RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SBF1O95248 1867 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 HMMRO75330 724 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 SURF6O75683 361 aaKnown RBP6.98□□□□□ -1.29
COPS3-208ENST00000486032 RPS8P62241 208 aaKnown RBP6.98□□□□□ -1.29
COPS3-208ENST00000486032 RABL6Q3YEC7 729 aaPredicted RBP6.98□□□□□ -1.29
COPS3-208ENST00000486032 CRY2Q49AN0 593 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 LRRC24Q50LG9 513 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 DALRD3Q5D0E6 543 aaKnown RBP6.98□□□□□ -1.29
COPS3-208ENST00000486032 PRPF40BQ6NWY9 871 aaKnown RBP6.98□□□□□ -1.29
COPS3-208ENST00000486032 KANK3Q6NY19 840 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 BRICD5Q6PL45 260 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 LDHAL6AQ6ZMR3 332 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 HELBQ8NG08 1087 aaPredicted RBP6.98□□□□□ -1.29
COPS3-208ENST00000486032 CRAMP1Q96RY5 1269 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 EXOC6BQ9Y2D4 811 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 SLC27A5Q9Y2P5 690 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 SPEF2Q9C093 1822 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 FER1L6Q2WGJ9 1857 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 CCDC88AQ3V6T2 1871 aa6.98□□□□□ -1.29
COPS3-208ENST00000486032 KLRG2A4D1S0 409 aaPredicted RBP6.97□□□□□ -1.29
COPS3-208ENST00000486032 TAF5LO75529 589 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 YY1P25490 414 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 HOXA10P31260 410 aaPredicted RBP6.97□□□□□ -1.29
COPS3-208ENST00000486032 RFX5P48382 616 aaPredicted RBP6.97□□□□□ -1.29
COPS3-208ENST00000486032 WNT7BP56706 349 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 PTPN12Q05209 780 aaKnown RBP6.97□□□□□ -1.29
COPS3-208ENST00000486032 G3BP1Q13283 466 aaKnown RBP eCLIP6.97□□□□□ -1.29
COPS3-208ENST00000486032 E2F4Q16254 413 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 RIC1Q4ADV7 1423 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 METTL24Q5JXM2 366 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 SIRT2Q8IXJ6 389 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 RPAP2Q8IXW5 612 aaPredicted RBP6.97□□□□□ -1.29
COPS3-208ENST00000486032 DUOX1Q9NRD9 1551 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 NSFL1CQ9UNZ2 370 aaKnown RBP6.97□□□□□ -1.29
COPS3-208ENST00000486032 WASF2Q9Y6W5 498 aa6.97□□□□□ -1.29
COPS3-208ENST00000486032 LRRC37AA6NMS7 1700 aa6.96□□□□□ -1.29
COPS3-208ENST00000486032 WTIPA6NIX2 430 aaPredicted RBP6.96□□□□□ -1.3
COPS3-208ENST00000486032 C6orf229H3BNL8 230 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 EYA2O00167 538 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 BBOX1O75936 387 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 KCNJ4P48050 445 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 GPSM2P81274 684 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 ARHGAP27Q6ZUM4 889 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 ZNF784Q8NCA9 323 aaPredicted RBP6.96□□□□□ -1.3
COPS3-208ENST00000486032 SSH3Q8TE77 659 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 ZNF526Q8TF50 670 aaPredicted RBP6.96□□□□□ -1.3
COPS3-208ENST00000486032 C7orf43Q8WVR3 580 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 GPR101Q96P66 508 aaPredicted RBP6.96□□□□□ -1.3
COPS3-208ENST00000486032 RWDD1Q9H446 243 aaPredicted RBP6.96□□□□□ -1.3
COPS3-208ENST00000486032 ANKIB1Q9P2G1 1089 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 LTBP1Q14766 1721 aa6.96□□□□□ -1.3
COPS3-208ENST00000486032 SNAP23O00161 211 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 SMARCA5O60264 1052 aaPredicted RBP6.95□□□□□ -1.3
COPS3-208ENST00000486032 IGHDP01880 384 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 SKOR1P84550 965 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 CHRNDQ07001 517 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 FUT2Q10981 343 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 TFCP2Q12800 502 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 MTX1Q13505 466 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 CCDC93Q567U6 631 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 B4GALNT3Q6L9W6 998 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
COPS3-208ENST00000486032 SP8Q8IXZ3 490 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 MPNDQ8N594 471 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 CCDC136Q96JN2 1154 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 IL1RAPL2Q9NP60 686 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 BSDC1Q9NW68 430 aaPredicted RBP6.95□□□□□ -1.3
COPS3-208ENST00000486032 CEP126Q9P2H0 1117 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 MINPP1Q9UNW1 487 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 RTL9Q8NET4 1388 aa6.95□□□□□ -1.3
COPS3-208ENST00000486032 UFL1O94874 794 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 IL15P40933 162 aaPredicted RBP6.94□□□□□ -1.3
COPS3-208ENST00000486032 PTGDRQ13258 359 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 AAMPQ13685 434 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 SCARF1Q14162 830 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 C9orf131Q5VYM1 1079 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 ATG9AQ7Z3C6 839 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 NEUROD6Q96NK8 337 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 ANKRD2Q9GZV1 360 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 COPRSQ9NQ92 184 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 GGA1Q9UJY5 639 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 ATP6V0A2Q9Y487 856 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 GTF3C3Q9Y5Q9 886 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 MROH5Q6ZUA9 1318 aa6.94□□□□□ -1.3
COPS3-208ENST00000486032 A0A1B0GUL6 1792 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 SOBPA7XYQ1 873 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 CIAO1O76071 339 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 SASH1O94885 1247 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 ATP2B4P23634 1241 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 MMP16P51512 607 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 TIMM10P62072 90 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 HSP90AB4PQ58FF6 505 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 ANKRD45Q5TZF3 282 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 TMC4Q7Z404 712 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 RHPN1Q8TCX5 695 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 CCDC8Q9H0W5 538 aaPredicted RBP6.93□□□□□ -1.3
COPS3-208ENST00000486032 ZNF277Q9NRM2 450 aaPredicted RBP6.93□□□□□ -1.3
COPS3-208ENST00000486032 PPP4R2Q9NY27 417 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 RNF181Q9P0P0 153 aa6.93□□□□□ -1.3
COPS3-208ENST00000486032 RIPOR2Q9Y4F9 1068 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms