RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 C20orf194Q5TEA3 1177 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 APOBEC3HQ6NTF7 200 aaKnown RBP13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 FAM83AQ86UY5 434 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 RASAL3Q86YV0 1011 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 ANKRD13AQ8IZ07 590 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 IL1RAPL2Q9NP60 686 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 SNRKQ9NRH2 765 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 PAPPA2Q9BXP8 1791 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 CEP350Q5VT06 3117 aa13.68□□□□□ -0.22
ARHGEF39-204ENST00000488918 ZBTB22O15209 634 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 PLCG2P16885 1265 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 BTDP43251 543 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 LBX1P52954 281 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 MECOMQ03112 1051 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 OTUD7BQ6GQQ9 843 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 NAA16Q6N069 864 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 CDC42EP5Q6NZY7 148 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 TNS4Q8IZW8 715 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 GPATCH3Q96I76 525 aa13.67□□□□□ -0.22
ARHGEF39-204ENST00000488918 POLR2AP24928 1970 aaKnown RBP13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 WDHD1O75717 1129 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 IDH1O75874 414 aaKnown RBP13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 MCAMP43121 646 aa13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 PICALMQ13492 652 aa13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 TTF1Q15361 905 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 FAM151AQ8WW52 585 aa13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 TRIM34Q9BYJ4 488 aa13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 LRRCC1Q9C099 1032 aa13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 PRDM10Q9NQV6 1147 aa13.66□□□□□ -0.22
ARHGEF39-204ENST00000488918 MROH7-TTC4A0A0A0MT08 1334 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 FAM155AB1AL88 458 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 IGSF3O75054 1194 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 TRPA1O75762 1119 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 MAP4K4O95819 1239 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 ZBTB48P10074 688 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 INHBEP58166 350 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 MAP3K12Q12852 859 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 EAF2Q96CJ1 260 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 ZNF512BQ96KM6 892 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 DBNLQ9UJU6 430 aaKnown RBP13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
ARHGEF39-204ENST00000488918 ARAP2Q8WZ64 1704 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 MAP3K11Q16584 847 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 LDLRAD1Q5T700 205 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 FAM163AQ96GL9 167 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 WRNIP1Q96S55 665 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 ELP3Q9H9T3 547 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 MYH13Q9UKX3 1938 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 AOX1Q06278 1338 aa13.64□□□□□ -0.23
ARHGEF39-204ENST00000488918 ENTPD3O75355 529 aa13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 ALDH1A1P00352 501 aa13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 HSPA8P11142 646 aaKnown RBP13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 ZAP70P43403 619 aa13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 RGS3P49796 1198 aa13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 COL13A1Q5TAT6 717 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 SPRYD7Q5W111 196 aa13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 MIGA2Q7L4E1 593 aa13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 TEX11Q8IYF3 940 aa13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 NSUN4Q96CB9 384 aaKnown RBP13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 TLR7Q9NYK1 1049 aaKnown RBP13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 GAKO14976 1311 aa13.63□□□□□ -0.23
ARHGEF39-204ENST00000488918 ZNF646O15015 1829 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 CYP7A1P22680 504 aa13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 OPTNQ96CV9 577 aa13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 WNK4Q96J92 1243 aa13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 CLMNQ96JQ2 1002 aa13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 PICK1Q9NRD5 415 aa13.62□□□□□ -0.23
ARHGEF39-204ENST00000488918 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 CYP2E1P05181 493 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 SIRT2Q8IXJ6 389 aa13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 OTUD5Q96G74 571 aa13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 ZIC5Q96T25 663 aa13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 IDI2Q9BXS1 227 aa13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 RNF186Q9NXI6 227 aa13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 AATFQ9NY61 560 aaKnown RBP eCLIP13.61□□□□□ -0.23
ARHGEF39-204ENST00000488918 ECM29Q5VYK3 1845 aa13.6□□□□□ -0.23
ARHGEF39-204ENST00000488918 USP5P45974 858 aa13.6□□□□□ -0.23
ARHGEF39-204ENST00000488918 GTF2A2P52657 109 aa13.6□□□□□ -0.23
ARHGEF39-204ENST00000488918 NFIAQ12857 509 aa13.6□□□□□ -0.23
ARHGEF39-204ENST00000488918 AAMPQ13685 434 aa13.6□□□□□ -0.23
ARHGEF39-204ENST00000488918 VGLL4Q14135 290 aa13.6□□□□□ -0.23
ARHGEF39-204ENST00000488918 MAGEB6Q8N7X4 407 aa13.6□□□□□ -0.23
ARHGEF39-204ENST00000488918 GOLIM4O00461 696 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms