RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 HPS5Q9UPZ3 1129 aa27.99■■■□□ 2.07
PTPN4-211ENST00000488279 A0A1B0GUL7 405 aa27.98■■■□□ 2.07
PTPN4-211ENST00000488279 DCAF15Q66K64 600 aa27.98■■■□□ 2.07
PTPN4-211ENST00000488279 FAM151AQ8WW52 585 aa27.98■■■□□ 2.07
PTPN4-211ENST00000488279 CNKSR2Q8WXI2 1034 aa27.98■■■□□ 2.07
PTPN4-211ENST00000488279 XAGE2Q96GT9 111 aa27.98■■■□□ 2.07
PTPN4-211ENST00000488279 MS4A4AQ96JQ5 239 aa27.98■■■□□ 2.07
PTPN4-211ENST00000488279 GTF2A2P52657 109 aa27.97■■■□□ 2.07
PTPN4-211ENST00000488279 WRNIP1Q96S55 665 aa27.97■■■□□ 2.07
PTPN4-211ENST00000488279 USP40Q9NVE5 1235 aa27.97■■■□□ 2.07
PTPN4-211ENST00000488279 TCP10Q12799 353 aa27.96■■■□□ 2.07
PTPN4-211ENST00000488279 MVPQ14764 893 aaKnown RBP27.96■■■□□ 2.07
PTPN4-211ENST00000488279 FBXO46Q6PJ61 603 aaPredicted RBP27.96■■■□□ 2.07
PTPN4-211ENST00000488279 TMEM57Q8N5G2 664 aa27.96■■■□□ 2.07
PTPN4-211ENST00000488279 OTUD5Q96G74 571 aa27.96■■■□□ 2.07
PTPN4-211ENST00000488279 NEUROD6Q96NK8 337 aa27.96■■■□□ 2.07
PTPN4-211ENST00000488279 G3BP1Q13283 466 aaKnown RBP eCLIP27.95■■■□□ 2.06
PTPN4-211ENST00000488279 CRHR2Q13324 411 aa27.95■■■□□ 2.06
PTPN4-211ENST00000488279 RASGRF1Q13972 1273 aa27.95■■■□□ 2.06
PTPN4-211ENST00000488279 MIGA2Q7L4E1 593 aa27.95■■■□□ 2.06
PTPN4-211ENST00000488279 ZKSCAN4Q969J2 545 aaPredicted RBP27.95■■■□□ 2.06
PTPN4-211ENST00000488279 RPAP1Q9BWH6 1393 aaPredicted RBP27.95■■■□□ 2.06
PTPN4-211ENST00000488279 PDS5AQ29RF7 1337 aaKnown RBP27.94■■■□□ 2.06
PTPN4-211ENST00000488279 SPDYE5A6NIY4 337 aa27.94■■■□□ 2.06
PTPN4-211ENST00000488279 SPTY2D1Q68D10 685 aaPredicted RBP27.94■■■□□ 2.06
PTPN4-211ENST00000488279 ERO1BQ86YB8 467 aa27.94■■■□□ 2.06
PTPN4-211ENST00000488279 ZNF341Q9BYN7 854 aa27.94■■■□□ 2.06
PTPN4-211ENST00000488279 ABCF2Q9UG63 623 aa27.94■■■□□ 2.06
PTPN4-211ENST00000488279 CCL15-CCL14A0A0B4J2E2 113 aa27.93■■■□□ 2.06
PTPN4-211ENST00000488279 PNMA6EA0A0J9YXQ4 647 aa27.93■■■□□ 2.06
PTPN4-211ENST00000488279 SOX10P56693 466 aa27.93■■■□□ 2.06
PTPN4-211ENST00000488279 NFIAQ12857 509 aa27.93■■■□□ 2.06
PTPN4-211ENST00000488279 CCL15Q16663 113 aa27.93■■■□□ 2.06
PTPN4-211ENST00000488279 DZIP1Q86YF9 867 aaKnown RBP27.93■■■□□ 2.06
PTPN4-211ENST00000488279 SLF2Q8IX21 1173 aa27.93■■■□□ 2.06
PTPN4-211ENST00000488279 BRI3BPQ8WY22 251 aa27.93■■■□□ 2.06
PTPN4-211ENST00000488279 SNCAIPQ9Y6H5 919 aa27.93■■■□□ 2.06
PTPN4-211ENST00000488279 GORABQ5T7V8 394 aa27.92■■■□□ 2.06
PTPN4-211ENST00000488279 ERO1AQ96HE7 468 aa27.91■■■□□ 2.06
PTPN4-211ENST00000488279 FAM198AQ9UFP1 575 aa27.91■■■□□ 2.06
PTPN4-211ENST00000488279 TRIM17Q9Y577 477 aa27.91■■■□□ 2.06
PTPN4-211ENST00000488279 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.91■■■□□ 2.06
PTPN4-211ENST00000488279 MYH13Q9UKX3 1938 aa27.9■■■□□ 2.06
PTPN4-211ENST00000488279 FTSJ3Q8IY81 847 aaKnown RBP27.9■■■□□ 2.06
PTPN4-211ENST00000488279 FAM163AQ96GL9 167 aaPredicted RBP27.9■■■□□ 2.06
PTPN4-211ENST00000488279 CETPP11597 493 aa27.89■■■□□ 2.06
PTPN4-211ENST00000488279 SP3Q02447 781 aa27.89■■■□□ 2.06
PTPN4-211ENST00000488279 ZFYVE28Q9HCC9 887 aa27.89■■■□□ 2.06
PTPN4-211ENST00000488279 OTOFQ9HC10 1997 aa27.89■■■□□ 2.06
PTPN4-211ENST00000488279 GAKO14976 1311 aa27.89■■■□□ 2.05
PTPN4-211ENST00000488279 IRF6O14896 467 aa27.88■■■□□ 2.05
PTPN4-211ENST00000488279 PPIL2Q13356 520 aa27.88■■■□□ 2.05
PTPN4-211ENST00000488279 SNAPC2Q13487 334 aa27.88■■■□□ 2.05
PTPN4-211ENST00000488279 ERICH6Q7L0X2 663 aa27.88■■■□□ 2.05
PTPN4-211ENST00000488279 OTOP1Q7RTM1 612 aa27.88■■■□□ 2.05
PTPN4-211ENST00000488279 IDI2Q9BXS1 227 aa27.88■■■□□ 2.05
PTPN4-211ENST00000488279 ZNF112Q9UJU3 913 aa27.88■■■□□ 2.05
PTPN4-211ENST00000488279 WDHD1O75717 1129 aaPredicted RBP27.87■■■□□ 2.05
PTPN4-211ENST00000488279 INPP5BP32019 993 aa27.87■■■□□ 2.05
PTPN4-211ENST00000488279 PPATQ06203 517 aa27.87■■■□□ 2.05
PTPN4-211ENST00000488279 TAF1CQ15572 869 aaPredicted RBP27.87■■■□□ 2.05
PTPN4-211ENST00000488279 ZFPM1Q8IX07 1006 aa27.87■■■□□ 2.05
PTPN4-211ENST00000488279 FAM43AQ8N2R8 423 aa27.87■■■□□ 2.05
PTPN4-211ENST00000488279 LAMB1P07942 1786 aa27.86■■■□□ 2.05
PTPN4-211ENST00000488279 ENTPD3O75355 529 aa27.86■■■□□ 2.05
PTPN4-211ENST00000488279 RGS3P49796 1198 aa27.86■■■□□ 2.05
PTPN4-211ENST00000488279 SPATA5Q8NB90 893 aa27.86■■■□□ 2.05
PTPN4-211ENST00000488279 CD99L2Q8TCZ2 262 aa27.86■■■□□ 2.05
PTPN4-211ENST00000488279 HMG20BQ9P0W2 317 aa27.86■■■□□ 2.05
PTPN4-211ENST00000488279 ATP8B2P98198 1209 aa27.85■■■□□ 2.05
PTPN4-211ENST00000488279 MECOMQ03112 1051 aa27.85■■■□□ 2.05
PTPN4-211ENST00000488279 POLA2Q14181 598 aa27.85■■■□□ 2.05
PTPN4-211ENST00000488279 BTDP43251 543 aa27.84■■■□□ 2.05
PTPN4-211ENST00000488279 ITPRIPQ8IWB1 547 aa27.84■■■□□ 2.05
PTPN4-211ENST00000488279 SSH3Q8TE77 659 aa27.84■■■□□ 2.05
PTPN4-211ENST00000488279 EFCC1Q9HA90 598 aa27.84■■■□□ 2.05
PTPN4-211ENST00000488279 ZCCHC17Q9NP64 241 aaKnown RBP27.84■■■□□ 2.05
PTPN4-211ENST00000488279 TNRC18O15417 2968 aaPredicted RBP27.84■■■□□ 2.05
PTPN4-211ENST00000488279 HTTP42858 3142 aa27.83■■■□□ 2.05
PTPN4-211ENST00000488279 UQCRFS1P1P0C7P4 283 aa27.83■■■□□ 2.05
PTPN4-211ENST00000488279 ARID4AP29374 1257 aaPredicted RBP27.83■■■□□ 2.05
PTPN4-211ENST00000488279 OS9Q13438 667 aaPredicted RBP27.83■■■□□ 2.05
PTPN4-211ENST00000488279 ZSCAN29Q8IWY8 852 aaPredicted RBP27.83■■■□□ 2.05
PTPN4-211ENST00000488279 MROH7-TTC4A0A0A0MT08 1334 aa27.83■■■□□ 2.05
PTPN4-211ENST00000488279 ZBED9Q6R2W3 1325 aa27.83■■■□□ 2.05
PTPN4-211ENST00000488279 BTBD19C9JJ37 291 aa27.82■■■□□ 2.04
PTPN4-211ENST00000488279 ZBTB7BO15156 539 aaPredicted RBP27.82■■■□□ 2.04
PTPN4-211ENST00000488279 LDHCP07864 332 aa27.82■■■□□ 2.04
PTPN4-211ENST00000488279 GSTO1P78417 241 aa27.82■■■□□ 2.04
PTPN4-211ENST00000488279 ARHGEF6Q15052 776 aa27.82■■■□□ 2.04
PTPN4-211ENST00000488279 PI16Q6UXB8 463 aa27.82■■■□□ 2.04
PTPN4-211ENST00000488279 TBC1D9Q6ZT07 1266 aa27.82■■■□□ 2.04
PTPN4-211ENST00000488279 GPR108Q9NPR9 543 aa27.82■■■□□ 2.04
PTPN4-211ENST00000488279 GPR75-ASB3A0A0A6YYF3 556 aa27.81■■■□□ 2.04
PTPN4-211ENST00000488279 SURF6O75683 361 aaKnown RBP27.81■■■□□ 2.04
PTPN4-211ENST00000488279 NOL9Q5SY16 702 aaKnown RBP27.81■■■□□ 2.04
PTPN4-211ENST00000488279 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.81■■■□□ 2.04
PTPN4-211ENST00000488279 C1orf115Q9H7X2 142 aa27.81■■■□□ 2.04
PTPN4-211ENST00000488279 PTPN22Q9Y2R2 807 aa27.81■■■□□ 2.04
PTPN4-211ENST00000488279 RLBP1P12271 317 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms