RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PITPNM2Q9BZ72 1349 aa10.9□□□□□ -0.66
COL12A1-208ENST00000486533 K7ELQ4 463 aaPredicted RBP10.9□□□□□ -0.67
COL12A1-208ENST00000486533 SASH1O94885 1247 aa10.9□□□□□ -0.67
COL12A1-208ENST00000486533 BICC1Q9H694 974 aaKnown RBP10.9□□□□□ -0.67
COL12A1-208ENST00000486533 HDAC9Q9UKV0 1011 aa10.9□□□□□ -0.67
COL12A1-208ENST00000486533 UTYO14607 1347 aa10.89□□□□□ -0.67
COL12A1-208ENST00000486533 WNT10BO00744 389 aa10.89□□□□□ -0.67
COL12A1-208ENST00000486533 ZNF157P51786 506 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-208ENST00000486533 NOGQ13253 232 aa10.89□□□□□ -0.67
COL12A1-208ENST00000486533 RGMBQ6NW40 437 aa10.89□□□□□ -0.67
COL12A1-208ENST00000486533 ANKRD44Q8N8A2 993 aa10.89□□□□□ -0.67
COL12A1-208ENST00000486533 KAZALD1Q96I82 304 aa10.89□□□□□ -0.67
COL12A1-208ENST00000486533 TMEM121BQ9BXQ6 578 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-208ENST00000486533 DCTPP1Q9H773 170 aa10.89□□□□□ -0.67
COL12A1-208ENST00000486533 TSKSQ9UJT2 592 aa10.89□□□□□ -0.67
COL12A1-208ENST00000486533 IRS2Q9Y4H2 1338 aa10.88□□□□□ -0.67
COL12A1-208ENST00000486533 FSD2A1L4K1 749 aa10.88□□□□□ -0.67
COL12A1-208ENST00000486533 REC8O95072 547 aa10.88□□□□□ -0.67
COL12A1-208ENST00000486533 NUCB2P80303 420 aa10.88□□□□□ -0.67
COL12A1-208ENST00000486533 TBC1D9Q6ZT07 1266 aa10.88□□□□□ -0.67
COL12A1-208ENST00000486533 C15orf52Q6ZUT6 534 aaKnown RBP10.88□□□□□ -0.67
COL12A1-208ENST00000486533 PUS3Q9BZE2 481 aaKnown RBP10.88□□□□□ -0.67
COL12A1-208ENST00000486533 JAG2Q9Y219 1238 aa10.88□□□□□ -0.67
COL12A1-208ENST00000486533 F8W031 263 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-208ENST00000486533 IL1R1P14778 569 aa10.87□□□□□ -0.67
COL12A1-208ENST00000486533 MMP14P50281 582 aa10.87□□□□□ -0.67
COL12A1-208ENST00000486533 RAB3GAP1Q15042 981 aa10.87□□□□□ -0.67
COL12A1-208ENST00000486533 PRAMEF18Q5VWM3 479 aa10.87□□□□□ -0.67
COL12A1-208ENST00000486533 ANP32BQ92688 251 aaKnown RBP10.87□□□□□ -0.67
COL12A1-208ENST00000486533 CCDC102AQ96A19 550 aa10.87□□□□□ -0.67
COL12A1-208ENST00000486533 ZIC5Q96T25 663 aa10.87□□□□□ -0.67
COL12A1-208ENST00000486533 PAPPA2Q9BXP8 1791 aa10.87□□□□□ -0.67
COL12A1-208ENST00000486533 MROH5Q6ZUA9 1318 aa10.87□□□□□ -0.67
COL12A1-208ENST00000486533 CA12O43570 354 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 DDIT3P35638 169 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 UBE4AQ14139 1066 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 TTLL12Q14166 644 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-208ENST00000486533 DLGAP5Q15398 846 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 RABL6Q3YEC7 729 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-208ENST00000486533 TTC22Q5TAA0 569 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 CERS5Q8N5B7 392 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 USP44Q9H0E7 712 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 CWC22Q9HCG8 908 aaKnown RBP10.86□□□□□ -0.67
COL12A1-208ENST00000486533 RTN4Q9NQC3 1192 aaKnown RBP10.86□□□□□ -0.67
COL12A1-208ENST00000486533 FAM155AB1AL88 458 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-208ENST00000486533 MCCP23508 829 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 NF2P35240 595 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 GYG1P46976 350 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 FKBP1BP68106 108 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 METTL24Q5JXM2 366 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 VPS37DQ86XT2 251 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 APOBEC3FQ8IUX4 373 aaKnown RBP10.86□□□□□ -0.67
COL12A1-208ENST00000486533 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
COL12A1-208ENST00000486533 SLC10A3P09131 477 aa10.85□□□□□ -0.67
COL12A1-208ENST00000486533 HIBADHP31937 336 aaKnown RBP10.85□□□□□ -0.67
COL12A1-208ENST00000486533 MCM2P49736 904 aa10.85□□□□□ -0.67
COL12A1-208ENST00000486533 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL12A1-208ENST00000486533 KIF23Q02241 960 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-208ENST00000486533 LRRC24Q50LG9 513 aa10.85□□□□□ -0.67
COL12A1-208ENST00000486533 CLEC17AQ6ZS10 378 aa10.85□□□□□ -0.67
COL12A1-208ENST00000486533 MOB2Q70IA6 237 aa10.85□□□□□ -0.67
COL12A1-208ENST00000486533 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
COL12A1-208ENST00000486533 KLHDC4Q8TBB5 520 aa10.85□□□□□ -0.67
COL12A1-208ENST00000486533 ECM29Q5VYK3 1845 aa10.84□□□□□ -0.67
COL12A1-208ENST00000486533 MYO1BO43795 1136 aa10.84□□□□□ -0.67
COL12A1-208ENST00000486533 UBTFL1P0CB47 393 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-208ENST00000486533 MFSD14BQ5SR56 506 aa10.84□□□□□ -0.67
COL12A1-208ENST00000486533 PLEKHM2Q8IWE5 1019 aa10.84□□□□□ -0.67
COL12A1-208ENST00000486533 ZBED3Q96IU2 234 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-208ENST00000486533 FAM84BQ96KN1 310 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-208ENST00000486533 CASP8AP2Q9UKL3 1982 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 UBE2Q2LH0YL09 131 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 GNAI3P08754 354 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 FKBP1AP62942 108 aaKnown RBP10.83□□□□□ -0.68
COL12A1-208ENST00000486533 PRKG1Q13976 671 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 CFAP100Q494V2 611 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 CAVIN4Q5BKX8 364 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 RASAL3Q86YV0 1011 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 CDAN1Q8IWY9 1227 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 TDRD7Q8NHU6 1098 aaKnown RBP10.83□□□□□ -0.68
COL12A1-208ENST00000486533 TNPO1Q92973 898 aaKnown RBP10.83□□□□□ -0.68
COL12A1-208ENST00000486533 C1orf115Q9H7X2 142 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 VEZTQ9HBM0 779 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 IQSEC3Q9UPP2 1182 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-208ENST00000486533 PCDHAC2Q9Y5I4 1007 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 AKAP11Q9UKA4 1901 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 FAM205AQ6ZU69 1335 aa10.83□□□□□ -0.68
COL12A1-208ENST00000486533 ARAP2Q8WZ64 1704 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 CLRN2A0PK11 232 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 EPB41L2O43491 1005 aaKnown RBP10.82□□□□□ -0.68
COL12A1-208ENST00000486533 PDE8BO95263 885 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 CEP85Q6P2H3 762 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 TRIM44Q96DX7 344 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-208ENST00000486533 DEFB129Q9H1M3 183 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 GRPEL1Q9HAV7 217 aa10.82□□□□□ -0.68
COL12A1-208ENST00000486533 TTF2Q9UNY4 1162 aaKnown RBP10.82□□□□□ -0.68
COL12A1-208ENST00000486533 COL1A1P02452 1464 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-208ENST00000486533 CHAF1AQ13111 956 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-208ENST00000486533 PUM3Q15397 648 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms