RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 MIGA2Q7L4E1 593 aa24.4■■□□□ 1.5
SMPDL3A-202ENST00000487215 ZNF341Q9BYN7 854 aa24.4■■□□□ 1.5
SMPDL3A-202ENST00000487215 PTPRCP08575 1304 aa24.39■■□□□ 1.5
SMPDL3A-202ENST00000487215 ZNF521Q96K83 1311 aa24.39■■□□□ 1.5
SMPDL3A-202ENST00000487215 INPP5BP32019 993 aa24.39■■□□□ 1.49
SMPDL3A-202ENST00000487215 ZEB1P37275 1124 aaPredicted RBP24.39■■□□□ 1.49
SMPDL3A-202ENST00000487215 PPATQ06203 517 aa24.39■■□□□ 1.49
SMPDL3A-202ENST00000487215 USP44Q9H0E7 712 aa24.39■■□□□ 1.49
SMPDL3A-202ENST00000487215 GNRH1P01148 92 aa24.38■■□□□ 1.49
SMPDL3A-202ENST00000487215 C17orf99Q6UX52 265 aa24.38■■□□□ 1.49
SMPDL3A-202ENST00000487215 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.38■■□□□ 1.49
SMPDL3A-202ENST00000487215 ECM2O94769 699 aaPredicted RBP24.37■■□□□ 1.49
SMPDL3A-202ENST00000487215 FXR1P51114 621 aaKnown RBP eCLIP24.37■■□□□ 1.49
SMPDL3A-202ENST00000487215 PRMT2P55345 433 aa24.37■■□□□ 1.49
SMPDL3A-202ENST00000487215 WDR66Q8TBY9 1149 aa24.37■■□□□ 1.49
SMPDL3A-202ENST00000487215 FAM151AQ8WW52 585 aa24.37■■□□□ 1.49
SMPDL3A-202ENST00000487215 EYA2O00167 538 aa24.36■■□□□ 1.49
SMPDL3A-202ENST00000487215 SLC5A1P13866 664 aa24.36■■□□□ 1.49
SMPDL3A-202ENST00000487215 CTGFP29279 349 aa24.36■■□□□ 1.49
SMPDL3A-202ENST00000487215 RFX5P48382 616 aaPredicted RBP24.36■■□□□ 1.49
SMPDL3A-202ENST00000487215 CPA4Q9UI42 421 aa24.36■■□□□ 1.49
SMPDL3A-202ENST00000487215 DAGLAQ9Y4D2 1042 aa24.36■■□□□ 1.49
SMPDL3A-202ENST00000487215 ANKRD23Q86SG2 305 aa24.35■■□□□ 1.49
SMPDL3A-202ENST00000487215 LPIN2Q92539 896 aa24.35■■□□□ 1.49
SMPDL3A-202ENST00000487215 ZNF112Q9UJU3 913 aa24.35■■□□□ 1.49
SMPDL3A-202ENST00000487215 KCNH4Q9UQ05 1017 aa24.35■■□□□ 1.49
SMPDL3A-202ENST00000487215 COLQQ9Y215 455 aaPredicted RBP24.35■■□□□ 1.49
SMPDL3A-202ENST00000487215 ADGRA2Q96PE1 1338 aa24.35■■□□□ 1.49
SMPDL3A-202ENST00000487215 TCP10Q12799 353 aa24.34■■□□□ 1.49
SMPDL3A-202ENST00000487215 NFIAQ12857 509 aa24.34■■□□□ 1.49
SMPDL3A-202ENST00000487215 DIXDC1Q155Q3 683 aa24.34■■□□□ 1.49
SMPDL3A-202ENST00000487215 CDC42EP5Q6NZY7 148 aa24.34■■□□□ 1.49
SMPDL3A-202ENST00000487215 SSH1Q8WYL5 1049 aa24.34■■□□□ 1.49
SMPDL3A-202ENST00000487215 PDHXO00330 501 aa24.33■■□□□ 1.49
SMPDL3A-202ENST00000487215 PSMC4P43686 418 aa24.33■■□□□ 1.49
SMPDL3A-202ENST00000487215 TRIM47Q96LD4 638 aa24.33■■□□□ 1.49
SMPDL3A-202ENST00000487215 SRRDQ9UH36 339 aa24.33■■□□□ 1.49
SMPDL3A-202ENST00000487215 MYH13Q9UKX3 1938 aa24.32■■□□□ 1.48
SMPDL3A-202ENST00000487215 PRDX5P30044 214 aa24.32■■□□□ 1.48
SMPDL3A-202ENST00000487215 MOGSQ13724 837 aa24.32■■□□□ 1.48
SMPDL3A-202ENST00000487215 MTFR1Q15390 333 aa24.32■■□□□ 1.48
SMPDL3A-202ENST00000487215 ATG9AQ7Z3C6 839 aa24.32■■□□□ 1.48
SMPDL3A-202ENST00000487215 H0YGN5 161 aa24.31■■□□□ 1.48
SMPDL3A-202ENST00000487215 OSBPP22059 807 aa24.31■■□□□ 1.48
SMPDL3A-202ENST00000487215 NOL9Q5SY16 702 aaKnown RBP24.31■■□□□ 1.48
SMPDL3A-202ENST00000487215 SHISA4Q96DD7 197 aa24.31■■□□□ 1.48
SMPDL3A-202ENST00000487215 FAM198AQ9UFP1 575 aa24.31■■□□□ 1.48
SMPDL3A-202ENST00000487215 FMNL1O95466 1100 aaPredicted RBP24.29■■□□□ 1.48
SMPDL3A-202ENST00000487215 USP40Q9NVE5 1235 aa24.29■■□□□ 1.48
SMPDL3A-202ENST00000487215 LDHBP07195 334 aaKnown RBP24.28■■□□□ 1.48
SMPDL3A-202ENST00000487215 HOXD10P28358 340 aa24.28■■□□□ 1.48
SMPDL3A-202ENST00000487215 GRK4P32298 578 aa24.28■■□□□ 1.48
SMPDL3A-202ENST00000487215 ATP2B3Q16720 1220 aa24.28■■□□□ 1.48
SMPDL3A-202ENST00000487215 ZFPM1Q8IX07 1006 aa24.28■■□□□ 1.48
SMPDL3A-202ENST00000487215 RAET1EQ8TD07 263 aa24.28■■□□□ 1.48
SMPDL3A-202ENST00000487215 SIL1Q9H173 461 aa24.28■■□□□ 1.48
SMPDL3A-202ENST00000487215 MYPNQ86TC9 1320 aa24.28■■□□□ 1.48
SMPDL3A-202ENST00000487215 E9PSI1 815 aa24.27■■□□□ 1.48
SMPDL3A-202ENST00000487215 GPAT2Q6NUI2 795 aa24.27■■□□□ 1.48
SMPDL3A-202ENST00000487215 PARK7Q99497 189 aaKnown RBP24.27■■□□□ 1.48
SMPDL3A-202ENST00000487215 SALL1Q9NSC2 1324 aa24.27■■□□□ 1.48
SMPDL3A-202ENST00000487215 ATRNL1Q5VV63 1379 aa24.27■■□□□ 1.48
SMPDL3A-202ENST00000487215 CIAO1O76071 339 aa24.26■■□□□ 1.47
SMPDL3A-202ENST00000487215 GNL3LQ9NVN8 582 aaKnown RBP24.26■■□□□ 1.47
SMPDL3A-202ENST00000487215 FBXO3Q9UK99 471 aa24.26■■□□□ 1.47
SMPDL3A-202ENST00000487215 CXCL11O14625 94 aa24.25■■□□□ 1.47
SMPDL3A-202ENST00000487215 CYP2C8P10632 490 aa24.25■■□□□ 1.47
SMPDL3A-202ENST00000487215 BCRP11274 1271 aa24.25■■□□□ 1.47
SMPDL3A-202ENST00000487215 PHKA1P46020 1223 aa24.25■■□□□ 1.47
SMPDL3A-202ENST00000487215 CEP126Q9P2H0 1117 aa24.25■■□□□ 1.47
SMPDL3A-202ENST00000487215 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
SMPDL3A-202ENST00000487215 PHF20L1A8MW92 1017 aa24.24■■□□□ 1.47
SMPDL3A-202ENST00000487215 PRKCZQ05513 592 aa24.24■■□□□ 1.47
SMPDL3A-202ENST00000487215 NKX2-3Q8TAU0 364 aa24.24■■□□□ 1.47
SMPDL3A-202ENST00000487215 DENND2AQ9ULE3 1009 aa24.24■■□□□ 1.47
SMPDL3A-202ENST00000487215 SEMA3EO15041 775 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 GJB1P08034 283 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 UBTFL1P0CB47 393 aaPredicted RBP24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 CCL5P13501 91 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 GJA8P48165 433 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 RGS3P49796 1198 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 FCGRTP55899 365 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 ALDH1L2Q3SY69 923 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 SCYL3Q8IZE3 742 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 RFX7Q2KHR2 1363 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 AK9Q5TCS8 1911 aa24.23■■□□□ 1.47
SMPDL3A-202ENST00000487215 DOCK2Q92608 1830 aa24.22■■□□□ 1.47
SMPDL3A-202ENST00000487215 SLFN5Q08AF3 891 aa24.22■■□□□ 1.47
SMPDL3A-202ENST00000487215 CHRDL2Q6WN34 429 aa24.22■■□□□ 1.47
SMPDL3A-202ENST00000487215 UBE2Q1Q7Z7E8 422 aa24.22■■□□□ 1.47
SMPDL3A-202ENST00000487215 DPF3Q92784 378 aa24.22■■□□□ 1.47
SMPDL3A-202ENST00000487215 IDI2Q9BXS1 227 aa24.22■■□□□ 1.47
SMPDL3A-202ENST00000487215 ZHX2Q9Y6X8 837 aa24.22■■□□□ 1.47
SMPDL3A-202ENST00000487215 GAKO14976 1311 aa24.21■■□□□ 1.47
SMPDL3A-202ENST00000487215 A0A0G2JLL6 359 aaPredicted RBP24.21■■□□□ 1.47
SMPDL3A-202ENST00000487215 ENTPD3O75355 529 aa24.21■■□□□ 1.47
SMPDL3A-202ENST00000487215 SH3BP5LQ7L8J4 393 aa24.21■■□□□ 1.47
SMPDL3A-202ENST00000487215 PRRT2Q7Z6L0 340 aaPredicted RBP24.21■■□□□ 1.47
SMPDL3A-202ENST00000487215 RNF208Q9H0X6 261 aa24.21■■□□□ 1.47
SMPDL3A-202ENST00000487215 PICK1Q9NRD5 415 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms