RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 HMG20BQ9P0W2 317 aa23.37■■□□□ 1.33
MRPL55-230ENST00000489430 GAKO14976 1311 aa23.36■■□□□ 1.33
MRPL55-230ENST00000489430 ZBTB48P10074 688 aaPredicted RBP23.36■■□□□ 1.33
MRPL55-230ENST00000489430 DZIP1Q86YF9 867 aaKnown RBP23.36■■□□□ 1.33
MRPL55-230ENST00000489430 SLC10A4Q96EP9 437 aa23.36■■□□□ 1.33
MRPL55-230ENST00000489430 ABCF2Q9UG63 623 aa23.36■■□□□ 1.33
MRPL55-230ENST00000489430 TM4SF4P48230 202 aa23.35■■□□□ 1.33
MRPL55-230ENST00000489430 INHBEP58166 350 aa23.35■■□□□ 1.33
MRPL55-230ENST00000489430 SREBF2Q12772 1141 aa23.35■■□□□ 1.33
MRPL55-230ENST00000489430 SPRYD7Q5W111 196 aa23.35■■□□□ 1.33
MRPL55-230ENST00000489430 CDC42EP5Q6NZY7 148 aa23.35■■□□□ 1.33
MRPL55-230ENST00000489430 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
MRPL55-230ENST00000489430 MYH13Q9UKX3 1938 aa23.34■■□□□ 1.33
MRPL55-230ENST00000489430 FAM151AQ8WW52 585 aa23.34■■□□□ 1.33
MRPL55-230ENST00000489430 RNF186Q9NXI6 227 aa23.34■■□□□ 1.33
MRPL55-230ENST00000489430 MAP4K4O95819 1239 aaPredicted RBP23.33■■□□□ 1.33
MRPL55-230ENST00000489430 MCAMP43121 646 aa23.33■■□□□ 1.33
MRPL55-230ENST00000489430 CACNB3P54284 484 aa23.33■■□□□ 1.33
MRPL55-230ENST00000489430 GSTO1P78417 241 aa23.33■■□□□ 1.33
MRPL55-230ENST00000489430 LDHCP07864 332 aa23.32■■□□□ 1.32
MRPL55-230ENST00000489430 TTC39AQ5SRH9 613 aa23.32■■□□□ 1.32
MRPL55-230ENST00000489430 DCAF15Q66K64 600 aa23.32■■□□□ 1.32
MRPL55-230ENST00000489430 DBNDD2Q9BQY9 259 aa23.32■■□□□ 1.32
MRPL55-230ENST00000489430 IDI2Q9BXS1 227 aa23.32■■□□□ 1.32
MRPL55-230ENST00000489430 USP40Q9NVE5 1235 aa23.32■■□□□ 1.32
MRPL55-230ENST00000489430 FZD1Q9UP38 647 aa23.32■■□□□ 1.32
MRPL55-230ENST00000489430 MANSC4A6NHS7 340 aaPredicted RBP23.31■■□□□ 1.32
MRPL55-230ENST00000489430 MAP3K9P80192 1104 aa23.31■■□□□ 1.32
MRPL55-230ENST00000489430 MECOMQ03112 1051 aa23.31■■□□□ 1.32
MRPL55-230ENST00000489430 MROH7-TTC4A0A0A0MT08 1334 aa23.31■■□□□ 1.32
MRPL55-230ENST00000489430 GPR75-ASB3A0A0A6YYF3 556 aa23.3■■□□□ 1.32
MRPL55-230ENST00000489430 TRPA1O75762 1119 aa23.3■■□□□ 1.32
MRPL55-230ENST00000489430 CDAN1Q8IWY9 1227 aa23.3■■□□□ 1.32
MRPL55-230ENST00000489430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.3■■□□□ 1.323e-6■■■■□ 21.3
MRPL55-230ENST00000489430 EAF2Q96CJ1 260 aaPredicted RBP23.3■■□□□ 1.32
MRPL55-230ENST00000489430 WNK4Q96J92 1243 aa23.3■■□□□ 1.32
MRPL55-230ENST00000489430 CLMNQ96JQ2 1002 aa23.3■■□□□ 1.32
MRPL55-230ENST00000489430 DBNLQ9UJU6 430 aaKnown RBP23.3■■□□□ 1.32
MRPL55-230ENST00000489430 ENTPD3O75355 529 aa23.29■■□□□ 1.32
MRPL55-230ENST00000489430 NPM3O75607 178 aaKnown RBP23.29■■□□□ 1.32
MRPL55-230ENST00000489430 ALDH1A1P00352 501 aa23.29■■□□□ 1.32
MRPL55-230ENST00000489430 PI16Q6UXB8 463 aa23.29■■□□□ 1.32
MRPL55-230ENST00000489430 NSUN4Q96CB9 384 aaKnown RBP23.29■■□□□ 1.32
MRPL55-230ENST00000489430 CFHR5Q9BXR6 569 aa23.29■■□□□ 1.32
MRPL55-230ENST00000489430 TSKSQ9UJT2 592 aa23.29■■□□□ 1.32
MRPL55-230ENST00000489430 EXOC6BQ9Y2D4 811 aa23.29■■□□□ 1.32
MRPL55-230ENST00000489430 CSADQ9Y600 493 aa23.29■■□□□ 1.32
MRPL55-230ENST00000489430 RAB11FIP3O75154 756 aa23.28■■□□□ 1.32
MRPL55-230ENST00000489430 NOM1Q5C9Z4 860 aaKnown RBP23.28■■□□□ 1.32
MRPL55-230ENST00000489430 TMED8Q6PL24 325 aaPredicted RBP23.28■■□□□ 1.32
MRPL55-230ENST00000489430 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.28■■□□□ 1.32
MRPL55-230ENST00000489430 SIRT2Q8IXJ6 389 aa23.28■■□□□ 1.32
MRPL55-230ENST00000489430 RHPN1Q8TCX5 695 aa23.28■■□□□ 1.32
MRPL55-230ENST00000489430 KIF1BPQ96EK5 621 aa23.28■■□□□ 1.32
MRPL55-230ENST00000489430 LRP2BPQ9P2M1 347 aa23.28■■□□□ 1.32
MRPL55-230ENST00000489430 FAM198AQ9UFP1 575 aa23.28■■□□□ 1.32
MRPL55-230ENST00000489430 NFIAQ12857 509 aa23.27■■□□□ 1.32
MRPL55-230ENST00000489430 TBC1D9Q6ZT07 1266 aa23.27■■□□□ 1.32
MRPL55-230ENST00000489430 ZNF384Q8TF68 577 aa23.27■■□□□ 1.32
MRPL55-230ENST00000489430 RAI14Q9P0K7 980 aa23.27■■□□□ 1.32
MRPL55-230ENST00000489430 RFX7Q2KHR2 1363 aa23.27■■□□□ 1.31
MRPL55-230ENST00000489430 BTDP43251 543 aa23.26■■□□□ 1.31
MRPL55-230ENST00000489430 VGLL4Q14135 290 aa23.26■■□□□ 1.31
MRPL55-230ENST00000489430 C20orf194Q5TEA3 1177 aa23.26■■□□□ 1.31
MRPL55-230ENST00000489430 CLASRPQ8N2M8 674 aaKnown RBP23.26■■□□□ 1.31
MRPL55-230ENST00000489430 ZNF341Q9BYN7 854 aa23.26■■□□□ 1.31
MRPL55-230ENST00000489430 CCDC8Q9H0W5 538 aaPredicted RBP23.26■■□□□ 1.31
MRPL55-230ENST00000489430 TCP10Q12799 353 aa23.25■■□□□ 1.31
MRPL55-230ENST00000489430 MKRN3Q13064 507 aaKnown RBP23.25■■□□□ 1.31
MRPL55-230ENST00000489430 AACSQ86V21 672 aa23.25■■□□□ 1.31
MRPL55-230ENST00000489430 TESPA1A2RU30 521 aaPredicted RBP23.24■■□□□ 1.31
MRPL55-230ENST00000489430 WDHD1O75717 1129 aaPredicted RBP23.24■■□□□ 1.31
MRPL55-230ENST00000489430 CYP2E1P05181 493 aaPredicted RBP23.24■■□□□ 1.31
MRPL55-230ENST00000489430 RGS3P49796 1198 aa23.24■■□□□ 1.31
MRPL55-230ENST00000489430 RHBDL3P58872 404 aa23.24■■□□□ 1.31
MRPL55-230ENST00000489430 OTUD7BQ6GQQ9 843 aa23.24■■□□□ 1.31
MRPL55-230ENST00000489430 OPTNQ96CV9 577 aa23.24■■□□□ 1.31
MRPL55-230ENST00000489430 WRNIP1Q96S55 665 aa23.24■■□□□ 1.31
MRPL55-230ENST00000489430 ZNF112Q9UJU3 913 aa23.24■■□□□ 1.31
MRPL55-230ENST00000489430 ELP3Q9H9T3 547 aa23.23■■□□□ 1.31
MRPL55-230ENST00000489430 SNRKQ9NRH2 765 aa23.23■■□□□ 1.31
MRPL55-230ENST00000489430 TLR7Q9NYK1 1049 aaKnown RBP23.23■■□□□ 1.31
MRPL55-230ENST00000489430 SPDYE5A6NIY4 337 aa23.22■■□□□ 1.31
MRPL55-230ENST00000489430 BAG3O95817 575 aa23.22■■□□□ 1.31
MRPL55-230ENST00000489430 PLCG2P16885 1265 aa23.22■■□□□ 1.31
MRPL55-230ENST00000489430 GJA5P36382 358 aa23.22■■□□□ 1.31
MRPL55-230ENST00000489430 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
MRPL55-230ENST00000489430 NAA16Q6N069 864 aaPredicted RBP23.22■■□□□ 1.31
MRPL55-230ENST00000489430 ERO1BQ86YB8 467 aa23.22■■□□□ 1.31
MRPL55-230ENST00000489430 IFNL1Q8IU54 200 aa23.22■■□□□ 1.31
MRPL55-230ENST00000489430 ZAP70P43403 619 aa23.21■■□□□ 1.31
MRPL55-230ENST00000489430 GTF2A2P52657 109 aa23.21■■□□□ 1.31
MRPL55-230ENST00000489430 PPP4CP60510 307 aa23.21■■□□□ 1.31
MRPL55-230ENST00000489430 CERS3Q8IU89 383 aa23.21■■□□□ 1.31
MRPL55-230ENST00000489430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.21■■□□□ 1.31
MRPL55-230ENST00000489430 NOL10Q9BSC4 688 aaKnown RBP23.21■■□□□ 1.31
MRPL55-230ENST00000489430 SNCAIPQ9Y6H5 919 aa23.21■■□□□ 1.31
MRPL55-230ENST00000489430 ATRNL1Q5VV63 1379 aa23.2■■□□□ 1.3
MRPL55-230ENST00000489430 MIGA2Q7L4E1 593 aa23.2■■□□□ 1.3
MRPL55-230ENST00000489430 IL1RAPL2Q9NP60 686 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms