RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 FAM151AQ8WW52 585 aa22.69■■□□□ 1.22
PRPF40A-209ENST00000486100 FAM163AQ96GL9 167 aaPredicted RBP22.69■■□□□ 1.22
PRPF40A-209ENST00000486100 USP40Q9NVE5 1235 aa22.69■■□□□ 1.22
PRPF40A-209ENST00000486100 HMG20BQ9P0W2 317 aa22.69■■□□□ 1.22
PRPF40A-209ENST00000486100 TBC1D8O95759 1140 aa22.68■■□□□ 1.22
PRPF40A-209ENST00000486100 ARID4AP29374 1257 aaPredicted RBP22.68■■□□□ 1.22
PRPF40A-209ENST00000486100 DZIP1Q86YF9 867 aaKnown RBP22.68■■□□□ 1.22
PRPF40A-209ENST00000486100 SLF2Q8IX21 1173 aa22.68■■□□□ 1.22
PRPF40A-209ENST00000486100 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.68■■□□□ 1.22
PRPF40A-209ENST00000486100 MCOLN1Q9GZU1 580 aa22.68■■□□□ 1.22
PRPF40A-209ENST00000486100 ALDH1A1P00352 501 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 UQCRFS1P1P0C7P4 283 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 GJA5P36382 358 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 DGKZQ13574 1117 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 TNNI3KQ59H18 835 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 CEP85Q6P2H3 762 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 ERICH6Q7L0X2 663 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 SPATA5Q8NB90 893 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 CFHR5Q9BXR6 569 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 ELP3Q9H9T3 547 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 FPGT-TNNI3KV9GXZ4 949 aa22.67■■□□□ 1.22
PRPF40A-209ENST00000486100 GAKO14976 1311 aa22.66■■□□□ 1.22
PRPF40A-209ENST00000486100 NFIAQ12857 509 aa22.66■■□□□ 1.22
PRPF40A-209ENST00000486100 IFNL1Q8IU54 200 aa22.66■■□□□ 1.22
PRPF40A-209ENST00000486100 OPTNQ96CV9 577 aa22.66■■□□□ 1.22
PRPF40A-209ENST00000486100 RCAN3Q9UKA8 241 aa22.66■■□□□ 1.22
PRPF40A-209ENST00000486100 CSADQ9Y600 493 aa22.66■■□□□ 1.22
PRPF40A-209ENST00000486100 RPAP1Q9BWH6 1393 aaPredicted RBP22.65■■□□□ 1.22
PRPF40A-209ENST00000486100 TCP10Q12799 353 aa22.65■■□□□ 1.22
PRPF40A-209ENST00000486100 VGLL4Q14135 290 aa22.65■■□□□ 1.22
PRPF40A-209ENST00000486100 NOM1Q5C9Z4 860 aaKnown RBP22.65■■□□□ 1.22
PRPF40A-209ENST00000486100 DCAF15Q66K64 600 aa22.65■■□□□ 1.22
PRPF40A-209ENST00000486100 FAM198AQ9UFP1 575 aa22.65■■□□□ 1.22
PRPF40A-209ENST00000486100 MCAMP43121 646 aa22.64■■□□□ 1.21
PRPF40A-209ENST00000486100 MECOMQ03112 1051 aa22.64■■□□□ 1.21
PRPF40A-209ENST00000486100 CCDC158Q5M9N0 1113 aa22.64■■□□□ 1.21
PRPF40A-209ENST00000486100 PI16Q6UXB8 463 aa22.64■■□□□ 1.21
PRPF40A-209ENST00000486100 IDI2Q9BXS1 227 aa22.64■■□□□ 1.21
PRPF40A-209ENST00000486100 AKAP11Q9UKA4 1901 aa22.64■■□□□ 1.21
PRPF40A-209ENST00000486100 CASP8AP2Q9UKL3 1982 aa22.63■■□□□ 1.21
PRPF40A-209ENST00000486100 TESPA1A2RU30 521 aaPredicted RBP22.63■■□□□ 1.21
PRPF40A-209ENST00000486100 GPR25O00155 361 aa22.63■■□□□ 1.21
PRPF40A-209ENST00000486100 TBC1D9Q6ZT07 1266 aa22.63■■□□□ 1.21
PRPF40A-209ENST00000486100 MIGA2Q7L4E1 593 aa22.63■■□□□ 1.21
PRPF40A-209ENST00000486100 WRNIP1Q96S55 665 aa22.63■■□□□ 1.21
PRPF40A-209ENST00000486100 DBNDD2Q9BQY9 259 aa22.63■■□□□ 1.21
PRPF40A-209ENST00000486100 ZNF341Q9BYN7 854 aa22.63■■□□□ 1.21
PRPF40A-209ENST00000486100 IGF2BP3O00425 579 aaKnown RBP eCLIP22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 LDHCP07864 332 aa22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 TTC39AQ5SRH9 613 aa22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 OTUD7BQ6GQQ9 843 aa22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 ZNF296Q8WUU4 475 aaPredicted RBP22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 R3HDMLQ9H3Y0 253 aa22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 DDX19BQ9UMR2 479 aa22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 COG6Q9Y2V7 657 aa22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 MYH13Q9UKX3 1938 aa22.62■■□□□ 1.21
PRPF40A-209ENST00000486100 MROH7-TTC4A0A0A0MT08 1334 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 GPR75-ASB3A0A0A6YYF3 556 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 ENTPD3O75355 529 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 BTDP43251 543 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 GSTO1P78417 241 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 CTU1Q7Z7A3 348 aaKnown RBP22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 ZFPM1Q8IX07 1006 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 ZNF384Q8TF68 577 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 CNKSR2Q8WXI2 1034 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 ZKSCAN4Q969J2 545 aaPredicted RBP22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 NSUN4Q96CB9 384 aaKnown RBP22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 MS4A4AQ96JQ5 239 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 ZNF512BQ96KM6 892 aaPredicted RBP22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 SNCAIPQ9Y6H5 919 aa22.61■■□□□ 1.21
PRPF40A-209ENST00000486100 RGS3P49796 1198 aa22.6■■□□□ 1.21
PRPF40A-209ENST00000486100 GTF2A2P52657 109 aa22.6■■□□□ 1.21
PRPF40A-209ENST00000486100 PTPN18Q99952 460 aa22.6■■□□□ 1.21
PRPF40A-209ENST00000486100 ZBTB40Q9NUA8 1239 aa22.6■■□□□ 1.21
PRPF40A-209ENST00000486100 RAI14Q9P0K7 980 aa22.6■■□□□ 1.21
PRPF40A-209ENST00000486100 ZNF112Q9UJU3 913 aa22.6■■□□□ 1.21
PRPF40A-209ENST00000486100 SPDYE5A6NIY4 337 aa22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 CCDC85CA6NKD9 419 aa22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 ERO1BQ86YB8 467 aa22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 ERC1Q8IUD2 1116 aa22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 RPAP2Q8IXW5 612 aaPredicted RBP22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 EAF2Q96CJ1 260 aaPredicted RBP22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 OTUD5Q96G74 571 aa22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 CCDC8Q9H0W5 538 aaPredicted RBP22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 CHMP4BQ9H444 224 aaKnown RBP22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 SNRKQ9NRH2 765 aa22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 LRP2BPQ9P2M1 347 aa22.59■■□□□ 1.21
PRPF40A-209ENST00000486100 FKTNO75072 461 aa22.58■■□□□ 1.21
PRPF40A-209ENST00000486100 WDHD1O75717 1129 aaPredicted RBP22.58■■□□□ 1.21
PRPF40A-209ENST00000486100 MAP4K4O95819 1239 aaPredicted RBP22.58■■□□□ 1.21
PRPF40A-209ENST00000486100 RHBDL3P58872 404 aa22.58■■□□□ 1.21
PRPF40A-209ENST00000486100 HSP90AB4PQ58FF6 505 aa22.58■■□□□ 1.21
PRPF40A-209ENST00000486100 DBNLQ9UJU6 430 aaKnown RBP22.58■■□□□ 1.21
PRPF40A-209ENST00000486100 EXOC6BQ9Y2D4 811 aa22.58■■□□□ 1.21
PRPF40A-209ENST00000486100 INPP5BP32019 993 aa22.57■■□□□ 1.2
PRPF40A-209ENST00000486100 CCL15-CCL14A0A0B4J2E2 113 aa22.56■■□□□ 1.2
PRPF40A-209ENST00000486100 NPM3O75607 178 aaKnown RBP22.56■■□□□ 1.2
PRPF40A-209ENST00000486100 CYP2E1P05181 493 aaPredicted RBP22.56■■□□□ 1.2
PRPF40A-209ENST00000486100 CCL15Q16663 113 aa22.56■■□□□ 1.2
PRPF40A-209ENST00000486100 SH3BP5LQ7L8J4 393 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms