RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ZMYND8Q9ULU4 1186 aaPredicted RBP11.8□□□□□ -0.52
COL17A1-207ENST00000488320 ADAMTS8Q9UP79 889 aa11.8□□□□□ -0.52
COL17A1-207ENST00000488320 MGAMO43451 1857 aa11.8□□□□□ -0.52
COL17A1-207ENST00000488320 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
COL17A1-207ENST00000488320 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 INHAP05111 366 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 ELNP15502 786 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 GYG1P46976 350 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 FLT3LGP49771 235 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 BCAMP50895 628 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
COL17A1-207ENST00000488320 CCDC57Q2TAC2 916 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 G2E3Q7L622 706 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 VPS37DQ86XT2 251 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 TEKT1Q969V4 418 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 ZNF594Q96JF6 807 aaPredicted RBP11.79□□□□□ -0.52
COL17A1-207ENST00000488320 GDF15Q99988 308 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 MTMR10Q9NXD2 777 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 AK9Q5TCS8 1911 aa11.79□□□□□ -0.52
COL17A1-207ENST00000488320 CYP2C8P10632 490 aa11.78□□□□□ -0.52
COL17A1-207ENST00000488320 SYN1P17600 705 aa11.78□□□□□ -0.52
COL17A1-207ENST00000488320 INPP5BP32019 993 aa11.78□□□□□ -0.52
COL17A1-207ENST00000488320 CASP7P55210 303 aa11.78□□□□□ -0.52
COL17A1-207ENST00000488320 LRIT3Q3SXY7 679 aa11.78□□□□□ -0.52
COL17A1-207ENST00000488320 FAM83AQ86UY5 434 aa11.78□□□□□ -0.52
COL17A1-207ENST00000488320 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL17A1-207ENST00000488320 TSPYL6Q8N831 410 aa11.78□□□□□ -0.52
COL17A1-207ENST00000488320 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
COL17A1-207ENST00000488320 LAMA3Q16787 3333 aa11.78□□□□□ -0.52
COL17A1-207ENST00000488320 APAF1O14727 1248 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 TNPO2O14787 897 aaKnown RBP11.77□□□□□ -0.53
COL17A1-207ENST00000488320 BCRP11274 1271 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 HDLBPQ00341 1268 aaKnown RBP11.77□□□□□ -0.53
COL17A1-207ENST00000488320 UBE4AQ14139 1066 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 GRIK5Q16478 980 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 TDHQ8IZJ6 230 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 LINS1Q8NG48 757 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 PXYLP1Q8TE99 480 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 DNAAF4Q8WXU2 420 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 FAM84BQ96KN1 310 aaPredicted RBP11.77□□□□□ -0.53
COL17A1-207ENST00000488320 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.53
COL17A1-207ENST00000488320 RNF39Q9H2S5 420 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 IQSEC3Q9UPP2 1182 aaPredicted RBP11.77□□□□□ -0.53
COL17A1-207ENST00000488320 ADGRA2Q96PE1 1338 aa11.77□□□□□ -0.53
COL17A1-207ENST00000488320 MAGEA10P43363 369 aaPredicted RBP11.76□□□□□ -0.53
COL17A1-207ENST00000488320 FOXO4P98177 505 aa11.76□□□□□ -0.53
COL17A1-207ENST00000488320 FKBP5Q13451 457 aaPredicted RBP11.76□□□□□ -0.53
COL17A1-207ENST00000488320 DIS3LQ8TF46 1054 aaKnown RBP11.76□□□□□ -0.53
COL17A1-207ENST00000488320 TBC1D22AQ8WUA7 517 aa11.76□□□□□ -0.53
COL17A1-207ENST00000488320 KCNH4Q9UQ05 1017 aa11.76□□□□□ -0.53
COL17A1-207ENST00000488320 A0A1B0GUL6 1792 aa11.76□□□□□ -0.53
COL17A1-207ENST00000488320 ALPK3Q96L96 1907 aa11.76□□□□□ -0.53
COL17A1-207ENST00000488320 CXCL11O14625 94 aa11.75□□□□□ -0.53
COL17A1-207ENST00000488320 FKBP1CQ5VVH2 108 aa11.75□□□□□ -0.53
COL17A1-207ENST00000488320 GADL1Q6ZQY3 521 aa11.75□□□□□ -0.53
COL17A1-207ENST00000488320 FASTKD5Q7L8L6 764 aaKnown RBP11.75□□□□□ -0.53
COL17A1-207ENST00000488320 COA7Q96BR5 231 aa11.75□□□□□ -0.53
COL17A1-207ENST00000488320 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
COL17A1-207ENST00000488320 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
COL17A1-207ENST00000488320 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
COL17A1-207ENST00000488320 PAK6Q9NQU5 681 aaPredicted RBP11.75□□□□□ -0.53
COL17A1-207ENST00000488320 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
COL17A1-207ENST00000488320 TCP10Q12799 353 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 FLIIQ13045 1269 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 IRF5Q13568 498 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 MOGSQ13724 837 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 CAVIN4Q5BKX8 364 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 GPAT2Q6NUI2 795 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 ANKLE1Q8NAG6 615 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 SMCR8Q8TEV9 937 aaPredicted RBP11.74□□□□□ -0.53
COL17A1-207ENST00000488320 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL17A1-207ENST00000488320 C11orf49Q9H6J7 331 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 UNC80Q8N2C7 3258 aa11.74□□□□□ -0.53
COL17A1-207ENST00000488320 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
COL17A1-207ENST00000488320 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
COL17A1-207ENST00000488320 RPTORQ8N122 1335 aa11.73□□□□□ -0.53
COL17A1-207ENST00000488320 TSR2Q969E8 191 aaKnown RBP11.73□□□□□ -0.53
COL17A1-207ENST00000488320 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
COL17A1-207ENST00000488320 ZNF112Q9UJU3 913 aa11.73□□□□□ -0.53
COL17A1-207ENST00000488320 MAST3O60307 1309 aa11.72□□□□□ -0.53
COL17A1-207ENST00000488320 NOL9Q5SY16 702 aaKnown RBP11.72□□□□□ -0.53
COL17A1-207ENST00000488320 FBXO33Q7Z6M2 555 aa11.72□□□□□ -0.53
COL17A1-207ENST00000488320 FAM161BQ96MY7 647 aa11.72□□□□□ -0.53
COL17A1-207ENST00000488320 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
COL17A1-207ENST00000488320 ZHX2Q9Y6X8 837 aa11.72□□□□□ -0.53
COL17A1-207ENST00000488320 DOCK3Q8IZD9 2030 aa11.72□□□□□ -0.53
COL17A1-207ENST00000488320 ZEB1P37275 1124 aaPredicted RBP11.71□□□□□ -0.53
COL17A1-207ENST00000488320 EPHA10Q5JZY3 1008 aa11.71□□□□□ -0.53
COL17A1-207ENST00000488320 HHIPL2Q6UWX4 724 aa11.71□□□□□ -0.53
COL17A1-207ENST00000488320 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.53
COL17A1-207ENST00000488320 PRDM6Q9NQX0 595 aa11.71□□□□□ -0.53
COL17A1-207ENST00000488320 C9orf78Q9NZ63 289 aaPredicted RBP11.71□□□□□ -0.53
COL17A1-207ENST00000488320 RPAP1Q9BWH6 1393 aaPredicted RBP11.7□□□□□ -0.54
COL17A1-207ENST00000488320 MROH5Q6ZUA9 1318 aa11.7□□□□□ -0.54
COL17A1-207ENST00000488320 A0A0G2JLL6 359 aaPredicted RBP11.7□□□□□ -0.54
COL17A1-207ENST00000488320 PRRT2Q7Z6L0 340 aaPredicted RBP11.7□□□□□ -0.54
COL17A1-207ENST00000488320 ANKRD13CQ8N6S4 541 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms