCAF2A6NFQ2 919 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 KRT1P04264 644 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 ACPPP15309 386 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 MZF1P28698 734 aaPredicted RBP5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 AAMPQ13685 434 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 NFIXQ14938 502 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 CYP27C1Q4G0S4 372 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 ERICH6BQ5W0A0 696 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 XKR5Q6UX68 686 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 PBX4Q9BYU1 374 aa5.46□□□□□ -1.54
DEPDC1-204ENST00000489862 TRPA1O75762 1119 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 ABL1P00519 1130 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 RPLP1P05386 114 aaKnown RBP5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 PCSK2P16519 638 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 CES1P23141 567 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 AFMP43652 599 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 ANGEL2Q5VTE6 544 aaKnown RBP5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 PRR23BQ6ZRT6 265 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 TTC16Q8NEE8 873 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 POP1Q99575 1024 aaKnown RBP5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 CRIM1Q9NZV1 1036 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 SALL4Q9UJQ4 1053 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 NUAK1O60285 661 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 ADRB1P08588 477 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 NPR3P17342 541 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 ZNF211Q13398 564 aaPredicted RBP5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 ALKBH2Q6NS38 261 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 CHRDQ9H2X0 955 aa5.45□□□□□ -1.54
DEPDC1-204ENST00000489862 LOC105371045A0A1W2PR82 267 aa5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 NFKBIEO00221 500 aa5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 GLI1P08151 1106 aa5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 FKBP4Q02790 459 aaKnown RBP eCLIP5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 C19orf57Q0VDD7 668 aa5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 C2CD4AQ8NCU7 369 aaPredicted RBP5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 SLC7A3Q8WY07 619 aa5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 HHIPQ96QV1 700 aa5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 CD320Q9NPF0 282 aa5.44□□□□□ -1.54
DEPDC1-204ENST00000489862 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.43□□□□□ -1.54
DEPDC1-204ENST00000489862 FZD6O60353 706 aa5.43□□□□□ -1.54
DEPDC1-204ENST00000489862 FAM13AO94988 1023 aa5.43□□□□□ -1.54
DEPDC1-204ENST00000489862 EXOSC6Q5RKV6 272 aaKnown RBP5.43□□□□□ -1.54
DEPDC1-204ENST00000489862 OGFOD3Q6PK18 319 aa5.43□□□□□ -1.54
DEPDC1-204ENST00000489862 CCDC87Q9NVE4 849 aa5.43□□□□□ -1.54
DEPDC1-204ENST00000489862 DZANK1Q9NVP4 752 aa5.43□□□□□ -1.54
DEPDC1-204ENST00000489862 MTMR7Q9Y216 660 aa5.43□□□□□ -1.54
DEPDC1-204ENST00000489862 EREGO14944 169 aa5.42□□□□□ -1.54
DEPDC1-204ENST00000489862 TNFRSF21O75509 655 aa5.42□□□□□ -1.54
DEPDC1-204ENST00000489862 DRD2P14416 443 aa5.42□□□□□ -1.54
DEPDC1-204ENST00000489862 SOX4Q06945 474 aaPredicted RBP5.42□□□□□ -1.54
DEPDC1-204ENST00000489862 ATG14Q6ZNE5 492 aa5.42□□□□□ -1.54
DEPDC1-204ENST00000489862 FOXD3Q9UJU5 478 aaPredicted RBP5.42□□□□□ -1.54
DEPDC1-204ENST00000489862 SF3B2Q13435 895 aaKnown RBP5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 ZXDCQ2QGD7 858 aaPredicted RBP5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 CXorf38Q8TB03 319 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 USTQ9Y2C2 406 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 A0A0G2JLL6 359 aaPredicted RBP5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 PDE2AO00408 941 aaPredicted RBP5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 PHACTR2O75167 634 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 NFICP08651 508 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 SERPINB4P48594 390 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 NFKB2Q00653 900 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 PLD6Q8N2A8 252 aaKnown RBP5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 PMEPA1Q969W9 287 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 HRASLS5Q96KN8 279 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 USP26Q9BXU7 913 aa5.41□□□□□ -1.54
DEPDC1-204ENST00000489862 CNTNAP4Q9C0A0 1308 aa5.4□□□□□ -1.55
DEPDC1-204ENST00000489862 MED14OSP0DP75 135 aa5.4□□□□□ -1.55
DEPDC1-204ENST00000489862 USP5P45974 858 aa5.4□□□□□ -1.55
DEPDC1-204ENST00000489862 KRTAP10-2P60368 255 aa5.4□□□□□ -1.55
DEPDC1-204ENST00000489862 AOC3Q16853 763 aa5.4□□□□□ -1.55
DEPDC1-204ENST00000489862 TMEM67Q5HYA8 995 aa5.4□□□□□ -1.55
DEPDC1-204ENST00000489862 OSMRQ99650 979 aa5.4□□□□□ -1.55
DEPDC1-204ENST00000489862 ZKSCAN3Q9BRR0 538 aa5.4□□□□□ -1.55
DEPDC1-204ENST00000489862 BMP7P18075 431 aa5.39□□□□□ -1.55
DEPDC1-204ENST00000489862 EHHADHQ08426 723 aa5.39□□□□□ -1.55
DEPDC1-204ENST00000489862 HGSNATQ68CP4 663 aa5.39□□□□□ -1.55
DEPDC1-204ENST00000489862 GJD3Q8N144 294 aa5.39□□□□□ -1.55
DEPDC1-204ENST00000489862 SNX29Q8TEQ0 813 aa5.39□□□□□ -1.55
DEPDC1-204ENST00000489862 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 OVOL3O00110 214 aa5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 ICMTO60725 284 aa5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 POLR3DP05423 398 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 RAB6AP20340 208 aa5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 IFI16Q16666 785 aaKnown RBP5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 TMEM102Q8N9M5 508 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 NXPE3Q969Y0 559 aa5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 LATS2Q9NRM7 1088 aa5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 SOX13Q9UN79 622 aa5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 SMG5Q9UPR3 1016 aaKnown RBP5.38□□□□□ -1.55
DEPDC1-204ENST00000489862 H3BRB1 525 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 EIF4EBP3O60516 100 aaPredicted RBP5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 CELA3BP08861 270 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 LINC00310P59036 64 aa5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 PEAR1Q5VY43 1037 aaPredicted RBP5.37□□□□□ -1.55
DEPDC1-204ENST00000489862 RETREG2Q8NC44 543 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms