RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
CHD1L-208ENST00000488864 SYAP1Q96A49 352 aaPredicted RBP15.69■□□□□ 0.1
CHD1L-208ENST00000488864 INTS4Q96HW7 963 aaKnown RBP15.69■□□□□ 0.1
CHD1L-208ENST00000488864 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
CHD1L-208ENST00000488864 MYH13Q9UKX3 1938 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 M0R2C6 588 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 ECE2O60344 883 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 PTH1RQ03431 593 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 MCMDC2Q4G0Z9 681 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 TPRNQ4KMQ1 711 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 DNTTIP2Q5QJE6 756 aaKnown RBP15.68■□□□□ 0.1
CHD1L-208ENST00000488864 MYRIPQ8NFW9 859 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 USP25Q9UHP3 1055 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 MAST3O60307 1309 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 LRRFIP1Q32MZ4 808 aaKnown RBP15.68■□□□□ 0.1
CHD1L-208ENST00000488864 MFSD14BQ5SR56 506 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 TTLL5Q6EMB2 1281 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 SUPT20HQ8NEM7 779 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 ZNF384Q8TF68 577 aa15.68■□□□□ 0.1
CHD1L-208ENST00000488864 RFX7Q2KHR2 1363 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 ZFYP08048 801 aaPredicted RBP15.67■□□□□ 0.1
CHD1L-208ENST00000488864 MCCP23508 829 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 SOGA3Q5TF21 947 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 ADGRA1Q86SQ6 560 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 SMAP1Q8IYB5 467 aaPredicted RBP15.67■□□□□ 0.1
CHD1L-208ENST00000488864 LARGE2Q8N3Y3 721 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 MIGA1Q8NAN2 632 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 WDR66Q8TBY9 1149 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 APPBP2Q92624 585 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 PSMD1Q99460 953 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 TTC12Q9H892 705 aaPredicted RBP15.67■□□□□ 0.1
CHD1L-208ENST00000488864 TCRBV5S4A2TA0A5A2 114 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 NFKBIEO00221 500 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 VPS53Q5VIR6 699 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 ZSCAN25Q6NSZ9 544 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 TCHHQ07283 1943 aa15.67■□□□□ 0.1
CHD1L-208ENST00000488864 CYP7A1P22680 504 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 RASSF7Q02833 373 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 MECOMQ03112 1051 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 LSG1Q9H089 658 aaKnown RBP15.66■□□□□ 0.1
CHD1L-208ENST00000488864 HELLSQ9NRZ9 838 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 PDS5AQ29RF7 1337 aaKnown RBP15.66■□□□□ 0.1
CHD1L-208ENST00000488864 F8W031 263 aaPredicted RBP15.66■□□□□ 0.1
CHD1L-208ENST00000488864 LDHBP07195 334 aaKnown RBP15.66■□□□□ 0.1
CHD1L-208ENST00000488864 ANAPC15P60006 121 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 NOLC1Q14978 699 aaKnown RBP eCLIP15.66■□□□□ 0.14e-7■■■■□ 25.6
CHD1L-208ENST00000488864 UBE3CQ15386 1083 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 PODNQ7Z5L7 613 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 ZNF710Q8N1W2 664 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 PIBF1Q8WXW3 757 aa15.66■□□□□ 0.1
CHD1L-208ENST00000488864 NSUN4Q96CB9 384 aaKnown RBP15.66■□□□□ 0.1
CHD1L-208ENST00000488864 YDJCA8MPS7 323 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 ADCY5O95622 1261 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 DIXDC1Q155Q3 683 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 GRIPAP1Q4V328 841 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 NAA16Q6N069 864 aaPredicted RBP15.65■□□□□ 0.1
CHD1L-208ENST00000488864 DZIP1Q86YF9 867 aaKnown RBP15.65■□□□□ 0.1
CHD1L-208ENST00000488864 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
CHD1L-208ENST00000488864 CCDC171Q6TFL3 1326 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 RAD50Q92878 1312 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 GPAA1O43292 621 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 UVSSAQ2YD98 709 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 CERS5Q8N5B7 392 aa15.65■□□□□ 0.1
CHD1L-208ENST00000488864 MYH7P12883 1935 aa15.64■□□□□ 0.09
CHD1L-208ENST00000488864 AIDAQ96BJ3 306 aa15.64■□□□□ 0.09
CHD1L-208ENST00000488864 CNPY2Q9Y2B0 182 aa15.64■□□□□ 0.09
CHD1L-208ENST00000488864 COL4A5P29400 1685 aa15.64■□□□□ 0.09
CHD1L-208ENST00000488864 RPAP1Q9BWH6 1393 aaPredicted RBP15.64■□□□□ 0.09
CHD1L-208ENST00000488864 WDR33Q9C0J8 1336 aaKnown RBP15.64■□□□□ 0.09
CHD1L-208ENST00000488864 IARSP41252 1262 aaKnown RBP15.64■□□□□ 0.09
CHD1L-208ENST00000488864 ARMT1Q9H993 441 aa15.64■□□□□ 0.09
CHD1L-208ENST00000488864 SCN9AQ15858 1988 aa15.63■□□□□ 0.09
CHD1L-208ENST00000488864 FAM205AQ6ZU69 1335 aa15.63■□□□□ 0.09
CHD1L-208ENST00000488864 SALL1Q9NSC2 1324 aa15.63■□□□□ 0.09
CHD1L-208ENST00000488864 DOCK2Q92608 1830 aa15.63■□□□□ 0.09
CHD1L-208ENST00000488864 RAD17O75943 681 aa15.63■□□□□ 0.09
CHD1L-208ENST00000488864 MBD4O95243 580 aa15.63■□□□□ 0.09
CHD1L-208ENST00000488864 SPTY2D1Q68D10 685 aaPredicted RBP15.63■□□□□ 0.09
CHD1L-208ENST00000488864 ARHGAP27Q6ZUM4 889 aa15.63■□□□□ 0.09
CHD1L-208ENST00000488864 HSPD1P10809 573 aaKnown RBP15.62■□□□□ 0.09
CHD1L-208ENST00000488864 PRELPP51888 382 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 DYNLL1P63167 89 aaKnown RBP15.62■□□□□ 0.09
CHD1L-208ENST00000488864 CCDC183Q5T5S1 534 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 LCORLQ8N3X6 602 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 FAM184AQ8NB25 1140 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 TBC1D22AQ8WUA7 517 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 IL17RAQ96F46 866 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 LARP6Q9BRS8 491 aaKnown RBP15.62■□□□□ 0.09
CHD1L-208ENST00000488864 USP17L3A6NCW0 530 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 USP17L4A6NCW7 530 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 USP17L1Q7RTZ2 530 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 TICAM2Q86XR7 235 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 KIAA0825Q8IV33 1275 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 PRIMPOLQ96LW4 560 aa15.62■□□□□ 0.09
CHD1L-208ENST00000488864 AATFQ9NY61 560 aaKnown RBP eCLIP15.62■□□□□ 0.09
CHD1L-208ENST00000488864 RBM8AQ9Y5S9 174 aaKnown RBP15.62■□□□□ 0.09
CHD1L-208ENST00000488864 YBX3P16989 372 aaKnown RBP eCLIP15.61■□□□□ 0.091e-6■□□□□ 11
CHD1L-208ENST00000488864 SCNN1DP51172 638 aa15.61■□□□□ 0.09
CHD1L-208ENST00000488864 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms