RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CNNM3Q8NE01 707 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 ANKK1Q8NFD2 765 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 BORCS6Q96GS4 357 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 ANO2Q9NQ90 1003 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 SH2B1Q9NRF2 756 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 RAB21Q9UL25 225 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 L1RE1Q9UN81 338 aa5.48□□□□□ -1.53
SNRNP40-206ENST00000489853 MYO5CQ9NQX4 1742 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 GOLGA6L9A6NEM1 432 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 IPO7O95373 1038 aaKnown RBP5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 ITGBL1O95965 494 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 PDCP20941 246 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 GJB2P29033 226 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 INPP5BP32019 993 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 LIG3P49916 1009 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 INHBEP58166 350 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 ICA1Q05084 483 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 PPP2R3AQ06190 1150 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 WLSQ5T9L3 541 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 NAIF1Q69YI7 327 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 ARMCX5Q6P1M9 558 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 RUFY3Q7L099 469 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 ARMC2Q8NEN0 867 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 SH3GL3Q99963 347 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 TEX13AQ9BXU3 409 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 TRIM6Q9C030 488 aaPredicted RBP5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 NAT10Q9H0A0 1025 aaKnown RBP5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 GBP3Q9H0R5 595 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 EPC1Q9H2F5 836 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 ANO10Q9NW15 660 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 CHMP3Q9Y3E7 222 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 FAM169AQ9Y6X4 670 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 TTC37Q6PGP7 1564 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 CEP152O94986 1710 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 ERVK-7P63135 1459 aa5.47□□□□□ -1.53
SNRNP40-206ENST00000489853 SOWAHBA6NEL2 793 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 ATP9BO43861 1147 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 RTN2O75298 545 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 HMMRO75330 724 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 GIGYF1O75420 1035 aaPredicted RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 FBXO45P0C2W1 286 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 AK2P54819 239 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 TRAF1Q13077 416 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 TUBB2AQ13885 445 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 PUS10Q3MIT2 529 aaKnown RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 ZC3H12AQ5D1E8 599 aaKnown RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 FBXW10Q5XX13 1052 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 LARP1BQ659C4 914 aaKnown RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 CEP85Q6P2H3 762 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 DHX40Q8IX18 779 aaKnown RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 SLF2Q8IX21 1173 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 AMOTL1Q8IY63 956 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 BICD2Q8TD16 824 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 ERCC4Q92889 916 aaPredicted RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 SYTL4Q96C24 671 aaPredicted RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 SPATA32Q96LK8 384 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 PAIP2Q9BPZ3 127 aaKnown RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 TUBB2BQ9BVA1 445 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 BICC1Q9H694 974 aaKnown RBP5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 ETAA1Q9NY74 926 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 ODF2LQ9ULJ1 636 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 MRFAP1Q9Y605 127 aa5.46□□□□□ -1.53
SNRNP40-206ENST00000489853 NUP153P49790 1475 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 NSD3Q9BZ95 1437 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 A0A1B0GUA9 196 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 SHOX2O60902 331 aaPredicted RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 NR1I2O75469 434 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 NEFHP12036 1026 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 PAX7P23759 505 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 RWDD2BP57060 319 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 TBC1D8BQ0IIM8 1120 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 AP1ARQ63HQ0 302 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 CPLX2Q6PUV4 134 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 C11orf57Q6ZUT1 292 aaPredicted RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 LAPTM4BQ86VI4 370 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 SPATS2Q86XZ4 545 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 ANKRD18AQ8IVF6 992 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 CEP57L1Q8IYX8 460 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 MSANTD4Q8NCY6 345 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 AFAP1L1Q8TED9 768 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 LEO1Q8WVC0 666 aaPredicted RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 N4BP2L2Q92802 583 aaPredicted RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 ZKSCAN4Q969J2 545 aaPredicted RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 XAGE2Q96GT9 111 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 ZFRQ96KR1 1074 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 THUMPD2Q9BTF0 503 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 NUCKS1Q9H1E3 243 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 VIPAS39Q9H9C1 493 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 FANCAO15360 1455 aa5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 ATXN2Q99700 1313 aaKnown RBP5.46□□□□□ -1.54
SNRNP40-206ENST00000489853 NSD2O96028 1365 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 VPS37CA5D8V6 355 aaPredicted RBP5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 A6NNZ2 444 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 N4BP1O75113 896 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 RNF40O75150 1001 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 FSBPO95073 299 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 CFHP08603 1231 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 FNTAP49354 379 aa5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 AARSP49588 968 aaKnown RBP eCLIP5.45□□□□□ -1.54
SNRNP40-206ENST00000489853 OS9Q13438 667 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms