RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 TBC1D9Q6ZT07 1266 aa27.47■■□□□ 1.99
CDHR3-212ENST00000487084 AACSQ86V21 672 aa27.47■■□□□ 1.99
CDHR3-212ENST00000487084 IL1RAPL2Q9NP60 686 aa27.47■■□□□ 1.99
CDHR3-212ENST00000487084 CDC42EP5Q6NZY7 148 aa27.46■■□□□ 1.99
CDHR3-212ENST00000487084 SLF2Q8IX21 1173 aa27.46■■□□□ 1.99
CDHR3-212ENST00000487084 RHPN1Q8TCX5 695 aa27.46■■□□□ 1.99
CDHR3-212ENST00000487084 TEPSINQ96N21 525 aa27.46■■□□□ 1.99
CDHR3-212ENST00000487084 RAI14Q9P0K7 980 aa27.46■■□□□ 1.99
CDHR3-212ENST00000487084 MKRN3Q13064 507 aaKnown RBP27.45■■□□□ 1.98
CDHR3-212ENST00000487084 USP40Q9NVE5 1235 aa27.45■■□□□ 1.98
CDHR3-212ENST00000487084 IREB2P48200 963 aaKnown RBP27.44■■□□□ 1.98
CDHR3-212ENST00000487084 MECOMQ03112 1051 aa27.44■■□□□ 1.98
CDHR3-212ENST00000487084 COL13A1Q5TAT6 717 aaPredicted RBP27.44■■□□□ 1.98
CDHR3-212ENST00000487084 FKBP1CQ5VVH2 108 aa27.44■■□□□ 1.98
CDHR3-212ENST00000487084 LRP2BPQ9P2M1 347 aa27.44■■□□□ 1.98
CDHR3-212ENST00000487084 TSKSQ9UJT2 592 aa27.44■■□□□ 1.98
CDHR3-212ENST00000487084 LBX1P52954 281 aa27.43■■□□□ 1.98
CDHR3-212ENST00000487084 MAP3K11Q16584 847 aa27.43■■□□□ 1.98
CDHR3-212ENST00000487084 LDLRAD1Q5T700 205 aa27.43■■□□□ 1.98
CDHR3-212ENST00000487084 FAM83AQ86UY5 434 aa27.43■■□□□ 1.98
CDHR3-212ENST00000487084 KIF1BPQ96EK5 621 aa27.43■■□□□ 1.98
CDHR3-212ENST00000487084 GAKO14976 1311 aa27.42■■□□□ 1.98
CDHR3-212ENST00000487084 HSPA8P11142 646 aaKnown RBP27.42■■□□□ 1.98
CDHR3-212ENST00000487084 TCP10Q12799 353 aa27.42■■□□□ 1.98
CDHR3-212ENST00000487084 MROH7-TTC4A0A0A0MT08 1334 aa27.41■■□□□ 1.98
CDHR3-212ENST00000487084 USP2O75604 605 aaPredicted RBP27.41■■□□□ 1.98
CDHR3-212ENST00000487084 BTDP43251 543 aa27.41■■□□□ 1.98
CDHR3-212ENST00000487084 GSTO1P78417 241 aa27.41■■□□□ 1.98
CDHR3-212ENST00000487084 NFIAQ12857 509 aa27.41■■□□□ 1.98
CDHR3-212ENST00000487084 CLASRPQ8N2M8 674 aaKnown RBP27.41■■□□□ 1.98
CDHR3-212ENST00000487084 SLC10A4Q96EP9 437 aa27.41■■□□□ 1.98
CDHR3-212ENST00000487084 CLMNQ96JQ2 1002 aa27.41■■□□□ 1.98
CDHR3-212ENST00000487084 MYH2Q9UKX2 1941 aa27.4■■□□□ 1.98
CDHR3-212ENST00000487084 RAB11FIP3O75154 756 aa27.4■■□□□ 1.98
CDHR3-212ENST00000487084 ZAP70P43403 619 aa27.4■■□□□ 1.98
CDHR3-212ENST00000487084 NSUN4Q96CB9 384 aaKnown RBP27.4■■□□□ 1.98
CDHR3-212ENST00000487084 ZNF512BQ96KM6 892 aaPredicted RBP27.4■■□□□ 1.98
CDHR3-212ENST00000487084 CA12O43570 354 aa27.39■■□□□ 1.98
CDHR3-212ENST00000487084 ZNF384Q8TF68 577 aa27.39■■□□□ 1.98
CDHR3-212ENST00000487084 FAM151AQ8WW52 585 aa27.39■■□□□ 1.98
CDHR3-212ENST00000487084 FAM163AQ96GL9 167 aaPredicted RBP27.39■■□□□ 1.98
CDHR3-212ENST00000487084 CSRNP1Q96S65 589 aa27.39■■□□□ 1.98
CDHR3-212ENST00000487084 RPAP1Q9BWH6 1393 aaPredicted RBP27.38■■□□□ 1.97
CDHR3-212ENST00000487084 CYP2E1P05181 493 aaPredicted RBP27.38■■□□□ 1.97
CDHR3-212ENST00000487084 LDHCP07864 332 aa27.38■■□□□ 1.97
CDHR3-212ENST00000487084 IFIT2P09913 472 aaKnown RBP27.38■■□□□ 1.97
CDHR3-212ENST00000487084 ANKRD13AQ8IZ07 590 aa27.38■■□□□ 1.97
CDHR3-212ENST00000487084 HOOK2Q96ED9 719 aa27.37■■□□□ 1.97
CDHR3-212ENST00000487084 PRDM10Q9NQV6 1147 aa27.37■■□□□ 1.97
CDHR3-212ENST00000487084 FAM198AQ9UFP1 575 aa27.37■■□□□ 1.97
CDHR3-212ENST00000487084 SPRYD7Q5W111 196 aa27.36■■□□□ 1.97
CDHR3-212ENST00000487084 NDUFB9Q9Y6M9 179 aa27.36■■□□□ 1.97
CDHR3-212ENST00000487084 GPR75-ASB3A0A0A6YYF3 556 aa27.35■■□□□ 1.97
CDHR3-212ENST00000487084 UNCXA6NJT0 531 aa27.35■■□□□ 1.97
CDHR3-212ENST00000487084 RGS3P49796 1198 aa27.35■■□□□ 1.97
CDHR3-212ENST00000487084 PICALMQ13492 652 aa27.35■■□□□ 1.97
CDHR3-212ENST00000487084 NAA16Q6N069 864 aaPredicted RBP27.35■■□□□ 1.97
CDHR3-212ENST00000487084 REM2Q8IYK8 340 aaPredicted RBP27.35■■□□□ 1.97
CDHR3-212ENST00000487084 ELP3Q9H9T3 547 aa27.35■■□□□ 1.97
CDHR3-212ENST00000487084 PIH1D3Q9NQM4 214 aaKnown RBP27.35■■□□□ 1.97
CDHR3-212ENST00000487084 TRPA1O75762 1119 aa27.34■■□□□ 1.97
CDHR3-212ENST00000487084 DCAF15Q66K64 600 aa27.34■■□□□ 1.97
CDHR3-212ENST00000487084 MIGA2Q7L4E1 593 aa27.34■■□□□ 1.97
CDHR3-212ENST00000487084 WNK4Q96J92 1243 aa27.34■■□□□ 1.97
CDHR3-212ENST00000487084 CRBNQ96SW2 442 aa27.34■■□□□ 1.97
CDHR3-212ENST00000487084 NOL10Q9BSC4 688 aaKnown RBP27.34■■□□□ 1.97
CDHR3-212ENST00000487084 AKAP11Q9UKA4 1901 aa27.33■■□□□ 1.97
CDHR3-212ENST00000487084 MAP3K9P80192 1104 aa27.33■■□□□ 1.97
CDHR3-212ENST00000487084 ZSCAN29Q8IWY8 852 aaPredicted RBP27.33■■□□□ 1.97
CDHR3-212ENST00000487084 ZFPM1Q8IX07 1006 aa27.33■■□□□ 1.97
CDHR3-212ENST00000487084 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.33■■□□□ 1.97
CDHR3-212ENST00000487084 WRNIP1Q96S55 665 aa27.33■■□□□ 1.97
CDHR3-212ENST00000487084 IDI2Q9BXS1 227 aa27.33■■□□□ 1.97
CDHR3-212ENST00000487084 RNF186Q9NXI6 227 aa27.33■■□□□ 1.97
CDHR3-212ENST00000487084 CSADQ9Y600 493 aa27.33■■□□□ 1.97
CDHR3-212ENST00000487084 IDH1O75874 414 aaKnown RBP27.32■■□□□ 1.96
CDHR3-212ENST00000487084 SREBF2Q12772 1141 aa27.32■■□□□ 1.96
CDHR3-212ENST00000487084 VGLL4Q14135 290 aa27.32■■□□□ 1.96
CDHR3-212ENST00000487084 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.32■■□□□ 1.96
CDHR3-212ENST00000487084 TNS4Q8IZW8 715 aa27.32■■□□□ 1.96
CDHR3-212ENST00000487084 LRRCC1Q9C099 1032 aa27.32■■□□□ 1.96
CDHR3-212ENST00000487084 ENTPD3O75355 529 aa27.31■■□□□ 1.96
CDHR3-212ENST00000487084 WDHD1O75717 1129 aaPredicted RBP27.31■■□□□ 1.96
CDHR3-212ENST00000487084 ZBTB48P10074 688 aaPredicted RBP27.31■■□□□ 1.96
CDHR3-212ENST00000487084 RHBDL3P58872 404 aa27.31■■□□□ 1.96
CDHR3-212ENST00000487084 ZNF341Q9BYN7 854 aa27.31■■□□□ 1.96
CDHR3-212ENST00000487084 DDX4Q9NQI0 724 aaKnown RBP27.31■■□□□ 1.96
CDHR3-212ENST00000487084 SAGE1Q9NXZ1 904 aa27.31■■□□□ 1.96
CDHR3-212ENST00000487084 RFX7Q2KHR2 1363 aa27.31■■□□□ 1.96
CDHR3-212ENST00000487084 OTOFQ9HC10 1997 aa27.31■■□□□ 1.96
CDHR3-212ENST00000487084 SMARCA5O60264 1052 aaPredicted RBP27.3■■□□□ 1.96
CDHR3-212ENST00000487084 OPTNQ96CV9 577 aa27.3■■□□□ 1.96
CDHR3-212ENST00000487084 ANTXR1Q9H6X2 564 aa27.3■■□□□ 1.96
CDHR3-212ENST00000487084 MAST2Q6P0Q8 1798 aa27.3■■□□□ 1.96
CDHR3-212ENST00000487084 TEX11Q8IYF3 940 aa27.29■■□□□ 1.96
CDHR3-212ENST00000487084 AATFQ9NY61 560 aaKnown RBP eCLIP27.29■■□□□ 1.96
CDHR3-212ENST00000487084 PCDHB15Q9Y5E8 787 aa27.29■■□□□ 1.96
CDHR3-212ENST00000487084 AK9Q5TCS8 1911 aa27.28■■□□□ 1.96
CDHR3-212ENST00000487084 MANSC4A6NHS7 340 aaPredicted RBP27.28■■□□□ 1.96
CDHR3-212ENST00000487084 BAG3O95817 575 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms