RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 DIXDC1Q155Q3 683 aa17.03■□□□□ 0.32
SPTLC1-207ENST00000488921 DZIP1Q86YF9 867 aaKnown RBP17.03■□□□□ 0.32
SPTLC1-207ENST00000488921 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
SPTLC1-207ENST00000488921 GPR108Q9NPR9 543 aa17.02■□□□□ 0.32
SPTLC1-207ENST00000488921 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
SPTLC1-207ENST00000488921 ABCF2Q9UG63 623 aa17.02■□□□□ 0.32
SPTLC1-207ENST00000488921 CSADQ9Y600 493 aa17.02■□□□□ 0.32
SPTLC1-207ENST00000488921 DGKZQ13574 1117 aa17.01■□□□□ 0.31
SPTLC1-207ENST00000488921 NOM1Q5C9Z4 860 aaKnown RBP17.01■□□□□ 0.31
SPTLC1-207ENST00000488921 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
SPTLC1-207ENST00000488921 CDAN1Q8IWY9 1227 aa17.01■□□□□ 0.31
SPTLC1-207ENST00000488921 CFHR5Q9BXR6 569 aa17.01■□□□□ 0.31
SPTLC1-207ENST00000488921 MCOLN1Q9GZU1 580 aa17.01■□□□□ 0.31
SPTLC1-207ENST00000488921 C1orf115Q9H7X2 142 aa17.01■□□□□ 0.31
SPTLC1-207ENST00000488921 GAKO14976 1311 aa17■□□□□ 0.31
SPTLC1-207ENST00000488921 UQCRFS1P1P0C7P4 283 aa17■□□□□ 0.31
SPTLC1-207ENST00000488921 ARID4AP29374 1257 aaPredicted RBP17■□□□□ 0.31
SPTLC1-207ENST00000488921 MAP3K9P80192 1104 aa17■□□□□ 0.31
SPTLC1-207ENST00000488921 CDC42EP5Q6NZY7 148 aa17■□□□□ 0.31
SPTLC1-207ENST00000488921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17■□□□□ 0.31
SPTLC1-207ENST00000488921 FAM151AQ8WW52 585 aa17■□□□□ 0.31
SPTLC1-207ENST00000488921 ELP3Q9H9T3 547 aa17■□□□□ 0.31
SPTLC1-207ENST00000488921 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 VGLL4Q14135 290 aa16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 IFNL1Q8IU54 200 aa16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 SPATA5Q8NB90 893 aa16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
SPTLC1-207ENST00000488921 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 TNNI3KQ59H18 835 aa16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 PANK1Q8TE04 598 aa16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 WRNIP1Q96S55 665 aa16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 ZNF341Q9BYN7 854 aa16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 USP40Q9NVE5 1235 aa16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 FPGT-TNNI3KV9GXZ4 949 aa16.98■□□□□ 0.31
SPTLC1-207ENST00000488921 MROH7-TTC4A0A0A0MT08 1334 aa16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 GJA5P36382 358 aa16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 GSTO1P78417 241 aa16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 TCP10Q12799 353 aa16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 CCDC158Q5M9N0 1113 aa16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 TTC39AQ5SRH9 613 aa16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 CTU1Q7Z7A3 348 aaKnown RBP16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 FAM163AQ96GL9 167 aaPredicted RBP16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 CHMP4BQ9H444 224 aaKnown RBP16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 DDX19BQ9UMR2 479 aa16.97■□□□□ 0.31
SPTLC1-207ENST00000488921 GPR25O00155 361 aa16.96■□□□□ 0.31
SPTLC1-207ENST00000488921 LDHCP07864 332 aa16.96■□□□□ 0.31
SPTLC1-207ENST00000488921 NFIAQ12857 509 aa16.96■□□□□ 0.31
SPTLC1-207ENST00000488921 ERC1Q8IUD2 1116 aa16.96■□□□□ 0.31
SPTLC1-207ENST00000488921 ZNF296Q8WUU4 475 aaPredicted RBP16.96■□□□□ 0.31
SPTLC1-207ENST00000488921 IDI2Q9BXS1 227 aa16.96■□□□□ 0.31
SPTLC1-207ENST00000488921 RCAN3Q9UKA8 241 aa16.96■□□□□ 0.31
SPTLC1-207ENST00000488921 RFX7Q2KHR2 1363 aa16.96■□□□□ 0.31
SPTLC1-207ENST00000488921 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 TESPA1A2RU30 521 aaPredicted RBP16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 SPDYE5A6NIY4 337 aa16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 ENTPD3O75355 529 aa16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 MCAMP43121 646 aa16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 BTDP43251 543 aa16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 GTF2A2P52657 109 aa16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 MECOMQ03112 1051 aa16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 ERO1BQ86YB8 467 aa16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
SPTLC1-207ENST00000488921 FOCADQ5VW36 1801 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 CCDC85CA6NKD9 419 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 FKTNO75072 461 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 RGS3P49796 1198 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 PKN2Q16513 984 aaKnown RBP16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 HSP90AB4PQ58FF6 505 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 DBNDD2Q9BQY9 259 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 RAI14Q9P0K7 980 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 SNCAIPQ9Y6H5 919 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 DOCK1Q14185 1865 aa16.94■□□□□ 0.3
SPTLC1-207ENST00000488921 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
SPTLC1-207ENST00000488921 GPR75-ASB3A0A0A6YYF3 556 aa16.93■□□□□ 0.3
SPTLC1-207ENST00000488921 IGSF3O75054 1194 aa16.93■□□□□ 0.3
SPTLC1-207ENST00000488921 MIGA2Q7L4E1 593 aa16.93■□□□□ 0.3
SPTLC1-207ENST00000488921 NSUN4Q96CB9 384 aaKnown RBP16.93■□□□□ 0.3
SPTLC1-207ENST00000488921 MS4A4AQ96JQ5 239 aa16.93■□□□□ 0.3
SPTLC1-207ENST00000488921 NOL10Q9BSC4 688 aaKnown RBP16.93■□□□□ 0.3
SPTLC1-207ENST00000488921 LRP2BPQ9P2M1 347 aa16.93■□□□□ 0.3
SPTLC1-207ENST00000488921 CCL15-CCL14A0A0B4J2E2 113 aa16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 HMMRO75330 724 aa16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 PPIL2Q13356 520 aa16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 CCL15Q16663 113 aa16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 ZSCAN29Q8IWY8 852 aaPredicted RBP16.92■□□□□ 0.3
SPTLC1-207ENST00000488921 RPAP2Q8IXW5 612 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms