RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 Q6ZUG5 572 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 ADGRA1Q86SQ6 560 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 SLC51AQ86UW1 340 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 ZNF384Q8TF68 577 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 FAM163AQ96GL9 167 aaPredicted RBP7.28□□□□□ -1.24
VAMP3-203ENST00000487194 AGXT2Q9BYV1 514 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 KRT23Q9C075 422 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 VPS33BQ9H267 617 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 EPB41L4AQ9HCS5 686 aaPredicted RBP7.28□□□□□ -1.24
VAMP3-203ENST00000487194 FOXD4L1Q9NU39 408 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 ANAPC4Q9UJX5 808 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 JAG2Q9Y219 1238 aa7.28□□□□□ -1.24
VAMP3-203ENST00000487194 MROH7-TTC4A0A0A0MT08 1334 aa7.27□□□□□ -1.24
VAMP3-203ENST00000487194 KIAA1551Q9HCM1 1747 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 SLX4Q8IY92 1834 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 PRC1O43663 620 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 PRKAB2O43741 272 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 ZBTB7AO95365 584 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 SLC3A2P08195 630 aaKnown RBP7.27□□□□□ -1.25
VAMP3-203ENST00000487194 DPEP1P16444 411 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 DYNLL1P63167 89 aaKnown RBP7.27□□□□□ -1.25
VAMP3-203ENST00000487194 KIAA2012Q0VF49 1180 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 TOB2Q14106 344 aaPredicted RBP7.27□□□□□ -1.25
VAMP3-203ENST00000487194 R3HDM1Q15032 1099 aaKnown RBP7.27□□□□□ -1.25
VAMP3-203ENST00000487194 RAB3GAP1Q15042 981 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 AKNAD1Q5T1N1 836 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 OLFM4Q6UX06 510 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 AMOTL1Q8IY63 956 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 MB21D2Q8IYB1 491 aaPredicted RBP7.27□□□□□ -1.25
VAMP3-203ENST00000487194 STAG1Q8WVM7 1258 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 ZNF274Q96GC6 653 aaPredicted RBP7.27□□□□□ -1.25
VAMP3-203ENST00000487194 PSMD1Q99460 953 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 MTA3Q9BTC8 594 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 AATFQ9NY61 560 aaKnown RBP eCLIP7.27□□□□□ -1.25
VAMP3-203ENST00000487194 PIM2Q9P1W9 311 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 ARPP21Q9UBL0 812 aaPredicted RBP7.27□□□□□ -1.25
VAMP3-203ENST00000487194 TPCN1Q9ULQ1 816 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 SMC3Q9UQE7 1217 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 DLEC1Q9Y238 1755 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 LAMA4Q16363 1823 aa7.27□□□□□ -1.25
VAMP3-203ENST00000487194 GPR75-ASB3A0A0A6YYF3 556 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 A0A0G2JLW4 131 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 C21orf2O43822 256 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 EVCP57679 992 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 PPARAQ07869 468 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 SART3Q15020 963 aaKnown RBP7.26□□□□□ -1.25
VAMP3-203ENST00000487194 ME3Q16798 604 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 DOK7Q18PE1 504 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 SBK1Q52WX2 424 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 STRIP1Q5VSL9 837 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 TBC1D10CQ8IV04 446 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 CCDC83Q8IWF9 413 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 SDR42E1Q8WUS8 393 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 BRF1Q92994 677 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 FBXW7Q969H0 707 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 TMEM87BQ96K49 555 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 TCEANC2Q96MN5 208 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 GBP4Q96PP9 640 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 LLPHQ9BRT6 129 aaKnown RBP7.26□□□□□ -1.25
VAMP3-203ENST00000487194 MRIQ9BWK5 157 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 ZNF219Q9P2Y4 722 aaPredicted RBP7.26□□□□□ -1.25
VAMP3-203ENST00000487194 ATF5Q9Y2D1 282 aaPredicted RBP7.26□□□□□ -1.25
VAMP3-203ENST00000487194 CD2APQ9Y5K6 639 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 KIF13BQ9NQT8 1826 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 TIAM2Q8IVF5 1701 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 SNED1Q8TER0 1413 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 GAKO14976 1311 aa7.26□□□□□ -1.25
VAMP3-203ENST00000487194 ERICH2A1L162 156 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 MINDY4BA8MYZ0 360 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 PPIP5K2O43314 1243 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 DHX16O60231 1041 aaKnown RBP7.25□□□□□ -1.25
VAMP3-203ENST00000487194 ECE2O60344 883 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 PFKFB2O60825 505 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 LARGE1O95461 756 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 PDCP20941 246 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 PTMSP20962 102 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 KCNA3P22001 575 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 BTDP43251 543 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 USP5P45974 858 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 HDLBPQ00341 1268 aaKnown RBP7.25□□□□□ -1.25
VAMP3-203ENST00000487194 CTDSPL2Q05D32 466 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 DIXDC1Q155Q3 683 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 NFKBIBQ15653 356 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 DALRD3Q5D0E6 543 aaKnown RBP7.25□□□□□ -1.25
VAMP3-203ENST00000487194 CTR9Q6PD62 1173 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 HHIPL2Q6UWX4 724 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 TEX11Q8IYF3 940 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 TMTC2Q8N394 836 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 ESR2Q92731 530 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 GTF3C6Q969F1 213 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 LARP6Q9BRS8 491 aaKnown RBP7.25□□□□□ -1.25
VAMP3-203ENST00000487194 ANP32EQ9BTT0 268 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 NBPF3Q9H094 633 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 DBNDD1Q9H9R9 158 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 DCP1AQ9NPI6 582 aaPredicted RBP7.25□□□□□ -1.25
VAMP3-203ENST00000487194 ANGEL1Q9UNK9 670 aaKnown RBP7.25□□□□□ -1.25
VAMP3-203ENST00000487194 TTF2Q9UNY4 1162 aaKnown RBP7.25□□□□□ -1.25
VAMP3-203ENST00000487194 KIF3AQ9Y496 699 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 NEDD4P46934 1319 aa7.25□□□□□ -1.25
VAMP3-203ENST00000487194 MYO3BQ8WXR4 1341 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms