RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 MOB2Q70IA6 237 aa22.24■■□□□ 1.15
COL1A1-207ENST00000486572 ZNF384Q8TF68 577 aa22.24■■□□□ 1.15
COL1A1-207ENST00000486572 NSUN4Q96CB9 384 aaKnown RBP22.24■■□□□ 1.15
COL1A1-207ENST00000486572 NBPF12Q5TAG4 269 aaPredicted RBP22.23■■□□□ 1.15
COL1A1-207ENST00000486572 FAM83AQ86UY5 434 aa22.23■■□□□ 1.15
COL1A1-207ENST00000486572 TMEM39BQ9GZU3 492 aa22.23■■□□□ 1.15
COL1A1-207ENST00000486572 IGSF3O75054 1194 aa22.22■■□□□ 1.15
COL1A1-207ENST00000486572 LDHCP07864 332 aa22.22■■□□□ 1.15
COL1A1-207ENST00000486572 BTDP43251 543 aa22.22■■□□□ 1.15
COL1A1-207ENST00000486572 PRKG1Q13976 671 aa22.22■■□□□ 1.15
COL1A1-207ENST00000486572 ARMC9Q7Z3E5 817 aa22.22■■□□□ 1.15
COL1A1-207ENST00000486572 TEPSINQ96N21 525 aa22.22■■□□□ 1.15
COL1A1-207ENST00000486572 USP40Q9NVE5 1235 aa22.22■■□□□ 1.15
COL1A1-207ENST00000486572 RPAP1Q9BWH6 1393 aaPredicted RBP22.22■■□□□ 1.15
COL1A1-207ENST00000486572 UBE2Q2LH0YL09 131 aa22.21■■□□□ 1.15
COL1A1-207ENST00000486572 SMARCA5O60264 1052 aaPredicted RBP22.21■■□□□ 1.15
COL1A1-207ENST00000486572 ZNF157P51786 506 aaPredicted RBP22.21■■□□□ 1.15
COL1A1-207ENST00000486572 PIH1D3Q9NQM4 214 aaKnown RBP22.21■■□□□ 1.15
COL1A1-207ENST00000486572 GPR75-ASB3A0A0A6YYF3 556 aa22.2■■□□□ 1.14
COL1A1-207ENST00000486572 PPP1R12BO60237 982 aaPredicted RBP22.2■■□□□ 1.14
COL1A1-207ENST00000486572 CDAN1Q8IWY9 1227 aa22.2■■□□□ 1.14
COL1A1-207ENST00000486572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.2■■□□□ 1.14
COL1A1-207ENST00000486572 CCDC102AQ96A19 550 aa22.2■■□□□ 1.14
COL1A1-207ENST00000486572 ANGEL1Q9UNK9 670 aaKnown RBP22.2■■□□□ 1.14
COL1A1-207ENST00000486572 NDUFB9Q9Y6M9 179 aa22.2■■□□□ 1.14
COL1A1-207ENST00000486572 MAP2K2P36507 400 aa22.19■■□□□ 1.14
COL1A1-207ENST00000486572 NFIAQ12857 509 aa22.19■■□□□ 1.14
COL1A1-207ENST00000486572 NOGQ13253 232 aa22.19■■□□□ 1.14
COL1A1-207ENST00000486572 MAP3K11Q16584 847 aa22.19■■□□□ 1.14
COL1A1-207ENST00000486572 NAA16Q6N069 864 aaPredicted RBP22.19■■□□□ 1.14
COL1A1-207ENST00000486572 EXOC6Q8TAG9 804 aa22.19■■□□□ 1.14
COL1A1-207ENST00000486572 FZD1Q9UP38 647 aa22.19■■□□□ 1.14
COL1A1-207ENST00000486572 RFX7Q2KHR2 1363 aa22.19■■□□□ 1.14
COL1A1-207ENST00000486572 DOCK2Q92608 1830 aa22.18■■□□□ 1.14
COL1A1-207ENST00000486572 FAM155AB1AL88 458 aaPredicted RBP22.18■■□□□ 1.14
COL1A1-207ENST00000486572 AOC2O75106 756 aa22.18■■□□□ 1.14
COL1A1-207ENST00000486572 SLC10A3P09131 477 aa22.18■■□□□ 1.14
COL1A1-207ENST00000486572 HDAC1Q13547 482 aaPredicted RBP22.18■■□□□ 1.14
COL1A1-207ENST00000486572 FAM151AQ8WW52 585 aa22.18■■□□□ 1.14
COL1A1-207ENST00000486572 IDH1O75874 414 aaKnown RBP22.17■■□□□ 1.14
COL1A1-207ENST00000486572 HSPA1AP0DMV8 641 aaKnown RBP22.17■■□□□ 1.14
COL1A1-207ENST00000486572 HSPA1BP0DMV9 641 aaKnown RBP22.17■■□□□ 1.14
COL1A1-207ENST00000486572 TCP10Q12799 353 aa22.17■■□□□ 1.14
COL1A1-207ENST00000486572 TTF1Q15361 905 aaPredicted RBP22.17■■□□□ 1.14
COL1A1-207ENST00000486572 LDLRAD1Q5T700 205 aa22.17■■□□□ 1.14
COL1A1-207ENST00000486572 RASAL3Q86YV0 1011 aa22.17■■□□□ 1.14
COL1A1-207ENST00000486572 HOOK2Q96ED9 719 aa22.17■■□□□ 1.14
COL1A1-207ENST00000486572 NOL10Q9BSC4 688 aaKnown RBP22.17■■□□□ 1.14
COL1A1-207ENST00000486572 IDI2Q9BXS1 227 aa22.17■■□□□ 1.14
COL1A1-207ENST00000486572 ANTXR1Q9H6X2 564 aa22.17■■□□□ 1.14
COL1A1-207ENST00000486572 FAM198AQ9UFP1 575 aa22.17■■□□□ 1.14
COL1A1-207ENST00000486572 MYO5AQ9Y4I1 1855 aaKnown RBP22.17■■□□□ 1.14
COL1A1-207ENST00000486572 MAP4K4O95819 1239 aaPredicted RBP22.16■■□□□ 1.14
COL1A1-207ENST00000486572 ATP5JP18859 108 aa22.16■■□□□ 1.14
COL1A1-207ENST00000486572 IREB2P48200 963 aaKnown RBP22.16■■□□□ 1.14
COL1A1-207ENST00000486572 RHBDL3P58872 404 aa22.16■■□□□ 1.14
COL1A1-207ENST00000486572 MAP2K1Q02750 393 aaPredicted RBP22.16■■□□□ 1.14
COL1A1-207ENST00000486572 DNAJC2Q99543 621 aaKnown RBP22.16■■□□□ 1.14
COL1A1-207ENST00000486572 UNCXA6NJT0 531 aa22.15■■□□□ 1.14
COL1A1-207ENST00000486572 ENTPD3O75355 529 aa22.15■■□□□ 1.14
COL1A1-207ENST00000486572 USP2O75604 605 aaPredicted RBP22.15■■□□□ 1.14
COL1A1-207ENST00000486572 WDHD1O75717 1129 aaPredicted RBP22.15■■□□□ 1.14
COL1A1-207ENST00000486572 RGS3P49796 1198 aa22.15■■□□□ 1.14
COL1A1-207ENST00000486572 MAP3K12Q12852 859 aa22.15■■□□□ 1.14
COL1A1-207ENST00000486572 PCNTO95613 3336 aa22.14■■□□□ 1.13
COL1A1-207ENST00000486572 BAG3O95817 575 aa22.14■■□□□ 1.13
COL1A1-207ENST00000486572 TMED8Q6PL24 325 aaPredicted RBP22.14■■□□□ 1.13
COL1A1-207ENST00000486572 ADGRA1Q86SQ6 560 aa22.14■■□□□ 1.13
COL1A1-207ENST00000486572 GCC1Q96CN9 775 aa22.14■■□□□ 1.13
COL1A1-207ENST00000486572 GPATCH3Q96I76 525 aa22.14■■□□□ 1.13
COL1A1-207ENST00000486572 BOLA2Q9H3K6 86 aa22.14■■□□□ 1.13
COL1A1-207ENST00000486572 ECHDC1Q9NTX5 307 aa22.14■■□□□ 1.13
COL1A1-207ENST00000486572 WBP1LQ9NX94 342 aa22.14■■□□□ 1.13
COL1A1-207ENST00000486572 OTOFQ9HC10 1997 aa22.13■■□□□ 1.13
COL1A1-207ENST00000486572 GOLIM4O00461 696 aa22.13■■□□□ 1.13
COL1A1-207ENST00000486572 PICALMQ13492 652 aa22.13■■□□□ 1.13
COL1A1-207ENST00000486572 ANKRD13AQ8IZ07 590 aa22.13■■□□□ 1.13
COL1A1-207ENST00000486572 AATFQ9NY61 560 aaKnown RBP eCLIP22.13■■□□□ 1.13
COL1A1-207ENST00000486572 PLCG2P16885 1265 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 CYP7A1P22680 504 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 DCAF15Q66K64 600 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 ZFPM1Q8IX07 1006 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 MAGEB6Q8N7X4 407 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 AIDAQ96BJ3 306 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 ZIC5Q96T25 663 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 HAUS7Q99871 368 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 DDX4Q9NQI0 724 aaKnown RBP22.12■■□□□ 1.13
COL1A1-207ENST00000486572 PAG1Q9NWQ8 432 aa22.12■■□□□ 1.13
COL1A1-207ENST00000486572 NPM3O75607 178 aaKnown RBP22.11■■□□□ 1.13
COL1A1-207ENST00000486572 PPP4CP60510 307 aa22.11■■□□□ 1.13
COL1A1-207ENST00000486572 KIF23Q02241 960 aaPredicted RBP22.11■■□□□ 1.13
COL1A1-207ENST00000486572 TEX11Q8IYF3 940 aa22.11■■□□□ 1.13
COL1A1-207ENST00000486572 SH3RF3Q8TEJ3 882 aaPredicted RBP22.11■■□□□ 1.13
COL1A1-207ENST00000486572 CLMNQ96JQ2 1002 aa22.11■■□□□ 1.13
COL1A1-207ENST00000486572 RWDD1Q9H446 243 aaPredicted RBP22.11■■□□□ 1.13
COL1A1-207ENST00000486572 ZBTB47Q9UFB7 747 aaPredicted RBP22.11■■□□□ 1.13
COL1A1-207ENST00000486572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.1■■□□□ 1.13
COL1A1-207ENST00000486572 SLC10A4Q96EP9 437 aa22.1■■□□□ 1.13
COL1A1-207ENST00000486572 EDC3Q96F86 508 aaKnown RBP22.1■■□□□ 1.13
COL1A1-207ENST00000486572 BEGAINQ9BUH8 593 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms