RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 CDAN1Q8IWY9 1227 aa27.1■■□□□ 1.93
HLA-F-228ENST00000486194 CFHR5Q9BXR6 569 aa27.1■■□□□ 1.93
HLA-F-228ENST00000486194 CSADQ9Y600 493 aa27.1■■□□□ 1.93
HLA-F-228ENST00000486194 DCAF15Q66K64 600 aa27.09■■□□□ 1.93
HLA-F-228ENST00000486194 CDC42EP5Q6NZY7 148 aa27.09■■□□□ 1.93
HLA-F-228ENST00000486194 FAM151AQ8WW52 585 aa27.09■■□□□ 1.93
HLA-F-228ENST00000486194 GPR108Q9NPR9 543 aa27.09■■□□□ 1.93
HLA-F-228ENST00000486194 ABCF2Q9UG63 623 aa27.09■■□□□ 1.93
HLA-F-228ENST00000486194 TBC1D8O95759 1140 aa27.08■■□□□ 1.93
HLA-F-228ENST00000486194 OTUD7BQ6GQQ9 843 aa27.08■■□□□ 1.93
HLA-F-228ENST00000486194 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.08■■□□□ 1.93
HLA-F-228ENST00000486194 C1orf115Q9H7X2 142 aa27.08■■□□□ 1.93
HLA-F-228ENST00000486194 ELP3Q9H9T3 547 aa27.08■■□□□ 1.93
HLA-F-228ENST00000486194 SURF6O75683 361 aaKnown RBP27.07■■□□□ 1.92
HLA-F-228ENST00000486194 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.07■■□□□ 1.92
HLA-F-228ENST00000486194 IFNL1Q8IU54 200 aa27.07■■□□□ 1.92
HLA-F-228ENST00000486194 OPTNQ96CV9 577 aa27.07■■□□□ 1.92
HLA-F-228ENST00000486194 USP40Q9NVE5 1235 aa27.07■■□□□ 1.92
HLA-F-228ENST00000486194 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.07■■□□□ 1.92
HLA-F-228ENST00000486194 UQCRFS1P1P0C7P4 283 aa27.06■■□□□ 1.92
HLA-F-228ENST00000486194 ARID4AP29374 1257 aaPredicted RBP27.06■■□□□ 1.92
HLA-F-228ENST00000486194 ERICH6Q7L0X2 663 aa27.06■■□□□ 1.92
HLA-F-228ENST00000486194 VGLL4Q14135 290 aa27.05■■□□□ 1.92
HLA-F-228ENST00000486194 CTU1Q7Z7A3 348 aaKnown RBP27.05■■□□□ 1.92
HLA-F-228ENST00000486194 SPATA5Q8NB90 893 aa27.05■■□□□ 1.92
HLA-F-228ENST00000486194 FAM163AQ96GL9 167 aaPredicted RBP27.05■■□□□ 1.92
HLA-F-228ENST00000486194 HMG20BQ9P0W2 317 aa27.05■■□□□ 1.92
HLA-F-228ENST00000486194 GAKO14976 1311 aa27.05■■□□□ 1.92
HLA-F-228ENST00000486194 GPR25O00155 361 aa27.04■■□□□ 1.92
HLA-F-228ENST00000486194 WRNIP1Q96S55 665 aa27.04■■□□□ 1.92
HLA-F-228ENST00000486194 NOP58Q9Y2X3 529 aaKnown RBP27.04■■□□□ 1.92
HLA-F-228ENST00000486194 GJA5P36382 358 aa27.03■■□□□ 1.92
HLA-F-228ENST00000486194 TCP10Q12799 353 aa27.03■■□□□ 1.92
HLA-F-228ENST00000486194 TNNI3KQ59H18 835 aa27.03■■□□□ 1.92
HLA-F-228ENST00000486194 PANK1Q8TE04 598 aa27.03■■□□□ 1.92
HLA-F-228ENST00000486194 ZNF296Q8WUU4 475 aaPredicted RBP27.03■■□□□ 1.92
HLA-F-228ENST00000486194 ZNF341Q9BYN7 854 aa27.03■■□□□ 1.92
HLA-F-228ENST00000486194 FPGT-TNNI3KV9GXZ4 949 aa27.03■■□□□ 1.92
HLA-F-228ENST00000486194 CCDC85CA6NKD9 419 aa27.02■■□□□ 1.92
HLA-F-228ENST00000486194 GSTO1P78417 241 aa27.02■■□□□ 1.92
HLA-F-228ENST00000486194 CCDC158Q5M9N0 1113 aa27.02■■□□□ 1.92
HLA-F-228ENST00000486194 OTOFQ9HC10 1997 aa27.01■■□□□ 1.91
HLA-F-228ENST00000486194 TESPA1A2RU30 521 aaPredicted RBP27.01■■□□□ 1.91
HLA-F-228ENST00000486194 LDHCP07864 332 aa27.01■■□□□ 1.91
HLA-F-228ENST00000486194 GTF2A2P52657 109 aa27.01■■□□□ 1.91
HLA-F-228ENST00000486194 NFIAQ12857 509 aa27.01■■□□□ 1.91
HLA-F-228ENST00000486194 ERO1BQ86YB8 467 aa27.01■■□□□ 1.91
HLA-F-228ENST00000486194 IDI2Q9BXS1 227 aa27.01■■□□□ 1.91
HLA-F-228ENST00000486194 LAMB1P07942 1786 aa27.01■■□□□ 1.91
HLA-F-228ENST00000486194 MROH7-TTC4A0A0A0MT08 1334 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 SPDYE5A6NIY4 337 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 IGF2BP3O00425 579 aaKnown RBP eCLIP27■■□□□ 1.91
HLA-F-228ENST00000486194 FKTNO75072 461 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 ENTPD3O75355 529 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 MECOMQ03112 1051 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 PKN2Q16513 984 aaKnown RBP27■■□□□ 1.91
HLA-F-228ENST00000486194 TTC39AQ5SRH9 613 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 CEP85Q6P2H3 762 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 CHMP4BQ9H444 224 aaKnown RBP27■■□□□ 1.91
HLA-F-228ENST00000486194 FAM198AQ9UFP1 575 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 RCAN3Q9UKA8 241 aa27■■□□□ 1.91
HLA-F-228ENST00000486194 MCAMP43121 646 aa26.99■■□□□ 1.91
HLA-F-228ENST00000486194 MIGA2Q7L4E1 593 aa26.99■■□□□ 1.91
HLA-F-228ENST00000486194 OTUD5Q96G74 571 aa26.99■■□□□ 1.91
HLA-F-228ENST00000486194 MAP4K4O95819 1239 aaPredicted RBP26.98■■□□□ 1.91
HLA-F-228ENST00000486194 BTDP43251 543 aa26.98■■□□□ 1.91
HLA-F-228ENST00000486194 PI16Q6UXB8 463 aa26.98■■□□□ 1.91
HLA-F-228ENST00000486194 ERC1Q8IUD2 1116 aa26.98■■□□□ 1.91
HLA-F-228ENST00000486194 MS4A4AQ96JQ5 239 aa26.98■■□□□ 1.91
HLA-F-228ENST00000486194 RAI14Q9P0K7 980 aa26.98■■□□□ 1.91
HLA-F-228ENST00000486194 DDX19BQ9UMR2 479 aa26.98■■□□□ 1.91
HLA-F-228ENST00000486194 SNCAIPQ9Y6H5 919 aa26.98■■□□□ 1.91
HLA-F-228ENST00000486194 GPR75-ASB3A0A0A6YYF3 556 aa26.97■■□□□ 1.91
HLA-F-228ENST00000486194 RGS3P49796 1198 aa26.97■■□□□ 1.91
HLA-F-228ENST00000486194 HSP90AB4PQ58FF6 505 aa26.97■■□□□ 1.91
HLA-F-228ENST00000486194 ZKSCAN4Q969J2 545 aaPredicted RBP26.97■■□□□ 1.91
HLA-F-228ENST00000486194 ZNF512BQ96KM6 892 aaPredicted RBP26.97■■□□□ 1.91
HLA-F-228ENST00000486194 DBNDD2Q9BQY9 259 aa26.97■■□□□ 1.91
HLA-F-228ENST00000486194 LRP2BPQ9P2M1 347 aa26.97■■□□□ 1.91
HLA-F-228ENST00000486194 MYH2Q9UKX2 1941 aa26.96■■□□□ 1.91
HLA-F-228ENST00000486194 CCL15-CCL14A0A0B4J2E2 113 aa26.96■■□□□ 1.91
HLA-F-228ENST00000486194 IGSF3O75054 1194 aa26.96■■□□□ 1.91
HLA-F-228ENST00000486194 CCL15Q16663 113 aa26.96■■□□□ 1.91
HLA-F-228ENST00000486194 CNKSR2Q8WXI2 1034 aa26.96■■□□□ 1.91
HLA-F-228ENST00000486194 NSUN4Q96CB9 384 aaKnown RBP26.96■■□□□ 1.91
HLA-F-228ENST00000486194 ZNF112Q9UJU3 913 aa26.96■■□□□ 1.91
HLA-F-228ENST00000486194 TBC1D9Q6ZT07 1266 aa26.95■■□□□ 1.9
HLA-F-228ENST00000486194 ZSCAN29Q8IWY8 852 aaPredicted RBP26.95■■□□□ 1.9
HLA-F-228ENST00000486194 PTPN18Q99952 460 aa26.95■■□□□ 1.9
HLA-F-228ENST00000486194 R3HDMLQ9H3Y0 253 aa26.95■■□□□ 1.9
HLA-F-228ENST00000486194 WDHD1O75717 1129 aaPredicted RBP26.94■■□□□ 1.9
HLA-F-228ENST00000486194 CETPP11597 493 aa26.94■■□□□ 1.9
HLA-F-228ENST00000486194 PPATQ06203 517 aa26.94■■□□□ 1.9
HLA-F-228ENST00000486194 PPIL2Q13356 520 aa26.94■■□□□ 1.9
HLA-F-228ENST00000486194 RFX7Q2KHR2 1363 aa26.94■■□□□ 1.9
HLA-F-228ENST00000486194 NPM3O75607 178 aaKnown RBP26.93■■□□□ 1.9
HLA-F-228ENST00000486194 CRHR2Q13324 411 aa26.93■■□□□ 1.9
HLA-F-228ENST00000486194 SNAPC2Q13487 334 aa26.93■■□□□ 1.9
HLA-F-228ENST00000486194 RPAP2Q8IXW5 612 aaPredicted RBP26.93■■□□□ 1.9
HLA-F-228ENST00000486194 BRI3BPQ8WY22 251 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms