RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SPATA5Q8NB90 893 aa21.85■■□□□ 1.09
ITGB1-215ENST00000488494 WNK4Q96J92 1243 aa21.85■■□□□ 1.09
ITGB1-215ENST00000488494 GPR108Q9NPR9 543 aa21.85■■□□□ 1.09
ITGB1-215ENST00000488494 MYH2Q9UKX2 1941 aa21.84■■□□□ 1.09
ITGB1-215ENST00000488494 MAST2Q6P0Q8 1798 aa21.84■■□□□ 1.09
ITGB1-215ENST00000488494 GAKO14976 1311 aa21.84■■□□□ 1.09
ITGB1-215ENST00000488494 SREBF2Q12772 1141 aa21.84■■□□□ 1.09
ITGB1-215ENST00000488494 SPTY2D1Q68D10 685 aaPredicted RBP21.84■■□□□ 1.09
ITGB1-215ENST00000488494 ANKRD13AQ8IZ07 590 aa21.84■■□□□ 1.09
ITGB1-215ENST00000488494 DBNDD2Q9BQY9 259 aa21.84■■□□□ 1.09
ITGB1-215ENST00000488494 DDX19BQ9UMR2 479 aa21.84■■□□□ 1.09
ITGB1-215ENST00000488494 UNCXA6NJT0 531 aa21.83■■□□□ 1.09
ITGB1-215ENST00000488494 MCAMP43121 646 aa21.83■■□□□ 1.09
ITGB1-215ENST00000488494 NFIAQ12857 509 aa21.83■■□□□ 1.09
ITGB1-215ENST00000488494 UQCRFS1P1P0C7P4 283 aa21.82■■□□□ 1.08
ITGB1-215ENST00000488494 ZBTB48P10074 688 aaPredicted RBP21.82■■□□□ 1.08
ITGB1-215ENST00000488494 TCP10Q12799 353 aa21.82■■□□□ 1.08
ITGB1-215ENST00000488494 TTC39AQ5SRH9 613 aa21.82■■□□□ 1.08
ITGB1-215ENST00000488494 ERICH6Q7L0X2 663 aa21.82■■□□□ 1.08
ITGB1-215ENST00000488494 ELP3Q9H9T3 547 aa21.82■■□□□ 1.08
ITGB1-215ENST00000488494 USP40Q9NVE5 1235 aa21.82■■□□□ 1.08
ITGB1-215ENST00000488494 TLR7Q9NYK1 1049 aaKnown RBP21.82■■□□□ 1.08
ITGB1-215ENST00000488494 EXOC6BQ9Y2D4 811 aa21.82■■□□□ 1.08
ITGB1-215ENST00000488494 RFX7Q2KHR2 1363 aa21.82■■□□□ 1.08
ITGB1-215ENST00000488494 MROH7-TTC4A0A0A0MT08 1334 aa21.81■■□□□ 1.08
ITGB1-215ENST00000488494 GJA5P36382 358 aa21.81■■□□□ 1.08
ITGB1-215ENST00000488494 TM4SF4P48230 202 aa21.81■■□□□ 1.08
ITGB1-215ENST00000488494 MECOMQ03112 1051 aa21.81■■□□□ 1.08
ITGB1-215ENST00000488494 VGLL4Q14135 290 aa21.81■■□□□ 1.08
ITGB1-215ENST00000488494 TBC1D9Q6ZT07 1266 aa21.81■■□□□ 1.08
ITGB1-215ENST00000488494 SLF2Q8IX21 1173 aa21.81■■□□□ 1.08
ITGB1-215ENST00000488494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.81■■□□□ 1.08
ITGB1-215ENST00000488494 CASP8AP2Q9UKL3 1982 aa21.81■■□□□ 1.08
ITGB1-215ENST00000488494 C20orf194Q5TEA3 1177 aa21.8■■□□□ 1.08
ITGB1-215ENST00000488494 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.8■■□□□ 1.08
ITGB1-215ENST00000488494 FAM151AQ8WW52 585 aa21.8■■□□□ 1.08
ITGB1-215ENST00000488494 OPTNQ96CV9 577 aa21.8■■□□□ 1.08
ITGB1-215ENST00000488494 HOOK2Q96ED9 719 aa21.8■■□□□ 1.08
ITGB1-215ENST00000488494 ZBTB40Q9NUA8 1239 aa21.8■■□□□ 1.08
ITGB1-215ENST00000488494 FAM198AQ9UFP1 575 aa21.8■■□□□ 1.08
ITGB1-215ENST00000488494 DBNLQ9UJU6 430 aaKnown RBP21.8■■□□□ 1.08
ITGB1-215ENST00000488494 DOCK2Q92608 1830 aa21.8■■□□□ 1.08
ITGB1-215ENST00000488494 MANSC4A6NHS7 340 aaPredicted RBP21.79■■□□□ 1.08
ITGB1-215ENST00000488494 BTDP43251 543 aa21.79■■□□□ 1.08
ITGB1-215ENST00000488494 CCDC158Q5M9N0 1113 aa21.79■■□□□ 1.08
ITGB1-215ENST00000488494 ZNF384Q8TF68 577 aa21.79■■□□□ 1.08
ITGB1-215ENST00000488494 WRNIP1Q96S55 665 aa21.79■■□□□ 1.08
ITGB1-215ENST00000488494 SNRKQ9NRH2 765 aa21.79■■□□□ 1.08
ITGB1-215ENST00000488494 CSADQ9Y600 493 aa21.79■■□□□ 1.08
ITGB1-215ENST00000488494 MAP3K9P80192 1104 aa21.78■■□□□ 1.08
ITGB1-215ENST00000488494 DCAF15Q66K64 600 aa21.78■■□□□ 1.08
ITGB1-215ENST00000488494 ERC1Q8IUD2 1116 aa21.78■■□□□ 1.08
ITGB1-215ENST00000488494 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.78■■□□□ 1.08
ITGB1-215ENST00000488494 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
ITGB1-215ENST00000488494 RAI14Q9P0K7 980 aa21.78■■□□□ 1.08
ITGB1-215ENST00000488494 TBC1D8O95759 1140 aa21.77■■□□□ 1.08
ITGB1-215ENST00000488494 RGS3P49796 1198 aa21.77■■□□□ 1.08
ITGB1-215ENST00000488494 GSTO1P78417 241 aa21.77■■□□□ 1.08
ITGB1-215ENST00000488494 NSUN4Q96CB9 384 aaKnown RBP21.77■■□□□ 1.08
ITGB1-215ENST00000488494 EAF2Q96CJ1 260 aaPredicted RBP21.77■■□□□ 1.08
ITGB1-215ENST00000488494 FAM163AQ96GL9 167 aaPredicted RBP21.77■■□□□ 1.08
ITGB1-215ENST00000488494 CCDC8Q9H0W5 538 aaPredicted RBP21.77■■□□□ 1.08
ITGB1-215ENST00000488494 PDE3AQ14432 1141 aa21.76■■□□□ 1.07
ITGB1-215ENST00000488494 MIGA2Q7L4E1 593 aa21.76■■□□□ 1.07
ITGB1-215ENST00000488494 ZFPM1Q8IX07 1006 aa21.76■■□□□ 1.07
ITGB1-215ENST00000488494 OTUD5Q96G74 571 aa21.76■■□□□ 1.07
ITGB1-215ENST00000488494 ABHD8Q96I13 439 aa21.76■■□□□ 1.07
ITGB1-215ENST00000488494 ZNF341Q9BYN7 854 aa21.76■■□□□ 1.07
ITGB1-215ENST00000488494 LRP2BPQ9P2M1 347 aa21.76■■□□□ 1.07
ITGB1-215ENST00000488494 SNCAIPQ9Y6H5 919 aa21.76■■□□□ 1.07
ITGB1-215ENST00000488494 IGF2BP3O00425 579 aaKnown RBP eCLIP21.75■■□□□ 1.07
ITGB1-215ENST00000488494 HMMRO75330 724 aa21.75■■□□□ 1.07
ITGB1-215ENST00000488494 WDHD1O75717 1129 aaPredicted RBP21.75■■□□□ 1.07
ITGB1-215ENST00000488494 DGKZQ13574 1117 aa21.75■■□□□ 1.07
ITGB1-215ENST00000488494 HSP90AB4PQ58FF6 505 aa21.75■■□□□ 1.07
ITGB1-215ENST00000488494 AACSQ86V21 672 aa21.75■■□□□ 1.07
ITGB1-215ENST00000488494 IFNL1Q8IU54 200 aa21.75■■□□□ 1.07
ITGB1-215ENST00000488494 SIRT2Q8IXJ6 389 aa21.75■■□□□ 1.07
ITGB1-215ENST00000488494 RPAP2Q8IXW5 612 aaPredicted RBP21.75■■□□□ 1.07
ITGB1-215ENST00000488494 ZKSCAN4Q969J2 545 aaPredicted RBP21.75■■□□□ 1.07
ITGB1-215ENST00000488494 ZNF512BQ96KM6 892 aaPredicted RBP21.75■■□□□ 1.07
ITGB1-215ENST00000488494 IDI2Q9BXS1 227 aa21.75■■□□□ 1.07
ITGB1-215ENST00000488494 CHMP4BQ9H444 224 aaKnown RBP21.75■■□□□ 1.07
ITGB1-215ENST00000488494 IL1RAPL2Q9NP60 686 aa21.75■■□□□ 1.07
ITGB1-215ENST00000488494 ATRNL1Q5VV63 1379 aa21.74■■□□□ 1.07
ITGB1-215ENST00000488494 GPR75-ASB3A0A0A6YYF3 556 aa21.74■■□□□ 1.07
ITGB1-215ENST00000488494 APBB1O00213 710 aa21.74■■□□□ 1.07
ITGB1-215ENST00000488494 ENTPD3O75355 529 aa21.74■■□□□ 1.07
ITGB1-215ENST00000488494 PICALMQ13492 652 aa21.74■■□□□ 1.07
ITGB1-215ENST00000488494 MCOLN1Q9GZU1 580 aa21.74■■□□□ 1.07
ITGB1-215ENST00000488494 DDX4Q9NQI0 724 aaKnown RBP21.74■■□□□ 1.07
ITGB1-215ENST00000488494 SPDYE5A6NIY4 337 aa21.73■■□□□ 1.07
ITGB1-215ENST00000488494 ALDH1A1P00352 501 aa21.73■■□□□ 1.07
ITGB1-215ENST00000488494 CYP2E1P05181 493 aaPredicted RBP21.73■■□□□ 1.07
ITGB1-215ENST00000488494 ZAP70P43403 619 aa21.73■■□□□ 1.07
ITGB1-215ENST00000488494 INHBEP58166 350 aa21.73■■□□□ 1.07
ITGB1-215ENST00000488494 RHBDL3P58872 404 aa21.73■■□□□ 1.07
ITGB1-215ENST00000488494 RHPN1Q8TCX5 695 aa21.73■■□□□ 1.07
ITGB1-215ENST00000488494 AK9Q5TCS8 1911 aa21.72■■□□□ 1.07
ITGB1-215ENST00000488494 LDHCP07864 332 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms