RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RNF113AO15541 343 aaKnown RBP15.45■□□□□ 0.06
HDAC6-229ENST00000486665 PDE6AP16499 860 aa15.45■□□□□ 0.06
HDAC6-229ENST00000486665 MAP3K12Q12852 859 aa15.45■□□□□ 0.06
HDAC6-229ENST00000486665 SLC9C2Q5TAH2 1124 aa15.45■□□□□ 0.06
HDAC6-229ENST00000486665 KIAA0825Q8IV33 1275 aa15.45■□□□□ 0.06
HDAC6-229ENST00000486665 MAGEB6Q8N7X4 407 aa15.45■□□□□ 0.06
HDAC6-229ENST00000486665 NSUN4Q96CB9 384 aaKnown RBP15.45■□□□□ 0.06
HDAC6-229ENST00000486665 HHIPL1Q96JK4 782 aa15.45■□□□□ 0.06
HDAC6-229ENST00000486665 ZNF646O15015 1829 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-229ENST00000486665 TCRBV5S4A2TA0A5A2 114 aa15.44■□□□□ 0.06
HDAC6-229ENST00000486665 CCDC85CA6NKD9 419 aa15.44■□□□□ 0.06
HDAC6-229ENST00000486665 CHMLP26374 656 aa15.44■□□□□ 0.06
HDAC6-229ENST00000486665 ADD2P35612 726 aa15.44■□□□□ 0.06
HDAC6-229ENST00000486665 RBM26Q5T8P6 1007 aaKnown RBP15.44■□□□□ 0.06
HDAC6-229ENST00000486665 DPF2Q92785 391 aa15.44■□□□□ 0.06
HDAC6-229ENST00000486665 TTF2Q9UNY4 1162 aaKnown RBP15.44■□□□□ 0.06
HDAC6-229ENST00000486665 SUGT1Q9Y2Z0 365 aa15.44■□□□□ 0.06
HDAC6-229ENST00000486665 PSME4Q14997 1843 aa15.44■□□□□ 0.06
HDAC6-229ENST00000486665 ZNF532Q9HCE3 1301 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 MYH13Q9UKX3 1938 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 FAM155AB1AL88 458 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-229ENST00000486665 CYP7A1P22680 504 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 HUNKP57058 714 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 DIXDC1Q155Q3 683 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 NAA16Q6N069 864 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-229ENST00000486665 ADGRA1Q86SQ6 560 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 DZIP1Q86YF9 867 aaKnown RBP15.43■□□□□ 0.06
HDAC6-229ENST00000486665 AGBL3Q8NEM8 1001 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 FAM227BQ96M60 508 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.43■□□□□ 0.061e-6■■■■□ 26.5
HDAC6-229ENST00000486665 MCOLN1Q9GZU1 580 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 MYO3BQ8WXR4 1341 aa15.43■□□□□ 0.06
HDAC6-229ENST00000486665 MYO5AQ9Y4I1 1855 aaKnown RBP15.42■□□□□ 0.06
HDAC6-229ENST00000486665 TNRC18O15417 2968 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-229ENST00000486665 NMIQ13287 307 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-229ENST00000486665 UBE3CQ15386 1083 aa15.42■□□□□ 0.06
HDAC6-229ENST00000486665 ZSCAN25Q6NSZ9 544 aa15.42■□□□□ 0.06
HDAC6-229ENST00000486665 KRT26Q7Z3Y9 468 aa15.42■□□□□ 0.06
HDAC6-229ENST00000486665 OSBP2Q969R2 916 aa15.42■□□□□ 0.06
HDAC6-229ENST00000486665 SEC62Q99442 399 aaKnown RBP15.42■□□□□ 0.06
HDAC6-229ENST00000486665 PCDHAC2Q9Y5I4 1007 aa15.42■□□□□ 0.06
HDAC6-229ENST00000486665 CDC45O75419 566 aa15.41■□□□□ 0.06
HDAC6-229ENST00000486665 ZFYP08048 801 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-229ENST00000486665 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
HDAC6-229ENST00000486665 RPS12P25398 132 aaKnown RBP15.41■□□□□ 0.06
HDAC6-229ENST00000486665 ZMYM1Q5SVZ6 1142 aa15.41■□□□□ 0.06
HDAC6-229ENST00000486665 TICAM2Q86XR7 235 aa15.41■□□□□ 0.06
HDAC6-229ENST00000486665 PUS7LQ9H0K6 701 aaKnown RBP15.41■□□□□ 0.06
HDAC6-229ENST00000486665 RFX7Q2KHR2 1363 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 A0A0D9SFI3 127 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 M0R2C6 588 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 IGSF3O75054 1194 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 CRKP46108 304 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 GSTO1P78417 241 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 LRRFIP1Q32MZ4 808 aaKnown RBP15.4■□□□□ 0.06
HDAC6-229ENST00000486665 CWC27Q6UX04 472 aaKnown RBP15.4■□□□□ 0.06
HDAC6-229ENST00000486665 APPBP2Q92624 585 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 FAM163AQ96GL9 167 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-229ENST00000486665 MRIQ9BWK5 157 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 IL25Q9H293 177 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 GBA2Q9HCG7 927 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-229ENST00000486665 DIAPH3Q9NSV4 1193 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 DOCK2Q92608 1830 aa15.4■□□□□ 0.06
HDAC6-229ENST00000486665 HIP1O00291 1037 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 LDHCP07864 332 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-229ENST00000486665 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
HDAC6-229ENST00000486665 HDLBPQ00341 1268 aaKnown RBP15.39■□□□□ 0.05
HDAC6-229ENST00000486665 NOGQ13253 232 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 KIF4BQ2VIQ3 1234 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 CFAP100Q494V2 611 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 RGMBQ6NW40 437 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 HHIPL2Q6UWX4 724 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 CCDC129Q6ZRS4 1044 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 MIGA1Q8NAN2 632 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 GGA3Q9NZ52 723 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 DAGLAQ9Y4D2 1042 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 MROH7-TTC4A0A0A0MT08 1334 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 GAKO14976 1311 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 MAST3O60307 1309 aa15.39■□□□□ 0.05
HDAC6-229ENST00000486665 GPR75-ASB3A0A0A6YYF3 556 aa15.38■□□□□ 0.05
HDAC6-229ENST00000486665 CA12O43570 354 aa15.38■□□□□ 0.05
HDAC6-229ENST00000486665 RGS19P49795 217 aa15.38■□□□□ 0.05
HDAC6-229ENST00000486665 MCMDC2Q4G0Z9 681 aa15.38■□□□□ 0.05
HDAC6-229ENST00000486665 APOBEC3HQ6NTF7 200 aaKnown RBP15.38■□□□□ 0.05
HDAC6-229ENST00000486665 TEKT1Q969V4 418 aa15.38■□□□□ 0.05
HDAC6-229ENST00000486665 HELLSQ9NRZ9 838 aa15.38■□□□□ 0.05
HDAC6-229ENST00000486665 SERPINA10Q9UK55 444 aa15.38■□□□□ 0.05
HDAC6-229ENST00000486665 HDAC9Q9UKV0 1011 aa15.38■□□□□ 0.05
HDAC6-229ENST00000486665 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
HDAC6-229ENST00000486665 RBM5P52756 815 aaKnown RBP eCLIP15.37■□□□□ 0.05
HDAC6-229ENST00000486665 PPP4CP60510 307 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-229ENST00000486665 DGKZQ13574 1117 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 C8orf34Q49A92 452 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 TMED8Q6PL24 325 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-229ENST00000486665 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-229ENST00000486665 SLF2Q8IX21 1173 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 OGFOD1Q8N543 542 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 DCPSQ96C86 337 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms