RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 ORAI2Q96SN7 254 aa8.66□□□□□ -1.02
SMARCAL1-212ENST00000486983 SRCIN1Q9C0H9 1055 aa8.66□□□□□ -1.02
SMARCAL1-212ENST00000486983 TNS3Q68CZ2 1445 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 PIK3R2O00459 728 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 RNMTO43148 476 aaKnown RBP8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 RAB11FIP3O75154 756 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 REC8O95072 547 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 UBTFL1P0CB47 393 aaPredicted RBP8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 SDSP20132 328 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 PTMSP20962 102 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 C1orf141Q5JVX7 400 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 KRT28Q7Z3Y7 464 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 PROSER2Q86WR7 435 aaPredicted RBP8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 SSH3Q8TE77 659 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 XAGE2Q96GT9 111 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 CDCA7Q9BWT1 371 aaPredicted RBP8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 LRRCC1Q9C099 1032 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 HDAC5Q9UQL6 1122 aa8.65□□□□□ -1.02
SMARCAL1-212ENST00000486983 CPDO75976 1380 aa8.64□□□□□ -1.03
SMARCAL1-212ENST00000486983 TUBGCP6Q96RT7 1819 aa8.64□□□□□ -1.03
SMARCAL1-212ENST00000486983 CRYBG1Q9Y4K1 1723 aa8.64□□□□□ -1.03
SMARCAL1-212ENST00000486983 BTBD11A6QL63 1104 aa8.64□□□□□ -1.03
SMARCAL1-212ENST00000486983 PDE1AP54750 535 aa8.64□□□□□ -1.03
SMARCAL1-212ENST00000486983 IL17RAQ96F46 866 aa8.64□□□□□ -1.03
SMARCAL1-212ENST00000486983 USP44Q9H0E7 712 aa8.64□□□□□ -1.03
SMARCAL1-212ENST00000486983 DBF4Q9UBU7 674 aaPredicted RBP8.64□□□□□ -1.03
SMARCAL1-212ENST00000486983 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 PARP4Q9UKK3 1724 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 TMEM94Q12767 1356 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 NPHP3Q7Z494 1330 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 NEURL1BA8MQ27 555 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 ALDH1L1O75891 902 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 HSP90AB1P08238 724 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 ARAFP10398 606 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 PRKCSHP14314 528 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 MX1P20591 662 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 MCM4P33991 863 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 MTX1Q13505 466 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 HSP90AB4PQ58FF6 505 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 BEND3Q5T5X7 828 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 DNAAF4Q8WXU2 420 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 LRRC59Q96AG4 307 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 CCDC85AQ96PX6 553 aaPredicted RBP8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 USP26Q9BXU7 913 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 CRISPLD1Q9H336 500 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 SEMA6BQ9H3T3 888 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 LGR6Q9HBX8 967 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 NOP53Q9NZM5 478 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 LRRFIP2Q9Y608 721 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 COL18A1P39060 1754 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 PKD1L3Q7Z443 1732 aa8.63□□□□□ -1.03
SMARCAL1-212ENST00000486983 ADCY9O60503 1353 aa8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 USP42Q9H9J4 1324 aaKnown RBP8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 PNMA6EA0A0J9YXQ4 647 aa8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 ERC2O15083 957 aa8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 MYCP01106 439 aaPredicted RBP8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 ATF3P18847 181 aa8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 GTF2E1P29083 439 aaPredicted RBP8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 DOC2BQ14184 412 aa8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 CLEC17AQ6ZS10 378 aa8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 OTUD7AQ8TE49 926 aaPredicted RBP8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 DNAAF2Q9NVR5 837 aaKnown RBP8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 CHPF2Q9P2E5 772 aa8.62□□□□□ -1.03
SMARCAL1-212ENST00000486983 SMARCA5O60264 1052 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 STAU1O95793 577 aaKnown RBP8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 ANAPC15P60006 121 aa8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 RAB3GAP1Q15042 981 aa8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 CHSY3Q70JA7 882 aa8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 PCMTD1Q96MG8 357 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 PHAXQ9H814 394 aaKnown RBP8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 HYPKQ9NX55 129 aa8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 EXOC6BQ9Y2D4 811 aa8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 KDM6AO15550 1401 aaPredicted RBP8.61□□□□□ -1.03
SMARCAL1-212ENST00000486983 UTYO14607 1347 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 XIRP1Q702N8 1843 aaKnown RBP8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 PI4KAP2A4QPH2 592 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 MCM2P49736 904 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 MPRIPQ6WCQ1 1025 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 PI4KAP1Q8N8J0 262 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 RAPGEF4Q8WZA2 1011 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 KIF1BPQ96EK5 621 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 GBP4Q96PP9 640 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 HCN2Q9UL51 889 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 ISY1Q9ULR0 285 aaKnown RBP8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 SCN11AQ9UI33 1791 aa8.6□□□□□ -1.03
SMARCAL1-212ENST00000486983 MEGF6O75095 1541 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 TATP17735 454 aaPredicted RBP8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 MCCP23508 829 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 PLA2G4AP47712 749 aa8.59□□□□□ -1.03
SMARCAL1-212ENST00000486983 XPCQ01831 940 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms