RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 HHIPL2Q6UWX4 724 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 FAM163AQ96GL9 167 aaPredicted RBP11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 HHIPL1Q96JK4 782 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 BOLA2Q9H3K6 86 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 ANTXR1Q9H6X2 564 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 GBA2Q9HCG7 927 aaPredicted RBP11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 PIH1D3Q9NQM4 214 aaKnown RBP11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 SNRKQ9NRH2 765 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 PAG1Q9NWQ8 432 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 TTF2Q9UNY4 1162 aaKnown RBP11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 NDUFB9Q9Y6M9 179 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 PITPNM2Q9BZ72 1349 aa11.34□□□□□ -0.59
SHROOM3-207ENST00000485780 RFX7Q2KHR2 1363 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 AOC2O75106 756 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 DLK2Q6UY11 383 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 TBC1D9Q6ZT07 1266 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 ERICH6Q7L0X2 663 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 TNS4Q8IZW8 715 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 NSUN4Q96CB9 384 aaKnown RBP11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 CDCA5Q96FF9 252 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 ZDHHC15Q96MV8 337 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
SHROOM3-207ENST00000485780 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 GOLIM4O00461 696 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 WNT10BO00744 389 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 MAP2K2P36507 400 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 CRKP46108 304 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 MECOMQ03112 1051 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 NBPF9Q3BBW0 867 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 TICAM2Q86XR7 235 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 TEKT1Q969V4 418 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 EDC3Q96F86 508 aaKnown RBP11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 ABCF2Q9UG63 623 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 DAGLAQ9Y4D2 1042 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 MROH7-TTC4A0A0A0MT08 1334 aa11.32□□□□□ -0.6
SHROOM3-207ENST00000485780 F8W031 263 aaPredicted RBP11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 DLGAP5Q15398 846 aa11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 DIXDC1Q155Q3 683 aa11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 CFAP100Q494V2 611 aa11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 APOBEC3HQ6NTF7 200 aaKnown RBP11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 KBTBD3Q8NAB2 608 aa11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 LRP2BPQ9P2M1 347 aa11.31□□□□□ -0.6
SHROOM3-207ENST00000485780 GPR75-ASB3A0A0A6YYF3 556 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 TCRBV5S4A2TA0A5A2 114 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 NF2P35240 595 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 ZNF157P51786 506 aaPredicted RBP11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 GSTO1P78417 241 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 MAP3K12Q12852 859 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 NOGQ13253 232 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 SPDYE2Q495Y8 402 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 TTC22Q5TAA0 569 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 RGMBQ6NW40 437 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 BCL11AQ9H165 835 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 THSD7BQ9C0I4 1608 aa11.3□□□□□ -0.6
SHROOM3-207ENST00000485780 MYO1BO43795 1136 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 MAP4K4O95819 1239 aaPredicted RBP11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 LDHCP07864 332 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 GSPT1P15170 499 aaKnown RBP11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 PDE6AP16499 860 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 ADD2P35612 726 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 RBM5P52756 815 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 LBX1P52954 281 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 UBE3CQ15386 1083 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 ADGRA1Q86SQ6 560 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 CCDC102AQ96A19 550 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 EVI5LQ96CN4 794 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 PRMT6Q96LA8 375 aaPredicted RBP11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
SHROOM3-207ENST00000485780 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 COL2A1P02458 1487 aaPredicted RBP11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 CA12O43570 354 aa11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 HSPA8P11142 646 aaKnown RBP11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 RHBDL3P58872 404 aa11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 PPP4CP60510 307 aa11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 FKBP1BP68106 108 aa11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 FKBP1CQ5VVH2 108 aa11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 NAA16Q6N069 864 aaPredicted RBP11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 SIPA1L1O43166 1804 aa11.28□□□□□ -0.6
SHROOM3-207ENST00000485780 MYH1P12882 1939 aa11.27□□□□□ -0.6
SHROOM3-207ENST00000485780 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 CYP7A1P22680 504 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 BTDP43251 543 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 SLC9C2Q5TAH2 1124 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 PRAMEF18Q5VWM3 479 aa11.27□□□□□ -0.61
SHROOM3-207ENST00000485780 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms