RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SPRYD7Q5W111 196 aa25.13■■□□□ 1.61
HDAC4-209ENST00000487617 PI16Q6UXB8 463 aa25.13■■□□□ 1.61
HDAC4-209ENST00000487617 ERICH6Q7L0X2 663 aa25.13■■□□□ 1.61
HDAC4-209ENST00000487617 DBNDD2Q9BQY9 259 aa25.13■■□□□ 1.61
HDAC4-209ENST00000487617 CHMP4BQ9H444 224 aaKnown RBP25.13■■□□□ 1.61
HDAC4-209ENST00000487617 ZBTB40Q9NUA8 1239 aa25.13■■□□□ 1.61
HDAC4-209ENST00000487617 CCDC158Q5M9N0 1113 aa25.12■■□□□ 1.61
HDAC4-209ENST00000487617 TTC39AQ5SRH9 613 aa25.12■■□□□ 1.61
HDAC4-209ENST00000487617 SLF2Q8IX21 1173 aa25.12■■□□□ 1.61
HDAC4-209ENST00000487617 ANKRD13AQ8IZ07 590 aa25.12■■□□□ 1.61
HDAC4-209ENST00000487617 USP40Q9NVE5 1235 aa25.12■■□□□ 1.61
HDAC4-209ENST00000487617 EXOC6BQ9Y2D4 811 aa25.12■■□□□ 1.61
HDAC4-209ENST00000487617 MCAMP43121 646 aa25.11■■□□□ 1.61
HDAC4-209ENST00000487617 PDE3AQ14432 1141 aa25.11■■□□□ 1.61
HDAC4-209ENST00000487617 C20orf194Q5TEA3 1177 aa25.11■■□□□ 1.61
HDAC4-209ENST00000487617 GAKO14976 1311 aa25.11■■□□□ 1.61
HDAC4-209ENST00000487617 TCP10Q12799 353 aa25.1■■□□□ 1.61
HDAC4-209ENST00000487617 TBC1D9Q6ZT07 1266 aa25.1■■□□□ 1.61
HDAC4-209ENST00000487617 ERC1Q8IUD2 1116 aa25.1■■□□□ 1.61
HDAC4-209ENST00000487617 RPAP2Q8IXW5 612 aaPredicted RBP25.1■■□□□ 1.61
HDAC4-209ENST00000487617 WNK4Q96J92 1243 aa25.1■■□□□ 1.61
HDAC4-209ENST00000487617 TM4SF4P48230 202 aa25.09■■□□□ 1.61
HDAC4-209ENST00000487617 MECOMQ03112 1051 aa25.09■■□□□ 1.61
HDAC4-209ENST00000487617 SREBF2Q12772 1141 aa25.09■■□□□ 1.61
HDAC4-209ENST00000487617 HSP90AB4PQ58FF6 505 aa25.09■■□□□ 1.61
HDAC4-209ENST00000487617 FAM151AQ8WW52 585 aa25.09■■□□□ 1.61
HDAC4-209ENST00000487617 HOOK2Q96ED9 719 aa25.09■■□□□ 1.61
HDAC4-209ENST00000487617 HMMRO75330 724 aa25.08■■□□□ 1.61
HDAC4-209ENST00000487617 NFIAQ12857 509 aa25.08■■□□□ 1.61
HDAC4-209ENST00000487617 EAF2Q96CJ1 260 aaPredicted RBP25.08■■□□□ 1.61
HDAC4-209ENST00000487617 FAM163AQ96GL9 167 aaPredicted RBP25.08■■□□□ 1.61
HDAC4-209ENST00000487617 CCDC8Q9H0W5 538 aaPredicted RBP25.08■■□□□ 1.61
HDAC4-209ENST00000487617 SNRKQ9NRH2 765 aa25.08■■□□□ 1.61
HDAC4-209ENST00000487617 DBNLQ9UJU6 430 aaKnown RBP25.08■■□□□ 1.61
HDAC4-209ENST00000487617 RPAP1Q9BWH6 1393 aaPredicted RBP25.07■■□□□ 1.6
HDAC4-209ENST00000487617 ZBTB48P10074 688 aaPredicted RBP25.07■■□□□ 1.6
HDAC4-209ENST00000487617 MAP3K9P80192 1104 aa25.07■■□□□ 1.6
HDAC4-209ENST00000487617 ELP3Q9H9T3 547 aa25.07■■□□□ 1.6
HDAC4-209ENST00000487617 TLR7Q9NYK1 1049 aaKnown RBP25.07■■□□□ 1.6
HDAC4-209ENST00000487617 RAI14Q9P0K7 980 aa25.07■■□□□ 1.6
HDAC4-209ENST00000487617 MROH7-TTC4A0A0A0MT08 1334 aa25.07■■□□□ 1.6
HDAC4-209ENST00000487617 BTDP43251 543 aa25.06■■□□□ 1.6
HDAC4-209ENST00000487617 GSTO1P78417 241 aa25.06■■□□□ 1.6
HDAC4-209ENST00000487617 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.06■■□□□ 1.6
HDAC4-209ENST00000487617 SIRT2Q8IXJ6 389 aa25.06■■□□□ 1.6
HDAC4-209ENST00000487617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.06■■□□□ 1.6
HDAC4-209ENST00000487617 LRP2BPQ9P2M1 347 aa25.06■■□□□ 1.6
HDAC4-209ENST00000487617 FAM198AQ9UFP1 575 aa25.06■■□□□ 1.6
HDAC4-209ENST00000487617 MANSC4A6NHS7 340 aaPredicted RBP25.05■■□□□ 1.6
HDAC4-209ENST00000487617 VGLL4Q14135 290 aa25.05■■□□□ 1.6
HDAC4-209ENST00000487617 DCAF15Q66K64 600 aa25.05■■□□□ 1.6
HDAC4-209ENST00000487617 ZNF384Q8TF68 577 aa25.05■■□□□ 1.6
HDAC4-209ENST00000487617 NSUN4Q96CB9 384 aaKnown RBP25.05■■□□□ 1.6
HDAC4-209ENST00000487617 ZNF512BQ96KM6 892 aaPredicted RBP25.05■■□□□ 1.6
HDAC4-209ENST00000487617 YTHDC1Q96MU7 727 aaKnown RBP25.05■■□□□ 1.6
HDAC4-209ENST00000487617 CSADQ9Y600 493 aa25.05■■□□□ 1.6
HDAC4-209ENST00000487617 CAPN15O75808 1086 aa25.04■■□□□ 1.6
HDAC4-209ENST00000487617 LDHCP07864 332 aa25.04■■□□□ 1.6
HDAC4-209ENST00000487617 GJA5P36382 358 aa25.04■■□□□ 1.6
HDAC4-209ENST00000487617 MIGA2Q7L4E1 593 aa25.04■■□□□ 1.6
HDAC4-209ENST00000487617 AACSQ86V21 672 aa25.04■■□□□ 1.6
HDAC4-209ENST00000487617 RHPN1Q8TCX5 695 aa25.04■■□□□ 1.6
HDAC4-209ENST00000487617 OPTNQ96CV9 577 aa25.04■■□□□ 1.6
HDAC4-209ENST00000487617 WRNIP1Q96S55 665 aa25.04■■□□□ 1.6
HDAC4-209ENST00000487617 GPR75-ASB3A0A0A6YYF3 556 aa25.03■■□□□ 1.6
HDAC4-209ENST00000487617 APBB1O00213 710 aa25.03■■□□□ 1.6
HDAC4-209ENST00000487617 RGS3P49796 1198 aa25.03■■□□□ 1.6
HDAC4-209ENST00000487617 INHBEP58166 350 aa25.03■■□□□ 1.6
HDAC4-209ENST00000487617 IDI2Q9BXS1 227 aa25.03■■□□□ 1.6
HDAC4-209ENST00000487617 IL1RAPL2Q9NP60 686 aa25.03■■□□□ 1.6
HDAC4-209ENST00000487617 AKAP11Q9UKA4 1901 aa25.02■■□□□ 1.6
HDAC4-209ENST00000487617 TBC1D8O95759 1140 aa25.02■■□□□ 1.6
HDAC4-209ENST00000487617 ZFPM1Q8IX07 1006 aa25.02■■□□□ 1.6
HDAC4-209ENST00000487617 ZNF341Q9BYN7 854 aa25.02■■□□□ 1.6
HDAC4-209ENST00000487617 MYH2Q9UKX2 1941 aa25.02■■□□□ 1.6
HDAC4-209ENST00000487617 ENTPD3O75355 529 aa25.01■■□□□ 1.59
HDAC4-209ENST00000487617 CYP2E1P05181 493 aaPredicted RBP25.01■■□□□ 1.59
HDAC4-209ENST00000487617 ZAP70P43403 619 aa25.01■■□□□ 1.59
HDAC4-209ENST00000487617 KIF1BPQ96EK5 621 aa25.01■■□□□ 1.59
HDAC4-209ENST00000487617 WDHD1O75717 1129 aaPredicted RBP25■■□□□ 1.59
HDAC4-209ENST00000487617 PICALMQ13492 652 aa25■■□□□ 1.59
HDAC4-209ENST00000487617 CNKSR2Q8WXI2 1034 aa25■■□□□ 1.59
HDAC4-209ENST00000487617 RAB11FIP3O75154 756 aa24.99■■□□□ 1.59
HDAC4-209ENST00000487617 ALDH1A1P00352 501 aa24.99■■□□□ 1.59
HDAC4-209ENST00000487617 RHBDL3P58872 404 aa24.99■■□□□ 1.59
HDAC4-209ENST00000487617 RFX7Q2KHR2 1363 aa24.99■■□□□ 1.59
HDAC4-209ENST00000487617 NAA16Q6N069 864 aaPredicted RBP24.99■■□□□ 1.59
HDAC4-209ENST00000487617 IFNL1Q8IU54 200 aa24.99■■□□□ 1.59
HDAC4-209ENST00000487617 ZSCAN29Q8IWY8 852 aaPredicted RBP24.99■■□□□ 1.59
HDAC4-209ENST00000487617 CLASRPQ8N2M8 674 aaKnown RBP24.99■■□□□ 1.59
HDAC4-209ENST00000487617 ZKSCAN4Q969J2 545 aaPredicted RBP24.99■■□□□ 1.59
HDAC4-209ENST00000487617 DDX4Q9NQI0 724 aaKnown RBP24.99■■□□□ 1.59
HDAC4-209ENST00000487617 SNCAIPQ9Y6H5 919 aa24.99■■□□□ 1.59
HDAC4-209ENST00000487617 OTOFQ9HC10 1997 aa24.98■■□□□ 1.59
HDAC4-209ENST00000487617 OTUD5Q96G74 571 aa24.98■■□□□ 1.59
HDAC4-209ENST00000487617 NOL10Q9BSC4 688 aaKnown RBP24.98■■□□□ 1.59
HDAC4-209ENST00000487617 BCL11AQ9H165 835 aa24.98■■□□□ 1.59
HDAC4-209ENST00000487617 PIH1D3Q9NQM4 214 aaKnown RBP24.98■■□□□ 1.59
HDAC4-209ENST00000487617 CASP8AP2Q9UKL3 1982 aa24.97■■□□□ 1.59
HDAC4-209ENST00000487617 SPDYE5A6NIY4 337 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms