RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 TTLL12Q14166 644 aaPredicted RBP20.9■□□□□ 0.94
HMG20B-212ENST00000487894 TBC1D9Q6ZT07 1266 aa20.9■□□□□ 0.94
HMG20B-212ENST00000487894 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
HMG20B-212ENST00000487894 TMEM39BQ9GZU3 492 aa20.9■□□□□ 0.94
HMG20B-212ENST00000487894 SNRKQ9NRH2 765 aa20.9■□□□□ 0.94
HMG20B-212ENST00000487894 TMOD2Q9NZR1 351 aa20.9■□□□□ 0.94
HMG20B-212ENST00000487894 RFX7Q2KHR2 1363 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 RPAP1Q9BWH6 1393 aaPredicted RBP20.89■□□□□ 0.93
HMG20B-212ENST00000487894 MROH7-TTC4A0A0A0MT08 1334 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 MYH7P12883 1935 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 RAB11FIP3O75154 756 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 MAP2K2P36507 400 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 MECOMQ03112 1051 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 FKBP1CQ5VVH2 108 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 CDC42EP5Q6NZY7 148 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 RASAL3Q86YV0 1011 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 CRBNQ96SW2 442 aa20.89■□□□□ 0.93
HMG20B-212ENST00000487894 NOGQ13253 232 aa20.88■□□□□ 0.93
HMG20B-212ENST00000487894 SUPT20HL1Q3ZLR7 823 aa20.88■□□□□ 0.93
HMG20B-212ENST00000487894 ARMC9Q7Z3E5 817 aa20.88■□□□□ 0.93
HMG20B-212ENST00000487894 FAM83AQ86UY5 434 aa20.88■□□□□ 0.93
HMG20B-212ENST00000487894 FAM163AQ96GL9 167 aaPredicted RBP20.88■□□□□ 0.93
HMG20B-212ENST00000487894 ZIC5Q96T25 663 aa20.88■□□□□ 0.93
HMG20B-212ENST00000487894 WBP1LQ9NX94 342 aa20.88■□□□□ 0.93
HMG20B-212ENST00000487894 ANGEL1Q9UNK9 670 aaKnown RBP20.88■□□□□ 0.93
HMG20B-212ENST00000487894 CYP2E1P05181 493 aaPredicted RBP20.87■□□□□ 0.93
HMG20B-212ENST00000487894 ZAP70P43403 619 aa20.87■□□□□ 0.93
HMG20B-212ENST00000487894 MAP3K11Q16584 847 aa20.87■□□□□ 0.93
HMG20B-212ENST00000487894 SLF2Q8IX21 1173 aa20.87■□□□□ 0.93
HMG20B-212ENST00000487894 CLASRPQ8N2M8 674 aaKnown RBP20.87■□□□□ 0.93
HMG20B-212ENST00000487894 CCDC102AQ96A19 550 aa20.87■□□□□ 0.93
HMG20B-212ENST00000487894 NSUN4Q96CB9 384 aaKnown RBP20.87■□□□□ 0.93
HMG20B-212ENST00000487894 MAP2K1Q02750 393 aaPredicted RBP20.86■□□□□ 0.93
HMG20B-212ENST00000487894 LDLRAD1Q5T700 205 aa20.86■□□□□ 0.93
HMG20B-212ENST00000487894 RAI14Q9P0K7 980 aa20.86■□□□□ 0.93
HMG20B-212ENST00000487894 PCDHB15Q9Y5E8 787 aa20.86■□□□□ 0.93
HMG20B-212ENST00000487894 FOXN1O15353 648 aa20.85■□□□□ 0.93
HMG20B-212ENST00000487894 PPP1R12BO60237 982 aaPredicted RBP20.85■□□□□ 0.93
HMG20B-212ENST00000487894 BTDP43251 543 aa20.85■□□□□ 0.93
HMG20B-212ENST00000487894 NFIAQ12857 509 aa20.85■□□□□ 0.93
HMG20B-212ENST00000487894 USP40Q9NVE5 1235 aa20.85■□□□□ 0.93
HMG20B-212ENST00000487894 LRP2BPQ9P2M1 347 aa20.85■□□□□ 0.93
HMG20B-212ENST00000487894 PIH1D3Q9NQM4 214 aaKnown RBP20.84■□□□□ 0.93
HMG20B-212ENST00000487894 FAM198AQ9UFP1 575 aa20.84■□□□□ 0.93
HMG20B-212ENST00000487894 NDUFB9Q9Y6M9 179 aa20.84■□□□□ 0.93
HMG20B-212ENST00000487894 GPR75-ASB3A0A0A6YYF3 556 aa20.83■□□□□ 0.93
HMG20B-212ENST00000487894 USP2O75604 605 aaPredicted RBP20.83■□□□□ 0.93
HMG20B-212ENST00000487894 IFIT2P09913 472 aaKnown RBP20.83■□□□□ 0.93
HMG20B-212ENST00000487894 GSTO1P78417 241 aa20.83■□□□□ 0.93
HMG20B-212ENST00000487894 FAM151AQ8WW52 585 aa20.83■□□□□ 0.93
HMG20B-212ENST00000487894 LRRCC1Q9C099 1032 aa20.83■□□□□ 0.93
HMG20B-212ENST00000487894 DCTPP1Q9H773 170 aa20.83■□□□□ 0.93
HMG20B-212ENST00000487894 SIPA1L1O43166 1804 aa20.83■□□□□ 0.92
HMG20B-212ENST00000487894 KIF23Q02241 960 aaPredicted RBP20.82■□□□□ 0.92
HMG20B-212ENST00000487894 AIDAQ96BJ3 306 aa20.82■□□□□ 0.92
HMG20B-212ENST00000487894 IDI2Q9BXS1 227 aa20.82■□□□□ 0.92
HMG20B-212ENST00000487894 SMARCA5O60264 1052 aaPredicted RBP20.81■□□□□ 0.92
HMG20B-212ENST00000487894 LDHCP07864 332 aa20.81■□□□□ 0.92
HMG20B-212ENST00000487894 IREB2P48200 963 aaKnown RBP20.81■□□□□ 0.92
HMG20B-212ENST00000487894 RHBDL3P58872 404 aa20.81■□□□□ 0.92
HMG20B-212ENST00000487894 TCP10Q12799 353 aa20.81■□□□□ 0.92
HMG20B-212ENST00000487894 CLMNQ96JQ2 1002 aa20.81■□□□□ 0.92
HMG20B-212ENST00000487894 BCL11AQ9H165 835 aa20.81■□□□□ 0.92
HMG20B-212ENST00000487894 ANTXR1Q9H6X2 564 aa20.81■□□□□ 0.92
HMG20B-212ENST00000487894 MYH1P12882 1939 aa20.8■□□□□ 0.92
HMG20B-212ENST00000487894 UNCXA6NJT0 531 aa20.8■□□□□ 0.92
HMG20B-212ENST00000487894 IGSF3O75054 1194 aa20.8■□□□□ 0.92
HMG20B-212ENST00000487894 WDHD1O75717 1129 aaPredicted RBP20.8■□□□□ 0.92
HMG20B-212ENST00000487894 RGS3P49796 1198 aa20.8■□□□□ 0.92
HMG20B-212ENST00000487894 NAA16Q6N069 864 aaPredicted RBP20.8■□□□□ 0.92
HMG20B-212ENST00000487894 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.8■□□□□ 0.92
HMG20B-212ENST00000487894 DDX4Q9NQI0 724 aaKnown RBP20.8■□□□□ 0.92
HMG20B-212ENST00000487894 ATAD5Q96QE3 1844 aa20.8■□□□□ 0.92
HMG20B-212ENST00000487894 DOCK1Q14185 1865 aa20.79■□□□□ 0.92
HMG20B-212ENST00000487894 ADGRA1Q86SQ6 560 aa20.79■□□□□ 0.92
HMG20B-212ENST00000487894 ZFPM1Q8IX07 1006 aa20.79■□□□□ 0.92
HMG20B-212ENST00000487894 ANKRD13AQ8IZ07 590 aa20.79■□□□□ 0.92
HMG20B-212ENST00000487894 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.79■□□□□ 0.921e-6■□□□□ 10.5
HMG20B-212ENST00000487894 NAV1Q8NEY1 1877 aa20.79■□□□□ 0.92
HMG20B-212ENST00000487894 DDX60LQ5H9U9 1706 aaKnown RBP20.78■□□□□ 0.92
HMG20B-212ENST00000487894 COL2A1P02458 1487 aaPredicted RBP20.78■□□□□ 0.92
HMG20B-212ENST00000487894 ATRNL1Q5VV63 1379 aa20.78■□□□□ 0.92
HMG20B-212ENST00000487894 ENTPD3O75355 529 aa20.78■□□□□ 0.92
HMG20B-212ENST00000487894 HSPA8P11142 646 aaKnown RBP20.78■□□□□ 0.92
HMG20B-212ENST00000487894 CTCFP49711 727 aaPredicted RBP20.78■□□□□ 0.92
HMG20B-212ENST00000487894 HOOK2Q96ED9 719 aa20.78■□□□□ 0.92
HMG20B-212ENST00000487894 BEGAINQ9BUH8 593 aa20.78■□□□□ 0.92
HMG20B-212ENST00000487894 IDH1O75874 414 aaKnown RBP20.77■□□□□ 0.92
HMG20B-212ENST00000487894 MAP4K4O95819 1239 aaPredicted RBP20.77■□□□□ 0.92
HMG20B-212ENST00000487894 MKRN3Q13064 507 aaKnown RBP20.77■□□□□ 0.92
HMG20B-212ENST00000487894 PICALMQ13492 652 aa20.77■□□□□ 0.92
HMG20B-212ENST00000487894 SPRYD7Q5W111 196 aa20.77■□□□□ 0.92
HMG20B-212ENST00000487894 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.77■□□□□ 0.92
HMG20B-212ENST00000487894 WNK4Q96J92 1243 aa20.77■□□□□ 0.92
HMG20B-212ENST00000487894 CSRNP1Q96S65 589 aa20.77■□□□□ 0.92
HMG20B-212ENST00000487894 CASP8AP2Q9UKL3 1982 aa20.76■□□□□ 0.91
HMG20B-212ENST00000487894 COL13A1Q5TAT6 717 aaPredicted RBP20.76■□□□□ 0.91
HMG20B-212ENST00000487894 DCAF15Q66K64 600 aa20.76■□□□□ 0.91
HMG20B-212ENST00000487894 SH3BP5LQ7L8J4 393 aa20.76■□□□□ 0.91
HMG20B-212ENST00000487894 SLC10A4Q96EP9 437 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms