RNA–Protein interactions for RNA: ENST00000488685.1

SH2D3C-212, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best)

Gene SH2D3C, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-212ENST00000488685 BEGAINQ9BUH8 593 aa16.9■□□□□ 0.3
SH2D3C-212ENST00000488685 GAKO14976 1311 aa16.9■□□□□ 0.3
SH2D3C-212ENST00000488685 TBC1D9Q6ZT07 1266 aa16.89■□□□□ 0.29
SH2D3C-212ENST00000488685 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
SH2D3C-212ENST00000488685 REM2Q8IYK8 340 aaPredicted RBP16.89■□□□□ 0.29
SH2D3C-212ENST00000488685 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
SH2D3C-212ENST00000488685 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.29
SH2D3C-212ENST00000488685 FZD1Q9UP38 647 aa16.89■□□□□ 0.29
SH2D3C-212ENST00000488685 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
SH2D3C-212ENST00000488685 MECOMQ03112 1051 aa16.88■□□□□ 0.29
SH2D3C-212ENST00000488685 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
SH2D3C-212ENST00000488685 USP40Q9NVE5 1235 aa16.88■□□□□ 0.29
SH2D3C-212ENST00000488685 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
SH2D3C-212ENST00000488685 MYH2Q9UKX2 1941 aa16.88■□□□□ 0.29
SH2D3C-212ENST00000488685 PCNTO95613 3336 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 CA12O43570 354 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 IGSF3O75054 1194 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 RRP1P56182 461 aaKnown RBP16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 COL13A1Q5TAT6 717 aaPredicted RBP16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 AACSQ86V21 672 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 ZNF384Q8TF68 577 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 FAM151AQ8WW52 585 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 NSUN4Q96CB9 384 aaKnown RBP16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 SLC10A4Q96EP9 437 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 CSRNP1Q96S65 589 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 PRDM10Q9NQV6 1147 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 AKAP11Q9UKA4 1901 aa16.87■□□□□ 0.29
SH2D3C-212ENST00000488685 GPR75-ASB3A0A0A6YYF3 556 aa16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 LDHCP07864 332 aa16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 GSTO1P78417 241 aa16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 ANKRD13AQ8IZ07 590 aa16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 RAI14Q9P0K7 980 aa16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 LRP2BPQ9P2M1 347 aa16.86■□□□□ 0.29
SH2D3C-212ENST00000488685 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
SH2D3C-212ENST00000488685 LBX1P52954 281 aa16.85■□□□□ 0.29
SH2D3C-212ENST00000488685 NFIAQ12857 509 aa16.85■□□□□ 0.29
SH2D3C-212ENST00000488685 HOOK2Q96ED9 719 aa16.85■□□□□ 0.29
SH2D3C-212ENST00000488685 IDI2Q9BXS1 227 aa16.85■□□□□ 0.29
SH2D3C-212ENST00000488685 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
SH2D3C-212ENST00000488685 MROH7-TTC4A0A0A0MT08 1334 aa16.85■□□□□ 0.29
SH2D3C-212ENST00000488685 RPAP1Q9BWH6 1393 aaPredicted RBP16.85■□□□□ 0.29
SH2D3C-212ENST00000488685 MAP4K4O95819 1239 aaPredicted RBP16.84■□□□□ 0.29
SH2D3C-212ENST00000488685 ZAP70P43403 619 aa16.84■□□□□ 0.29
SH2D3C-212ENST00000488685 SPRYD7Q5W111 196 aa16.84■□□□□ 0.29
SH2D3C-212ENST00000488685 CLMNQ96JQ2 1002 aa16.84■□□□□ 0.29
SH2D3C-212ENST00000488685 APBB1O00213 710 aa16.83■□□□□ 0.28
SH2D3C-212ENST00000488685 ENTPD3O75355 529 aa16.83■□□□□ 0.28
SH2D3C-212ENST00000488685 BTDP43251 543 aa16.83■□□□□ 0.28
SH2D3C-212ENST00000488685 TM4SF4P48230 202 aa16.83■□□□□ 0.28
SH2D3C-212ENST00000488685 MAP3K9P80192 1104 aa16.83■□□□□ 0.28
SH2D3C-212ENST00000488685 TCP10Q12799 353 aa16.83■□□□□ 0.28
SH2D3C-212ENST00000488685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.83■□□□□ 0.28
SH2D3C-212ENST00000488685 SAGE1Q9NXZ1 904 aa16.83■□□□□ 0.28
SH2D3C-212ENST00000488685 WDHD1O75717 1129 aaPredicted RBP16.82■□□□□ 0.28
SH2D3C-212ENST00000488685 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
SH2D3C-212ENST00000488685 ZBTB48P10074 688 aaPredicted RBP16.82■□□□□ 0.28
SH2D3C-212ENST00000488685 RHBDL3P58872 404 aa16.82■□□□□ 0.28
SH2D3C-212ENST00000488685 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.82■□□□□ 0.28
SH2D3C-212ENST00000488685 ZFPM1Q8IX07 1006 aa16.82■□□□□ 0.28
SH2D3C-212ENST00000488685 DCTPP1Q9H773 170 aa16.82■□□□□ 0.28
SH2D3C-212ENST00000488685 RNF186Q9NXI6 227 aa16.82■□□□□ 0.28
SH2D3C-212ENST00000488685 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
SH2D3C-212ENST00000488685 RGS3P49796 1198 aa16.81■□□□□ 0.28
SH2D3C-212ENST00000488685 DCAF15Q66K64 600 aa16.81■□□□□ 0.28
SH2D3C-212ENST00000488685 NAA16Q6N069 864 aaPredicted RBP16.81■□□□□ 0.28
SH2D3C-212ENST00000488685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
SH2D3C-212ENST00000488685 WNK4Q96J92 1243 aa16.81■□□□□ 0.28
SH2D3C-212ENST00000488685 PIH1D3Q9NQM4 214 aaKnown RBP16.81■□□□□ 0.28
SH2D3C-212ENST00000488685 RFX7Q2KHR2 1363 aa16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 INHBEP58166 350 aa16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 PPP4CP60510 307 aa16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 MKRN3Q13064 507 aaKnown RBP16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 MIGA2Q7L4E1 593 aa16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 ZNF341Q9BYN7 854 aa16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 LRRCC1Q9C099 1032 aa16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 TSKSQ9UJT2 592 aa16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 PCDHB15Q9Y5E8 787 aa16.8■□□□□ 0.28
SH2D3C-212ENST00000488685 MANSC4A6NHS7 340 aaPredicted RBP16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 TRPA1O75762 1119 aa16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 BAG3O95817 575 aa16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 SREBF2Q12772 1141 aa16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 VGLL4Q14135 290 aa16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 TMED8Q6PL24 325 aaPredicted RBP16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 CRBNQ96SW2 442 aa16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 ANTXR1Q9H6X2 564 aa16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 ELP3Q9H9T3 547 aa16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 ZNF112Q9UJU3 913 aa16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 MYO5AQ9Y4I1 1855 aaKnown RBP16.79■□□□□ 0.28
SH2D3C-212ENST00000488685 OTOFQ9HC10 1997 aa16.78■□□□□ 0.28
SH2D3C-212ENST00000488685 MAP3K10Q02779 954 aa16.78■□□□□ 0.28
SH2D3C-212ENST00000488685 SH3BP5LQ7L8J4 393 aa16.78■□□□□ 0.28
SH2D3C-212ENST00000488685 WRNIP1Q96S55 665 aa16.78■□□□□ 0.28
SH2D3C-212ENST00000488685 NOL10Q9BSC4 688 aaKnown RBP16.78■□□□□ 0.28
SH2D3C-212ENST00000488685 DDX4Q9NQI0 724 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms