RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 MCM6Q14566 821 aa9.62□□□□□ -0.87
GARNL3-218ENST00000487565 SLC15A2Q16348 729 aa9.62□□□□□ -0.87
GARNL3-218ENST00000487565 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.62□□□□□ -0.87
GARNL3-218ENST00000487565 BEND3Q5T5X7 828 aa9.62□□□□□ -0.87
GARNL3-218ENST00000487565 LCE2CQ5TA81 110 aa9.62□□□□□ -0.87
GARNL3-218ENST00000487565 SMIM5Q71RC9 77 aa9.62□□□□□ -0.87
GARNL3-218ENST00000487565 CHMP4BQ9H444 224 aaKnown RBP9.62□□□□□ -0.87
GARNL3-218ENST00000487565 GDPD2Q9HCC8 539 aa9.62□□□□□ -0.87
GARNL3-218ENST00000487565 POLMQ9NP87 494 aaPredicted RBP9.62□□□□□ -0.87
GARNL3-218ENST00000487565 SRP68Q9UHB9 627 aaKnown RBP9.62□□□□□ -0.87
GARNL3-218ENST00000487565 IBTKQ9P2D0 1353 aaPredicted RBP9.62□□□□□ -0.87
GARNL3-218ENST00000487565 NEURL1BA8MQ27 555 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 GPTP24298 496 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 ABL2P42684 1182 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 PTGIRP43119 386 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 CTSOP43234 321 aaPredicted RBP9.61□□□□□ -0.87
GARNL3-218ENST00000487565 IRF5Q13568 498 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 HLFQ16534 295 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
GARNL3-218ENST00000487565 USPL1Q5W0Q7 1092 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 IRF7Q92985 503 aa9.61□□□□□ -0.87
GARNL3-218ENST00000487565 CWC25Q9NXE8 425 aaPredicted RBP9.61□□□□□ -0.87
GARNL3-218ENST00000487565 COL24A1Q17RW2 1714 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 IGKV5-2P06315 115 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 TCIRG1Q13488 830 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 PARP10Q53GL7 1025 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 CLEC4GQ6UXB4 293 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 EXOC6Q8TAG9 804 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 ISCA1Q9BUE6 129 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 NIP7Q9Y221 180 aaKnown RBP eCLIP9.6□□□□□ -0.87
GARNL3-218ENST00000487565 PCDHB11Q9Y5F2 797 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 CARMIL3Q8ND23 1372 aa9.6□□□□□ -0.87
GARNL3-218ENST00000487565 AFDNP55196 1824 aaKnown RBP9.59□□□□□ -0.87
GARNL3-218ENST00000487565 GRM8O00222 908 aa9.59□□□□□ -0.87
GARNL3-218ENST00000487565 GNAI3P08754 354 aa9.59□□□□□ -0.87
GARNL3-218ENST00000487565 UBTFL1P0CB47 393 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-218ENST00000487565 CC2D2BQ6DHV5 1058 aa9.59□□□□□ -0.87
GARNL3-218ENST00000487565 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-218ENST00000487565 CCDC191Q8NCU4 936 aa9.59□□□□□ -0.87
GARNL3-218ENST00000487565 MEIS3Q99687 375 aa9.59□□□□□ -0.87
GARNL3-218ENST00000487565 C9orf78Q9NZ63 289 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-218ENST00000487565 UBN2Q6ZU65 1347 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 WIPF1O43516 503 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 GYS1P13807 737 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
GARNL3-218ENST00000487565 AAMPQ13685 434 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 GCKRQ14397 625 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 NLRP10Q86W26 655 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 ZNF34Q8IZ26 560 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 KDF1Q8NAX2 398 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-218ENST00000487565 CEP126Q9P2H0 1117 aa9.58□□□□□ -0.88
GARNL3-218ENST00000487565 NUP98P52948 1817 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 NPHP1O15259 732 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 PPFIA3O75145 1194 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 ERVK-9P63128 1117 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 VAC14Q08AM6 782 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 ERICH6BQ5W0A0 696 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 TBC1D9BQ66K14 1250 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 UBE3BQ7Z3V4 1068 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 PPP1R42Q7Z4L9 355 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 SETDB2Q96T68 719 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 UTP14AQ9BVJ6 771 aaKnown RBP9.57□□□□□ -0.88
GARNL3-218ENST00000487565 HDAC5Q9UQL6 1122 aa9.57□□□□□ -0.88
GARNL3-218ENST00000487565 LAMB2P55268 1798 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 CASZ1Q86V15 1759 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 FAM177BA6PVY3 158 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 NTSR2O95665 410 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 GNAI2P04899 355 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 PCCAP05165 728 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-218ENST00000487565 GMPRP36959 345 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 PTSQ03393 145 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 NFIXQ14938 502 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 R3HDM1Q15032 1099 aaKnown RBP9.56□□□□□ -0.88
GARNL3-218ENST00000487565 MSL1Q68DK7 614 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 NBPF5PQ86XG9 351 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-218ENST00000487565 NLGN1Q8N2Q7 840 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 RNF217Q8TC41 542 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 NYXQ9GZU5 481 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 USP44Q9H0E7 712 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 ZBTB40Q9NUA8 1239 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 TRMT112Q9UI30 125 aaKnown RBP9.56□□□□□ -0.88
GARNL3-218ENST00000487565 UTYO14607 1347 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
GARNL3-218ENST00000487565 ABCC12Q96J65 1359 aa9.55□□□□□ -0.88
GARNL3-218ENST00000487565 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-218ENST00000487565 NBPF7P0C2Y1 421 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-218ENST00000487565 HSP90B1P14625 803 aaKnown RBP9.55□□□□□ -0.88
GARNL3-218ENST00000487565 SCTRP47872 440 aa9.55□□□□□ -0.88
GARNL3-218ENST00000487565 WASHC4Q2M389 1173 aa9.55□□□□□ -0.88
GARNL3-218ENST00000487565 SUSD4Q5VX71 490 aa9.55□□□□□ -0.88
GARNL3-218ENST00000487565 CNBD1Q8NA66 436 aa9.55□□□□□ -0.88
GARNL3-218ENST00000487565 ZBTB38Q8NAP3 1195 aaPredicted RBP9.55□□□□□ -0.88
GARNL3-218ENST00000487565 LRRFIP2Q9Y608 721 aaKnown RBP9.55□□□□□ -0.88
GARNL3-218ENST00000487565 H7C1W4 665 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 MEN1O00255 615 aa9.54□□□□□ -0.88
GARNL3-218ENST00000487565 MMP10P09238 476 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms